RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 TAL2Q16559 108 aa10.46□□□□□ -0.73
COL6A1-207ENST00000612273 C10orf105Q8TEF2 133 aa10.46□□□□□ -0.73
COL6A1-207ENST00000612273 KIF25-AS1Q9Y6Z4 181 aa10.46□□□□□ -0.73
COL6A1-207ENST00000612273 NDUFS8O00217 210 aa10.45□□□□□ -0.74
COL6A1-207ENST00000612273 LGALS3P17931 250 aaKnown RBP10.45□□□□□ -0.74
COL6A1-207ENST00000612273 SPXQ9BT56 116 aa10.45□□□□□ -0.74
COL6A1-207ENST00000612273 A0A0J9YXV3 536 aa10.45□□□□□ -0.74
COL6A1-207ENST00000612273 IGIPA6NJ69 53 aa10.45□□□□□ -0.74
COL6A1-207ENST00000612273 PRSS2P07478 247 aa10.45□□□□□ -0.74
COL6A1-207ENST00000612273 FN1P02751 2386 aaKnown RBP10.45□□□□□ -0.74
COL6A1-207ENST00000612273 A0A0J9YY99 117 aa10.45□□□□□ -0.74
COL6A1-207ENST00000612273 POLR2KP53803 58 aaKnown RBP10.45□□□□□ -0.74
COL6A1-207ENST00000612273 TMEM238LA0A1B0GVL6 79 aa10.44□□□□□ -0.74
COL6A1-207ENST00000612273 A6NJY4 79 aa10.44□□□□□ -0.74
COL6A1-207ENST00000612273 SYT8Q8NBV8 401 aa10.44□□□□□ -0.74
COL6A1-207ENST00000612273 KLLNB2CW77 178 aa10.44□□□□□ -0.74
COL6A1-207ENST00000612273 Q1RN00 199 aa10.44□□□□□ -0.74
COL6A1-207ENST00000612273 J3QQQ9 107 aa10.43□□□□□ -0.74
COL6A1-207ENST00000612273 SNRPD3P62318 126 aaKnown RBP10.43□□□□□ -0.74
COL6A1-207ENST00000612273 A8MZ25 164 aa10.43□□□□□ -0.74
COL6A1-207ENST00000612273 COX6B1P14854 86 aa10.43□□□□□ -0.74
COL6A1-207ENST00000612273 SMCPP49901 116 aaPredicted RBP10.43□□□□□ -0.74
COL6A1-207ENST00000612273 DLX4Q92988 240 aaPredicted RBP10.43□□□□□ -0.74
COL6A1-207ENST00000612273 IGHV3-38A0A0C4DH36 116 aa10.43□□□□□ -0.74
COL6A1-207ENST00000612273 C18orf65Q6ZTR6 163 aa10.43□□□□□ -0.74
COL6A1-207ENST00000612273 FAM19A4Q96LR4 140 aa10.43□□□□□ -0.74
COL6A1-207ENST00000612273 KLK9Q2XQG4 91 aa10.42□□□□□ -0.74
COL6A1-207ENST00000612273 NFE4Q86UQ8 179 aa10.42□□□□□ -0.74
COL6A1-207ENST00000612273 C11orf44Q8N8P7 122 aa10.42□□□□□ -0.74
COL6A1-207ENST00000612273 PRO0461Q9UI25 63 aa10.42□□□□□ -0.74
COL6A1-207ENST00000612273 IGHV3-16A0A0C4DH30 117 aa10.42□□□□□ -0.74
COL6A1-207ENST00000612273 PPP1R17O96001 155 aa10.42□□□□□ -0.74
COL6A1-207ENST00000612273 TCL1BO95988 128 aa10.41□□□□□ -0.74
COL6A1-207ENST00000612273 IGLV1-40P01703 118 aa10.41□□□□□ -0.74
COL6A1-207ENST00000612273 CFC1BP0CG36 223 aa10.41□□□□□ -0.74
COL6A1-207ENST00000612273 CFC1P0CG37 223 aa10.41□□□□□ -0.74
COL6A1-207ENST00000612273 NDUFA11Q86Y39 141 aa10.41□□□□□ -0.74
COL6A1-207ENST00000612273 IGHV3OR16-12A0A075B7B8 117 aa10.41□□□□□ -0.74
COL6A1-207ENST00000612273 TRAV8-3A0A0A6YYJ7 113 aa10.41□□□□□ -0.74
COL6A1-207ENST00000612273 A4D1N5 150 aa10.41□□□□□ -0.74
COL6A1-207ENST00000612273 IGHV4OR15-8A0A075B7B6 117 aa10.41□□□□□ -0.74
COL6A1-207ENST00000612273 IGHV1OR15-1A0A075B7D0 117 aa10.41□□□□□ -0.74
COL6A1-207ENST00000612273 A0A087WW49 117 aa10.41□□□□□ -0.74
COL6A1-207ENST00000612273 M0QY20 66 aa10.41□□□□□ -0.74
COL6A1-207ENST00000612273 NOTCH2Q04721 2471 aa10.4□□□□□ -0.74
COL6A1-207ENST00000612273 A0A0U1RRA0 63 aa10.4□□□□□ -0.74
COL6A1-207ENST00000612273 TRPT1Q86TN4 253 aaKnown RBP10.4□□□□□ -0.74
COL6A1-207ENST00000612273 VCX2Q9H322 139 aa10.4□□□□□ -0.74
COL6A1-207ENST00000612273 A0A0J9YX75 114 aa10.4□□□□□ -0.74
COL6A1-207ENST00000612273 DEFB131AP59861 70 aa10.4□□□□□ -0.74
COL6A1-207ENST00000612273 CRIP2P52943 208 aaPredicted RBP10.39□□□□□ -0.75
COL6A1-207ENST00000612273 SLURP1P55000 103 aa10.39□□□□□ -0.75
COL6A1-207ENST00000612273 Q5PR19 223 aa10.39□□□□□ -0.75
COL6A1-207ENST00000612273 B4DSR2 109 aa10.38□□□□□ -0.75
COL6A1-207ENST00000612273 HOXD3P31249 432 aaPredicted RBP10.38□□□□□ -0.75
COL6A1-207ENST00000612273 UBE2D1P51668 147 aa10.38□□□□□ -0.75
COL6A1-207ENST00000612273 FOXI1Q12951 378 aa10.38□□□□□ -0.75
COL6A1-207ENST00000612273 CD28P10747 220 aa10.38□□□□□ -0.75
COL6A1-207ENST00000612273 PSMB8P28062 276 aa10.38□□□□□ -0.75
COL6A1-207ENST00000612273 CFAP126Q5VTH2 177 aa10.38□□□□□ -0.75
COL6A1-207ENST00000612273 IGHV3-30P01768 117 aa10.38□□□□□ -0.75
COL6A1-207ENST00000612273 RBMY1A1P0DJD3 496 aaKnown RBP10.38□□□□□ -0.75
COL6A1-207ENST00000612273 RBMY1CP0DJD4 496 aa10.38□□□□□ -0.75
COL6A1-207ENST00000612273 IGHV3-30-5P0DP03 117 aa10.38□□□□□ -0.75
COL6A1-207ENST00000612273 RBMY1FQ15415 496 aaKnown RBP10.38□□□□□ -0.75
COL6A1-207ENST00000612273 Q6ZSV7 163 aa10.38□□□□□ -0.75
COL6A1-207ENST00000612273 MUSTN1Q8IVN3 82 aa10.38□□□□□ -0.75
COL6A1-207ENST00000612273 C9JAW5 83 aa10.37□□□□□ -0.75
COL6A1-207ENST00000612273 TCTEX1D4Q5JR98 221 aa10.37□□□□□ -0.75
COL6A1-207ENST00000612273 TRBV27A0A0K0K1C4 114 aa10.37□□□□□ -0.75
COL6A1-207ENST00000612273 MED14OSP0DP75 135 aa10.37□□□□□ -0.75
COL6A1-207ENST00000612273 APRG1Q8IVJ8 170 aa10.37□□□□□ -0.75
COL6A1-207ENST00000612273 DAND5Q8N907 189 aa10.37□□□□□ -0.75
COL6A1-207ENST00000612273 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.36□□□□□ -0.75
COL6A1-207ENST00000612273 IGKV2-29A2NJV5 120 aaPredicted RBP10.36□□□□□ -0.75
COL6A1-207ENST00000612273 PRB1P04280 392 aa10.36□□□□□ -0.75
COL6A1-207ENST00000612273 SLC25A29Q8N8R3 303 aa10.36□□□□□ -0.75
COL6A1-207ENST00000612273 TMEM141Q96I45 108 aa10.36□□□□□ -0.75
COL6A1-207ENST00000612273 PRO1854Q9UHT4 67 aa10.36□□□□□ -0.75
COL6A1-207ENST00000612273 MT-ATP8P03928 68 aa10.36□□□□□ -0.75
COL6A1-207ENST00000612273 FHL3Q13643 280 aa10.36□□□□□ -0.75
COL6A1-207ENST00000612273 PAPPA-AS1Q5QFB9 102 aa10.36□□□□□ -0.75
COL6A1-207ENST00000612273 H3BUA1 57 aa10.35□□□□□ -0.75
COL6A1-207ENST00000612273 K7EQG2 157 aa10.35□□□□□ -0.75
COL6A1-207ENST00000612273 ZNF22P17026 224 aaPredicted RBP10.35□□□□□ -0.75
COL6A1-207ENST00000612273 C10orf126Q8N4M7 172 aa10.35□□□□□ -0.75
COL6A1-207ENST00000612273 C20orf203Q8NBC4 194 aa10.35□□□□□ -0.75
COL6A1-207ENST00000612273 ZNF625Q96I27 306 aaPredicted RBP10.35□□□□□ -0.75
COL6A1-207ENST00000612273 ATP6V0BQ99437 205 aa10.35□□□□□ -0.75
COL6A1-207ENST00000612273 TIMM17AQ99595 171 aa10.35□□□□□ -0.75
COL6A1-207ENST00000612273 C1QTNF4Q9BXJ3 329 aa10.35□□□□□ -0.75
COL6A1-207ENST00000612273 LGALS9O00182 355 aa10.35□□□□□ -0.75
COL6A1-207ENST00000612273 NXPH4O95158 308 aa10.35□□□□□ -0.75
COL6A1-207ENST00000612273 ELANEP08246 267 aa10.34□□□□□ -0.75
COL6A1-207ENST00000612273 C9orf85Q96MD7 179 aa10.34□□□□□ -0.75
COL6A1-207ENST00000612273 IGLV4-3A0A075B6K6 122 aa10.34□□□□□ -0.75
COL6A1-207ENST00000612273 I3L3M4 83 aa10.34□□□□□ -0.75
COL6A1-207ENST00000612273 SPINK8P0C7L1 97 aa10.34□□□□□ -0.75
COL6A1-207ENST00000612273 TNFRSF18Q9Y5U5 241 aa10.34□□□□□ -0.75
COL6A1-207ENST00000612273 Q6ZSN1 163 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms