RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 PRR9Q5T870 116 aa9.9□□□□□ -0.82
TCF3-220ENST00000611869 TMEM243Q9BU79 118 aa9.9□□□□□ -0.82
TCF3-220ENST00000611869 SPINK8P0C7L1 97 aa9.9□□□□□ -0.82
TCF3-220ENST00000611869 A0A1W2PPM0 123 aa9.9□□□□□ -0.83
TCF3-220ENST00000611869 SPATA12Q7Z6I5 190 aa9.9□□□□□ -0.83
TCF3-220ENST00000611869 CENPEQ02224 2701 aa9.9□□□□□ -0.83
TCF3-220ENST00000611869 GAS8-AS1O95177 125 aa9.89□□□□□ -0.83
TCF3-220ENST00000611869 C4orf3Q8WVX3 66 aa9.89□□□□□ -0.83
TCF3-220ENST00000611869 BAALCQ8WXS3 180 aa9.89□□□□□ -0.83
TCF3-220ENST00000611869 PSMB8P28062 276 aa9.89□□□□□ -0.83
TCF3-220ENST00000611869 KRTAP10-9P60411 292 aa9.89□□□□□ -0.83
TCF3-220ENST00000611869 RNF185Q96GF1 192 aa9.89□□□□□ -0.83
TCF3-220ENST00000611869 PAX4O43316 350 aa9.89□□□□□ -0.83
TCF3-220ENST00000611869 BOD1L2Q8IYS8 172 aa9.89□□□□□ -0.83
TCF3-220ENST00000611869 CCL25O15444 150 aa9.89□□□□□ -0.83
TCF3-220ENST00000611869 FXYD2P54710 66 aa9.89□□□□□ -0.83
TCF3-220ENST00000611869 CKS1BP61024 79 aa9.89□□□□□ -0.83
TCF3-220ENST00000611869 C12orf74Q32Q52 190 aa9.89□□□□□ -0.83
TCF3-220ENST00000611869 F5H768 121 aa9.88□□□□□ -0.83
TCF3-220ENST00000611869 ETDBQ3ZM63 59 aa9.88□□□□□ -0.83
TCF3-220ENST00000611869 EYSQ5T1H1 3165 aa9.88□□□□□ -0.83
TCF3-220ENST00000611869 OCIAD2Q56VL3 154 aa9.88□□□□□ -0.83
TCF3-220ENST00000611869 TOMM6Q96B49 74 aa9.88□□□□□ -0.83
TCF3-220ENST00000611869 OPRPNQ99935 248 aaPredicted RBP9.88□□□□□ -0.83
TCF3-220ENST00000611869 K7EP34 96 aa9.87□□□□□ -0.83
TCF3-220ENST00000611869 MAP6D1Q9H9H5 199 aa9.87□□□□□ -0.83
TCF3-220ENST00000611869 H3BMG7 143 aa9.87□□□□□ -0.83
TCF3-220ENST00000611869 CRPP02741 224 aa9.87□□□□□ -0.83
TCF3-220ENST00000611869 DAD1P61803 113 aa9.87□□□□□ -0.83
TCF3-220ENST00000611869 C3orf56Q8N813 242 aa9.87□□□□□ -0.83
TCF3-220ENST00000611869 SPEGQ15772 3267 aa9.87□□□□□ -0.83
TCF3-220ENST00000611869 C11orf86A6NJI1 115 aa9.87□□□□□ -0.83
TCF3-220ENST00000611869 EDN2P20800 178 aa9.87□□□□□ -0.83
TCF3-220ENST00000611869 TAL2Q16559 108 aa9.87□□□□□ -0.83
TCF3-220ENST00000611869 LRRC75A-AS1Q8N1F1 130 aa9.87□□□□□ -0.83
TCF3-220ENST00000611869 C9JAW5 83 aa9.86□□□□□ -0.83
TCF3-220ENST00000611869 K7EP13 123 aa9.86□□□□□ -0.83
TCF3-220ENST00000611869 P0DMU3 169 aa9.86□□□□□ -0.83
TCF3-220ENST00000611869 FAM231AP0DMU4 169 aa9.86□□□□□ -0.83
TCF3-220ENST00000611869 FAM231CP0DMU5 169 aa9.86□□□□□ -0.83
TCF3-220ENST00000611869 RBMY1BA6NDE4 496 aaKnown RBP9.86□□□□□ -0.83
TCF3-220ENST00000611869 RBMY1EA6NEQ0 496 aaKnown RBP9.86□□□□□ -0.83
TCF3-220ENST00000611869 IGLV1-40P01703 118 aa9.86□□□□□ -0.83
TCF3-220ENST00000611869 RBMY1DP0C7P1 496 aaKnown RBP9.86□□□□□ -0.83
TCF3-220ENST00000611869 RBMY1A1P0DJD3 496 aaKnown RBP9.86□□□□□ -0.83
TCF3-220ENST00000611869 RBMY1CP0DJD4 496 aa9.86□□□□□ -0.83
TCF3-220ENST00000611869 TMEM86BQ8N661 226 aa9.86□□□□□ -0.83
TCF3-220ENST00000611869 C18orf65Q6ZTR6 163 aa9.86□□□□□ -0.83
TCF3-220ENST00000611869 Q6ZSV7 163 aa9.85□□□□□ -0.83
TCF3-220ENST00000611869 TAX1BP3O14907 124 aa9.85□□□□□ -0.83
TCF3-220ENST00000611869 RNF152Q8N8N0 203 aa9.85□□□□□ -0.83
TCF3-220ENST00000611869 TRAV12-1A0A0B4J245 112 aa9.85□□□□□ -0.83
TCF3-220ENST00000611869 H3BMM0 161 aa9.85□□□□□ -0.83
TCF3-220ENST00000611869 PFN2P35080 140 aa9.85□□□□□ -0.83
TCF3-220ENST00000611869 URB1-AS1Q96HZ7 61 aa9.85□□□□□ -0.83
TCF3-220ENST00000611869 LGALS9O00182 355 aa9.85□□□□□ -0.83
TCF3-220ENST00000611869 PIFOQ8TCI5 191 aa9.85□□□□□ -0.83
TCF3-220ENST00000611869 ZNF702PQ9H963 129 aa9.85□□□□□ -0.83
TCF3-220ENST00000611869 SS18Q15532 418 aa9.84□□□□□ -0.83
TCF3-220ENST00000611869 CLPSL2Q6UWE3 100 aa9.84□□□□□ -0.83
TCF3-220ENST00000611869 PRO1854Q9UHT4 67 aa9.84□□□□□ -0.83
TCF3-220ENST00000611869 U3KQK5 164 aa9.84□□□□□ -0.83
TCF3-220ENST00000611869 CEMP1Q6PRD7 247 aaPredicted RBP9.84□□□□□ -0.83
TCF3-220ENST00000611869 A0A0J9YY99 117 aa9.83□□□□□ -0.84
TCF3-220ENST00000611869 COL6A3P12111 3177 aa9.83□□□□□ -0.84
TCF3-220ENST00000611869 TRAV8-3A0A0A6YYJ7 113 aa9.83□□□□□ -0.84
TCF3-220ENST00000611869 FGF6P10767 208 aa9.83□□□□□ -0.84
TCF3-220ENST00000611869 DEFB114Q30KQ6 69 aa9.83□□□□□ -0.84
TCF3-220ENST00000611869 TTC32Q5I0X7 151 aa9.83□□□□□ -0.84
TCF3-220ENST00000611869 TIMM17AQ99595 171 aa9.83□□□□□ -0.84
TCF3-220ENST00000611869 RNASE3P12724 160 aaKnown RBP9.83□□□□□ -0.84
TCF3-220ENST00000611869 C2orf82Q6UX34 121 aa9.83□□□□□ -0.84
TCF3-220ENST00000611869 C20orf203Q8NBC4 194 aa9.83□□□□□ -0.84
TCF3-220ENST00000611869 GTSF1LQ9H1H1 148 aa9.83□□□□□ -0.84
TCF3-220ENST00000611869 SPANXA1Q9NS26 97 aa9.83□□□□□ -0.84
TCF3-220ENST00000611869 LEPROTO15243 131 aa9.82□□□□□ -0.84
TCF3-220ENST00000611869 ATXN8Q156A1 80 aa9.82□□□□□ -0.84
TCF3-220ENST00000611869 DEFB121Q5J5C9 76 aa9.82□□□□□ -0.84
TCF3-220ENST00000611869 SIGMAR1Q99720 223 aa9.82□□□□□ -0.84
TCF3-220ENST00000611869 TRAV25A0A0B4J276 109 aa9.82□□□□□ -0.84
TCF3-220ENST00000611869 HERVK_113P63121 156 aa9.82□□□□□ -0.84
TCF3-220ENST00000611869 REV3LO60673 3130 aa9.82□□□□□ -0.84
TCF3-220ENST00000611869 E9PLD3 99 aa9.81□□□□□ -0.84
TCF3-220ENST00000611869 IGKV2D-26A0A0A0MRZ7 120 aa9.81□□□□□ -0.84
TCF3-220ENST00000611869 PRM2P04554 102 aa9.81□□□□□ -0.84
TCF3-220ENST00000611869 PSMG3-AS1Q96PY0 264 aa9.81□□□□□ -0.84
TCF3-220ENST00000611869 ESM1Q9NQ30 184 aa9.81□□□□□ -0.84
TCF3-220ENST00000611869 A0A1B0GV72 72 aa9.81□□□□□ -0.84
TCF3-220ENST00000611869 APOC4P55056 127 aa9.81□□□□□ -0.84
TCF3-220ENST00000611869 DCANP1Q8TF63 244 aa9.81□□□□□ -0.84
TCF3-220ENST00000611869 K7EQD1 137 aa9.81□□□□□ -0.84
TCF3-220ENST00000611869 ODF3Q96PU9 254 aa9.81□□□□□ -0.84
TCF3-220ENST00000611869 Q9H8V8 135 aa9.8□□□□□ -0.84
TCF3-220ENST00000611869 HIGD1BQ9P298 99 aa9.8□□□□□ -0.84
TCF3-220ENST00000611869 DSPP15924 2871 aaKnown RBP9.8□□□□□ -0.84
TCF3-220ENST00000611869 IGLL5B9A064 214 aa9.8□□□□□ -0.84
TCF3-220ENST00000611869 NRACQ8N912 160 aa9.8□□□□□ -0.84
TCF3-220ENST00000611869 Q8N976 141 aa9.8□□□□□ -0.84
TCF3-220ENST00000611869 DNAJC30Q96LL9 226 aa9.8□□□□□ -0.84
TCF3-220ENST00000611869 TRBV7-3A0A075B6L6 115 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms