RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 NDUFA12Q9UI09 145 aa6.53□□□□□ -1.36
LIG4-204ENST00000611712 GAGE12HA6NDE8 117 aa6.52□□□□□ -1.37
LIG4-204ENST00000611712 TMEM262E9PQX1 116 aa6.52□□□□□ -1.37
LIG4-204ENST00000611712 RPL35AP18077 110 aaKnown RBP6.52□□□□□ -1.37
LIG4-204ENST00000611712 ZNRF2Q8NHG8 242 aa6.52□□□□□ -1.37
LIG4-204ENST00000611712 SNCGO76070 127 aa6.52□□□□□ -1.37
LIG4-204ENST00000611712 PF4P02776 101 aa6.52□□□□□ -1.37
LIG4-204ENST00000611712 ABCA2Q9BZC7 2435 aa6.51□□□□□ -1.37
LIG4-204ENST00000611712 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.51□□□□□ -1.37
LIG4-204ENST00000611712 IGKV2-29A2NJV5 120 aaPredicted RBP6.51□□□□□ -1.37
LIG4-204ENST00000611712 K7EQG2 157 aa6.51□□□□□ -1.37
LIG4-204ENST00000611712 PIFOQ8TCI5 191 aa6.51□□□□□ -1.37
LIG4-204ENST00000611712 G3V4G9 280 aa6.51□□□□□ -1.37
LIG4-204ENST00000611712 NSUN5P1Q3KNT7 163 aa6.51□□□□□ -1.37
LIG4-204ENST00000611712 AVPP01185 164 aa6.5□□□□□ -1.37
LIG4-204ENST00000611712 AZU1P20160 251 aa6.5□□□□□ -1.37
LIG4-204ENST00000611712 ATXN8Q156A1 80 aa6.5□□□□□ -1.37
LIG4-204ENST00000611712 PSMG3-AS1Q96PY0 264 aa6.5□□□□□ -1.37
LIG4-204ENST00000611712 PKD1L2Q7Z442 2459 aa6.5□□□□□ -1.37
LIG4-204ENST00000611712 TMEM89A2RUT3 159 aa6.5□□□□□ -1.37
LIG4-204ENST00000611712 GAGE12JA6NER3 117 aa6.5□□□□□ -1.37
LIG4-204ENST00000611712 LEPROTO15243 131 aa6.5□□□□□ -1.37
LIG4-204ENST00000611712 SPINK8P0C7L1 97 aa6.5□□□□□ -1.37
LIG4-204ENST00000611712 EDN2P20800 178 aa6.5□□□□□ -1.37
LIG4-204ENST00000611712 GAGE4Q13068 117 aa6.5□□□□□ -1.37
LIG4-204ENST00000611712 GAGE5Q13069 117 aa6.5□□□□□ -1.37
LIG4-204ENST00000611712 TTC32Q5I0X7 151 aa6.5□□□□□ -1.37
LIG4-204ENST00000611712 MORN3Q6PF18 240 aaPredicted RBP6.5□□□□□ -1.37
LIG4-204ENST00000611712 C20orf203Q8NBC4 194 aa6.5□□□□□ -1.37
LIG4-204ENST00000611712 CHCHD5Q9BSY4 110 aa6.5□□□□□ -1.37
LIG4-204ENST00000611712 AKAP13Q12802 2813 aa6.5□□□□□ -1.37
LIG4-204ENST00000611712 A4D1N5 150 aa6.5□□□□□ -1.37
LIG4-204ENST00000611712 TMEM61Q8N0U2 210 aa6.5□□□□□ -1.37
LIG4-204ENST00000611712 OR13C6PQ8NH95 151 aa6.5□□□□□ -1.37
LIG4-204ENST00000611712 IGLV1-40P01703 118 aa6.5□□□□□ -1.37
LIG4-204ENST00000611712 CFHR3Q02985 330 aa6.5□□□□□ -1.37
LIG4-204ENST00000611712 PRIMA1Q86XR5 153 aa6.5□□□□□ -1.37
LIG4-204ENST00000611712 PPDPFLQ8WWR9 84 aa6.5□□□□□ -1.37
LIG4-204ENST00000611712 ABCA12Q86UK0 2595 aa6.49□□□□□ -1.37
LIG4-204ENST00000611712 KLLNB2CW77 178 aa6.49□□□□□ -1.37
LIG4-204ENST00000611712 C2orf82Q6UX34 121 aa6.49□□□□□ -1.37
LIG4-204ENST00000611712 IGLV2-18A0A075B6J9 118 aa6.49□□□□□ -1.37
LIG4-204ENST00000611712 CFC1BP0CG36 223 aa6.49□□□□□ -1.37
LIG4-204ENST00000611712 CFC1P0CG37 223 aa6.49□□□□□ -1.37
LIG4-204ENST00000611712 PSMB8P28062 276 aa6.49□□□□□ -1.37
LIG4-204ENST00000611712 ZMAT4Q9H898 229 aa6.49□□□□□ -1.37
LIG4-204ENST00000611712 P0DMU3 169 aa6.49□□□□□ -1.37
LIG4-204ENST00000611712 FAM231AP0DMU4 169 aa6.49□□□□□ -1.37
LIG4-204ENST00000611712 FAM231CP0DMU5 169 aa6.49□□□□□ -1.37
LIG4-204ENST00000611712 MUSTN1Q8IVN3 82 aa6.48□□□□□ -1.37
LIG4-204ENST00000611712 C10orf126Q8N4M7 172 aa6.48□□□□□ -1.37
LIG4-204ENST00000611712 DCANP1Q8TF63 244 aa6.48□□□□□ -1.37
LIG4-204ENST00000611712 DNAL4O96015 105 aa6.48□□□□□ -1.37
LIG4-204ENST00000611712 CRIP2P52943 208 aaPredicted RBP6.48□□□□□ -1.37
LIG4-204ENST00000611712 CEMP1Q6PRD7 247 aaPredicted RBP6.48□□□□□ -1.37
LIG4-204ENST00000611712 SLC25A20O43772 301 aa6.48□□□□□ -1.37
LIG4-204ENST00000611712 ODF3Q96PU9 254 aa6.48□□□□□ -1.37
LIG4-204ENST00000611712 M0QY20 66 aa6.47□□□□□ -1.37
LIG4-204ENST00000611712 CMC4P56277 68 aaPredicted RBP6.47□□□□□ -1.37
LIG4-204ENST00000611712 DEFB113Q30KQ7 82 aa6.47□□□□□ -1.37
LIG4-204ENST00000611712 TRAV8-4A0A0B4J246 113 aa6.47□□□□□ -1.37
LIG4-204ENST00000611712 LGALS9O00182 355 aa6.47□□□□□ -1.37
LIG4-204ENST00000611712 GAGE7O76087 117 aa6.47□□□□□ -1.37
LIG4-204ENST00000611712 GAGE12FP0CL80 117 aa6.47□□□□□ -1.37
LIG4-204ENST00000611712 GAGE12GP0CL81 117 aa6.47□□□□□ -1.37
LIG4-204ENST00000611712 GAGE12IP0CL82 117 aa6.47□□□□□ -1.37
LIG4-204ENST00000611712 POLR2KP53803 58 aaKnown RBP6.47□□□□□ -1.37
LIG4-204ENST00000611712 HIVEP2P31629 2446 aa6.47□□□□□ -1.37
LIG4-204ENST00000611712 DOPEY1Q5JWR5 2465 aa6.47□□□□□ -1.37
LIG4-204ENST00000611712 TRAV8-3A0A0A6YYJ7 113 aa6.47□□□□□ -1.37
LIG4-204ENST00000611712 TNRC18O15417 2968 aaPredicted RBP6.47□□□□□ -1.37
LIG4-204ENST00000611712 SPAG8Q99932 426 aaPredicted RBP6.47□□□□□ -1.37
LIG4-204ENST00000611712 SPANXA1Q9NS26 97 aa6.47□□□□□ -1.37
LIG4-204ENST00000611712 AGRNO00468 2067 aa6.47□□□□□ -1.37
LIG4-204ENST00000611712 PRRC2AP48634 2157 aaKnown RBP6.47□□□□□ -1.37
LIG4-204ENST00000611712 TRBV27A0A0K0K1C4 114 aa6.47□□□□□ -1.37
LIG4-204ENST00000611712 SOCS3O14543 225 aa6.47□□□□□ -1.37
LIG4-204ENST00000611712 LINC00158P58513 81 aa6.47□□□□□ -1.37
LIG4-204ENST00000611712 UFSP1Q6NVU6 142 aa6.47□□□□□ -1.37
LIG4-204ENST00000611712 ZNF462Q96JM2 2506 aa6.46□□□□□ -1.37
LIG4-204ENST00000611712 A0A0J9YY99 117 aa6.46□□□□□ -1.37
LIG4-204ENST00000611712 CKS1BP61024 79 aa6.46□□□□□ -1.37
LIG4-204ENST00000611712 NDUFA11Q86Y39 141 aa6.46□□□□□ -1.37
LIG4-204ENST00000611712 TSPAN13O95857 204 aa6.46□□□□□ -1.38
LIG4-204ENST00000611712 C1QTNF4Q9BXJ3 329 aa6.46□□□□□ -1.38
LIG4-204ENST00000611712 PRSS47A8MTI9 375 aa6.46□□□□□ -1.38
LIG4-204ENST00000611712 CCL24O00175 119 aa6.46□□□□□ -1.38
LIG4-204ENST00000611712 DEFB130BP0DP73 79 aa6.46□□□□□ -1.38
LIG4-204ENST00000611712 DEFB130AP0DP74 79 aa6.46□□□□□ -1.38
LIG4-204ENST00000611712 PTH2Q96A98 100 aa6.46□□□□□ -1.38
LIG4-204ENST00000611712 H3BMM0 161 aa6.45□□□□□ -1.38
LIG4-204ENST00000611712 CRYGDP07320 174 aa6.45□□□□□ -1.38
LIG4-204ENST00000611712 PROK1P58294 105 aa6.45□□□□□ -1.38
LIG4-204ENST00000611712 GAGE2BQ13066 116 aa6.45□□□□□ -1.38
LIG4-204ENST00000611712 GAGE2EQ4V326 116 aa6.45□□□□□ -1.38
LIG4-204ENST00000611712 Q6YL49 198 aa6.45□□□□□ -1.38
LIG4-204ENST00000611712 NOP10Q9NPE3 64 aaKnown RBP6.45□□□□□ -1.38
LIG4-204ENST00000611712 GAGE2DQ9UEU5 116 aa6.45□□□□□ -1.38
LIG4-204ENST00000611712 ADGRG4Q8IZF6 3080 aa6.45□□□□□ -1.38
LIG4-204ENST00000611712 TRBV7-3A0A075B6L6 115 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms