RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-205ENST00000611150 IGLV3-12A0A075B6K2 115 aa12.81□□□□□ -0.36
CDK11B-205ENST00000611150 NAV3Q8IVL0 2385 aa12.81□□□□□ -0.36
CDK11B-205ENST00000611150 KLKP1Q107X0 134 aa12.8□□□□□ -0.36
CDK11B-205ENST00000611150 MRPL55Q7Z7F7 128 aaKnown RBP12.8□□□□□ -0.36
CDK11B-205ENST00000611150 LINC00846Q9NV44 126 aa12.8□□□□□ -0.36
CDK11B-205ENST00000611150 IGKV3D-15A0A087WSY6 115 aa12.8□□□□□ -0.36
CDK11B-205ENST00000611150 SPTY2D1-AS1A0A0U1RR47 76 aa12.8□□□□□ -0.36
CDK11B-205ENST00000611150 RPL39LQ96EH5 51 aaKnown RBP12.8□□□□□ -0.36
CDK11B-205ENST00000611150 U3KQE9 123 aa12.8□□□□□ -0.36
CDK11B-205ENST00000611150 MAP1BP46821 2468 aaKnown RBP12.79□□□□□ -0.36
CDK11B-205ENST00000611150 AKAP13Q12802 2813 aa12.79□□□□□ -0.36
CDK11B-205ENST00000611150 IGHV3-64A0A075B6Q5 118 aa12.79□□□□□ -0.36
CDK11B-205ENST00000611150 IGKV3D-20A0A0C4DH25 116 aa12.79□□□□□ -0.36
CDK11B-205ENST00000611150 PLAC8L1A1L4L8 177 aa12.79□□□□□ -0.36
CDK11B-205ENST00000611150 C22orf24Q9Y442 160 aa12.79□□□□□ -0.36
CDK11B-205ENST00000611150 PAX4O43316 350 aa12.79□□□□□ -0.36
CDK11B-205ENST00000611150 SAA4P35542 130 aa12.79□□□□□ -0.36
CDK11B-205ENST00000611150 BEAN1Q3B7T3 259 aa12.79□□□□□ -0.36
CDK11B-205ENST00000611150 MOB4Q9Y3A3 225 aa12.79□□□□□ -0.36
CDK11B-205ENST00000611150 EPG5Q9HCE0 2579 aa12.79□□□□□ -0.36
CDK11B-205ENST00000611150 TRAV23DV6A0A075B6W5 121 aa12.78□□□□□ -0.36
CDK11B-205ENST00000611150 IGHV7-4-1A0A0J9YVY3 117 aa12.78□□□□□ -0.36
CDK11B-205ENST00000611150 M0R381 172 aa12.78□□□□□ -0.36
CDK11B-205ENST00000611150 NTN3O00634 580 aaPredicted RBP12.78□□□□□ -0.36
CDK11B-205ENST00000611150 IGKV1D-17A0A075B6S4 117 aa12.78□□□□□ -0.36
CDK11B-205ENST00000611150 LMO7DNF2Z398 122 aa12.78□□□□□ -0.36
CDK11B-205ENST00000611150 ASPMQ8IZT6 3477 aa12.77□□□□□ -0.36
CDK11B-205ENST00000611150 NXPH4O95158 308 aa12.77□□□□□ -0.36
CDK11B-205ENST00000611150 RNF7Q9UBF6 113 aa12.77□□□□□ -0.36
CDK11B-205ENST00000611150 RPL28P46779 137 aaKnown RBP12.77□□□□□ -0.37
CDK11B-205ENST00000611150 ZNRF1Q8ND25 227 aa12.77□□□□□ -0.37
CDK11B-205ENST00000611150 RNF223E7ERA6 249 aa12.76□□□□□ -0.37
CDK11B-205ENST00000611150 ATP5EP2Q5VTU8 51 aa12.76□□□□□ -0.37
CDK11B-205ENST00000611150 ZNF833PQ6ZTB9 187 aa12.76□□□□□ -0.37
CDK11B-205ENST00000611150 MPLKIPQ8TAP9 179 aa12.76□□□□□ -0.37
CDK11B-205ENST00000611150 IGKV1-17P01599 117 aa12.75□□□□□ -0.37
CDK11B-205ENST00000611150 MSMPQ1L6U9 139 aa12.75□□□□□ -0.37
CDK11B-205ENST00000611150 PRRC2AP48634 2157 aaKnown RBP12.75□□□□□ -0.37
CDK11B-205ENST00000611150 TRAV7A0A075B6U4 112 aa12.74□□□□□ -0.37
CDK11B-205ENST00000611150 NDUFC1O43677 76 aa12.74□□□□□ -0.37
CDK11B-205ENST00000611150 BCE1O60756 84 aa12.74□□□□□ -0.37
CDK11B-205ENST00000611150 TRBV12-3P01733 135 aa12.74□□□□□ -0.37
CDK11B-205ENST00000611150 HILS1P60008 231 aa12.74□□□□□ -0.37
CDK11B-205ENST00000611150 S100A7L2Q5SY68 101 aa12.74□□□□□ -0.37
CDK11B-205ENST00000611150 WDFY3Q8IZQ1 3526 aa12.74□□□□□ -0.37
CDK11B-205ENST00000611150 USP24Q9UPU5 2620 aa12.74□□□□□ -0.37
CDK11B-205ENST00000611150 KMT2BQ9UMN6 2715 aaPredicted RBP12.74□□□□□ -0.37
CDK11B-205ENST00000611150 F8WEM9 126 aa12.74□□□□□ -0.37
CDK11B-205ENST00000611150 DOCK10Q96BY6 2186 aa12.74□□□□□ -0.37
CDK11B-205ENST00000611150 RAI1Q7Z5J4 1906 aaPredicted RBP12.74□□□□□ -0.37
CDK11B-205ENST00000611150 LHBP01229 141 aa12.73□□□□□ -0.37
CDK11B-205ENST00000611150 TMEM30BQ3MIR4 351 aa12.73□□□□□ -0.37
CDK11B-205ENST00000611150 IGF2RP11717 2491 aa12.73□□□□□ -0.37
CDK11B-205ENST00000611150 CACNA1BQ00975 2339 aa12.73□□□□□ -0.37
CDK11B-205ENST00000611150 ADARB2-AS1A8MUL3 147 aa12.72□□□□□ -0.37
CDK11B-205ENST00000611150 IGHV3-30-3P0DP02 117 aa12.72□□□□□ -0.37
CDK11B-205ENST00000611150 RPL39P62891 51 aaKnown RBP12.72□□□□□ -0.37
CDK11B-205ENST00000611150 IGLV2-23P01705 113 aa12.71□□□□□ -0.37
CDK11B-205ENST00000611150 RPL27AP46776 148 aaKnown RBP12.71□□□□□ -0.37
CDK11B-205ENST00000611150 C14orf132Q9NPU4 83 aa12.71□□□□□ -0.37
CDK11B-205ENST00000611150 C11orf21Q9P2W6 132 aa12.71□□□□□ -0.37
CDK11B-205ENST00000611150 FREM2Q5SZK8 3169 aa12.71□□□□□ -0.37
CDK11B-205ENST00000611150 PLXNB1O43157 2135 aa12.71□□□□□ -0.37
CDK11B-205ENST00000611150 TRBV27A0A0K0K1C4 114 aa12.71□□□□□ -0.38
CDK11B-205ENST00000611150 ADORA2A-AS1P86434 159 aa12.71□□□□□ -0.38
CDK11B-205ENST00000611150 ZNRD1Q9P1U0 126 aa12.71□□□□□ -0.38
CDK11B-205ENST00000611150 APELAP0DMC3 54 aa12.7□□□□□ -0.38
CDK11B-205ENST00000611150 DEFB133Q30KQ1 61 aa12.7□□□□□ -0.38
CDK11B-205ENST00000611150 DMXL2Q8TDJ6 3036 aa12.7□□□□□ -0.38
CDK11B-205ENST00000611150 IGHV1-69P01742 117 aa12.7□□□□□ -0.38
CDK11B-205ENST00000611150 MGPP08493 103 aa12.7□□□□□ -0.38
CDK11B-205ENST00000611150 Q8N2B8 174 aa12.7□□□□□ -0.38
CDK11B-205ENST00000611150 TRAV13-2A0A0B4J235 113 aa12.69□□□□□ -0.38
CDK11B-205ENST00000611150 LY6G6EA0A0G2JKS1 128 aa12.69□□□□□ -0.38
CDK11B-205ENST00000611150 SRRM5B3KS81 715 aa12.69□□□□□ -0.38
CDK11B-205ENST00000611150 BPESC1Q9GZL8 116 aa12.69□□□□□ -0.38
CDK11B-205ENST00000611150 NDUFA12Q9UI09 145 aa12.69□□□□□ -0.38
CDK11B-205ENST00000611150 U3KQA8 63 aa12.69□□□□□ -0.38
CDK11B-205ENST00000611150 ZZEF1O43149 2961 aa12.68□□□□□ -0.38
CDK11B-205ENST00000611150 I3L2K1 104 aa12.68□□□□□ -0.38
CDK11B-205ENST00000611150 BLCAPP62952 87 aa12.67□□□□□ -0.38
CDK11B-205ENST00000611150 ZNF580Q9UK33 172 aa12.67□□□□□ -0.38
CDK11B-205ENST00000611150 POLEQ07864 2286 aa12.67□□□□□ -0.38
CDK11B-205ENST00000611150 MAGEA5P43359 124 aa12.67□□□□□ -0.38
CDK11B-205ENST00000611150 PRR14LQ5THK1 2151 aa12.67□□□□□ -0.38
CDK11B-205ENST00000611150 ASXL3Q9C0F0 2248 aa12.66□□□□□ -0.38
CDK11B-205ENST00000611150 TRBV10-3A0A0K0K1G6 114 aa12.66□□□□□ -0.38
CDK11B-205ENST00000611150 VCYO14598 125 aa12.66□□□□□ -0.38
CDK11B-205ENST00000611150 GPHB5Q86YW7 130 aa12.66□□□□□ -0.38
CDK11B-205ENST00000611150 RMI2Q96E14 147 aa12.66□□□□□ -0.38
CDK11B-205ENST00000611150 LINC00574Q9H8X3 128 aa12.66□□□□□ -0.38
CDK11B-205ENST00000611150 SNURFQ9Y675 71 aa12.66□□□□□ -0.38
CDK11B-205ENST00000611150 SOSTDC1Q6X4U4 206 aa12.65□□□□□ -0.38
CDK11B-205ENST00000611150 ANKRD11Q6UB99 2663 aaPredicted RBP12.65□□□□□ -0.38
CDK11B-205ENST00000611150 NDPQ00604 133 aa12.65□□□□□ -0.38
CDK11B-205ENST00000611150 IBA57-AS1B1ANH7 110 aa12.64□□□□□ -0.39
CDK11B-205ENST00000611150 SOCS3O14543 225 aa12.64□□□□□ -0.39
CDK11B-205ENST00000611150 RFPL3SP0C7P2 107 aa12.64□□□□□ -0.39
CDK11B-205ENST00000611150 IGFL4Q6B9Z1 124 aa12.64□□□□□ -0.39
CDK11B-205ENST00000611150 OBSCN-AS1Q96MR7 158 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms