RNA–Protein interactions for RNA: ENST00000610359.4

MUC1-221, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-221ENST00000610359 A0A1B0GUV1 79 aa4.01□□□□□ -1.77
MUC1-221ENST00000610359 GRIFINA4D1Z8 144 aa4.01□□□□□ -1.77
MUC1-221ENST00000610359 M0R381 172 aa4.01□□□□□ -1.77
MUC1-221ENST00000610359 CRYGAP11844 174 aa4.01□□□□□ -1.77
MUC1-221ENST00000610359 MALP21145 153 aa4.01□□□□□ -1.77
MUC1-221ENST00000610359 FAUP35544 74 aaKnown RBP4.01□□□□□ -1.77
MUC1-221ENST00000610359 RAB4BP61018 213 aa4.01□□□□□ -1.77
MUC1-221ENST00000610359 C9orf116Q5BN46 136 aaPredicted RBP4.01□□□□□ -1.77
MUC1-221ENST00000610359 DNLZQ5SXM8 178 aa4.01□□□□□ -1.77
MUC1-221ENST00000610359 OR5C1Q8NGR4 320 aa4.01□□□□□ -1.77
MUC1-221ENST00000610359 FLVCR2Q9UPI3 526 aa4.01□□□□□ -1.77
MUC1-221ENST00000610359 PHLDA3Q9Y5J5 127 aa4.01□□□□□ -1.77
MUC1-221ENST00000610359 USH2AO75445 5202 aa4□□□□□ -1.77
MUC1-221ENST00000610359 MT1HP80294 61 aa4□□□□□ -1.77
MUC1-221ENST00000610359 GAGE2BQ13066 116 aa4□□□□□ -1.77
MUC1-221ENST00000610359 ATP6V1FQ16864 119 aa4□□□□□ -1.77
MUC1-221ENST00000610359 KHDC3LQ587J8 217 aa4□□□□□ -1.77
MUC1-221ENST00000610359 TMEM97Q5BJF2 176 aa4□□□□□ -1.77
MUC1-221ENST00000610359 FAM74A1Q5RGS3 127 aa4□□□□□ -1.77
MUC1-221ENST00000610359 PRNTQ86SH4 94 aa4□□□□□ -1.77
MUC1-221ENST00000610359 RAB24Q969Q5 203 aa4□□□□□ -1.77
MUC1-221ENST00000610359 CARD19Q96LW7 228 aa4□□□□□ -1.77
MUC1-221ENST00000610359 AQP10Q96PS8 301 aa4□□□□□ -1.77
MUC1-221ENST00000610359 RPP21Q9H633 154 aaKnown RBP4□□□□□ -1.77
MUC1-221ENST00000610359 RSL24D1Q9UHA3 163 aaKnown RBP4□□□□□ -1.77
MUC1-221ENST00000610359 CARHSP1Q9Y2V2 147 aaKnown RBP4□□□□□ -1.77
MUC1-221ENST00000610359 IGHV1-24A0A0C4DH33 117 aa3.99□□□□□ -1.77
MUC1-221ENST00000610359 B4DEV8 164 aa3.99□□□□□ -1.77
MUC1-221ENST00000610359 KRBOX1C9JBD0 128 aa3.99□□□□□ -1.77
MUC1-221ENST00000610359 TCRAP04437 139 aa3.99□□□□□ -1.77
MUC1-221ENST00000610359 SULT1A2P50226 295 aa3.99□□□□□ -1.77
MUC1-221ENST00000610359 CRIP1P50238 77 aa3.99□□□□□ -1.77
MUC1-221ENST00000610359 HBG1P69891 147 aa3.99□□□□□ -1.77
MUC1-221ENST00000610359 HBG2P69892 147 aa3.99□□□□□ -1.77
MUC1-221ENST00000610359 FLI1Q01543 452 aaPredicted RBP3.99□□□□□ -1.77
MUC1-221ENST00000610359 NHLH2Q02577 135 aa3.99□□□□□ -1.77
MUC1-221ENST00000610359 ZNF56Q15929 161 aa3.99□□□□□ -1.77
MUC1-221ENST00000610359 KRTAP19-2Q3LHN2 52 aa3.99□□□□□ -1.77
MUC1-221ENST00000610359 ZFP69Q49AA0 526 aa3.99□□□□□ -1.77
MUC1-221ENST00000610359 TOMM5Q8N4H5 51 aa3.99□□□□□ -1.77
MUC1-221ENST00000610359 CHCHD10Q8WYQ3 142 aaPredicted RBP3.99□□□□□ -1.77
MUC1-221ENST00000610359 Q9H521 79 aa3.99□□□□□ -1.77
MUC1-221ENST00000610359 PKIGQ9Y2B9 76 aa3.99□□□□□ -1.77
MUC1-221ENST00000610359 FCGBPQ9Y6R7 5405 aaPredicted RBP3.98□□□□□ -1.77
MUC1-221ENST00000610359 IGLV7-46A0A075B6I9 117 aa3.98□□□□□ -1.77
MUC1-221ENST00000610359 A0A087WXM4 84 aa3.98□□□□□ -1.77
MUC1-221ENST00000610359 A0A087X002 238 aa3.98□□□□□ -1.77
MUC1-221ENST00000610359 IGKV3OR2-268A0A0C4DH90 116 aa3.98□□□□□ -1.77
MUC1-221ENST00000610359 SERTM2A0A1B0GWG4 89 aa3.98□□□□□ -1.77
MUC1-221ENST00000610359 FABP5P3A8MUU1 101 aa3.98□□□□□ -1.77
MUC1-221ENST00000610359 M0R036 132 aa3.98□□□□□ -1.77
MUC1-221ENST00000610359 KRTAP10-6P60371 365 aaPredicted RBP3.98□□□□□ -1.77
MUC1-221ENST00000610359 EIF5AP63241 154 aaKnown RBP3.98□□□□□ -1.77
MUC1-221ENST00000610359 FOXI1Q12951 378 aa3.98□□□□□ -1.77
MUC1-221ENST00000610359 STX12Q86Y82 276 aa3.98□□□□□ -1.77
MUC1-221ENST00000610359 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.98□□□□□ -1.77
MUC1-221ENST00000610359 SDHCQ99643 169 aaPredicted RBP3.98□□□□□ -1.77
MUC1-221ENST00000610359 MLST8Q9BVC4 326 aa3.98□□□□□ -1.77
MUC1-221ENST00000610359 WDR61Q9GZS3 305 aaKnown RBP3.98□□□□□ -1.77
MUC1-221ENST00000610359 TRAV6A0A075B6T7 132 aa3.97□□□□□ -1.77
MUC1-221ENST00000610359 A0A087WZ39 114 aa3.97□□□□□ -1.77
MUC1-221ENST00000610359 LOC107984640A0A0U1RRK4 108 aa3.97□□□□□ -1.77
MUC1-221ENST00000610359 NDUFB6O95139 128 aa3.97□□□□□ -1.77
MUC1-221ENST00000610359 TNFRSF6BO95407 300 aa3.97□□□□□ -1.77
MUC1-221ENST00000610359 BCL2P10415 239 aa3.97□□□□□ -1.77
MUC1-221ENST00000610359 TPT1P13693 172 aaKnown RBP3.97□□□□□ -1.77
MUC1-221ENST00000610359 TAS2R45P59539 299 aa3.97□□□□□ -1.77
MUC1-221ENST00000610359 SYCNQ0VAF6 134 aa3.97□□□□□ -1.77
MUC1-221ENST00000610359 SPCS2Q15005 226 aa3.97□□□□□ -1.77
MUC1-221ENST00000610359 ASB16-AS1Q495Z4 193 aa3.97□□□□□ -1.77
MUC1-221ENST00000610359 ZFP82Q8N141 532 aa3.97□□□□□ -1.77
MUC1-221ENST00000610359 VCX3AQ9NNX9 186 aa3.97□□□□□ -1.77
MUC1-221ENST00000610359 TRAV34A0A0B4J273 112 aa3.96□□□□□ -1.78
MUC1-221ENST00000610359 CFC1BP0CG36 223 aa3.96□□□□□ -1.78
MUC1-221ENST00000610359 AP3S2P59780 193 aa3.96□□□□□ -1.78
MUC1-221ENST00000610359 IL15RAQ13261 267 aa3.96□□□□□ -1.78
MUC1-221ENST00000610359 RAB32Q13637 225 aa3.96□□□□□ -1.78
MUC1-221ENST00000610359 ZNF674Q2M3X9 581 aa3.96□□□□□ -1.78
MUC1-221ENST00000610359 SAPCD1Q5SSQ6 148 aa3.96□□□□□ -1.78
MUC1-221ENST00000610359 C5orf17Q8NAS9 161 aa3.96□□□□□ -1.78
MUC1-221ENST00000610359 TMEM243Q9BU79 118 aa3.96□□□□□ -1.78
MUC1-221ENST00000610359 ZNF471Q9BX82 626 aaPredicted RBP3.96□□□□□ -1.78
MUC1-221ENST00000610359 ARL2-SNX15V9GYD0 113 aa3.96□□□□□ -1.78
MUC1-221ENST00000610359 TMSB15BA0A087X1C1 80 aa3.95□□□□□ -1.78
MUC1-221ENST00000610359 KRTAP4-8A0A0G2JLE6 195 aa3.95□□□□□ -1.78
MUC1-221ENST00000610359 FAM168BA1KXE4 195 aa3.95□□□□□ -1.78
MUC1-221ENST00000610359 FAM25EA8MYX2 175 aa3.95□□□□□ -1.78
MUC1-221ENST00000610359 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.95□□□□□ -1.78
MUC1-221ENST00000610359 HMGB3O15347 200 aaKnown RBP3.95□□□□□ -1.78
MUC1-221ENST00000610359 SH2D1AO60880 128 aa3.95□□□□□ -1.78
MUC1-221ENST00000610359 PVALBP20472 110 aaPredicted RBP3.95□□□□□ -1.78
MUC1-221ENST00000610359 RPL12P30050 165 aaKnown RBP3.95□□□□□ -1.78
MUC1-221ENST00000610359 TMBIM6P55061 237 aa3.95□□□□□ -1.78
MUC1-221ENST00000610359 MEF2BQ02080 365 aaPredicted RBP3.95□□□□□ -1.78
MUC1-221ENST00000610359 FAM162BQ5T6X4 162 aa3.95□□□□□ -1.78
MUC1-221ENST00000610359 PQLC2Q6ZP29 291 aa3.95□□□□□ -1.78
MUC1-221ENST00000610359 OR10AG1Q8NH19 301 aa3.95□□□□□ -1.78
MUC1-221ENST00000610359 KCNIP2Q9NS61 270 aa3.95□□□□□ -1.78
MUC1-221ENST00000610359 EPDR1Q9UM22 224 aa3.95□□□□□ -1.78
MUC1-221ENST00000610359 FLGP20930 4061 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms