RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 TRAV8-4A0A0B4J246 113 aa10.99□□□□□ -0.65
CHMP4A-211ENST00000609024 P01737 135 aa10.99□□□□□ -0.65
CHMP4A-211ENST00000609024 SPACA4Q8TDM5 124 aa10.99□□□□□ -0.65
CHMP4A-211ENST00000609024 TRBV6-1A0A0K0K1D8 114 aa10.98□□□□□ -0.65
CHMP4A-211ENST00000609024 GZMBP10144 247 aa10.98□□□□□ -0.65
CHMP4A-211ENST00000609024 ZNF674Q2M3X9 581 aa10.98□□□□□ -0.65
CHMP4A-211ENST00000609024 PRR27Q6MZM9 219 aa10.98□□□□□ -0.65
CHMP4A-211ENST00000609024 WDR73Q6P4I2 378 aa10.98□□□□□ -0.65
CHMP4A-211ENST00000609024 KRTAP26-1Q6PEX3 210 aa10.98□□□□□ -0.65
CHMP4A-211ENST00000609024 REG3GQ6UW15 175 aa10.98□□□□□ -0.65
CHMP4A-211ENST00000609024 NDUFA13Q9P0J0 144 aa10.98□□□□□ -0.65
CHMP4A-211ENST00000609024 KIF25-AS1Q9Y6Z4 181 aa10.98□□□□□ -0.65
CHMP4A-211ENST00000609024 IGHV1-24A0A0C4DH33 117 aa10.97□□□□□ -0.65
CHMP4A-211ENST00000609024 RAB5CP51148 216 aa10.97□□□□□ -0.65
CHMP4A-211ENST00000609024 SPANXN1Q5VSR9 72 aa10.97□□□□□ -0.65
CHMP4A-211ENST00000609024 NTM-AS1Q6ZSK4 140 aa10.97□□□□□ -0.65
CHMP4A-211ENST00000609024 COX8CQ7Z4L0 72 aa10.97□□□□□ -0.65
CHMP4A-211ENST00000609024 PLAC8Q9NZF1 115 aa10.97□□□□□ -0.65
CHMP4A-211ENST00000609024 MARVELD1Q9BSK0 173 aa10.96□□□□□ -0.65
CHMP4A-211ENST00000609024 VAX2Q9UIW0 290 aa10.96□□□□□ -0.65
CHMP4A-211ENST00000609024 CTXND1A0A1B0GTU2 59 aa10.95□□□□□ -0.66
CHMP4A-211ENST00000609024 FAM74A7A6NL05 159 aa10.95□□□□□ -0.66
CHMP4A-211ENST00000609024 UPK1BO75841 260 aa10.95□□□□□ -0.66
CHMP4A-211ENST00000609024 SSTP61278 116 aa10.95□□□□□ -0.66
CHMP4A-211ENST00000609024 MAJINQ3KP22 176 aa10.95□□□□□ -0.66
CHMP4A-211ENST00000609024 CFAP161Q6P656 301 aa10.95□□□□□ -0.66
CHMP4A-211ENST00000609024 OR10AG1Q8NH19 301 aa10.95□□□□□ -0.66
CHMP4A-211ENST00000609024 A0A0J9YXV3 536 aa10.94□□□□□ -0.66
CHMP4A-211ENST00000609024 GAS8-AS1O95177 125 aa10.94□□□□□ -0.66
CHMP4A-211ENST00000609024 PRR3P79522 188 aaKnown RBP10.94□□□□□ -0.66
CHMP4A-211ENST00000609024 IQCJQ1A5X6 159 aa10.94□□□□□ -0.66
CHMP4A-211ENST00000609024 LINC00299Q6ZSB3 139 aa10.94□□□□□ -0.66
CHMP4A-211ENST00000609024 STOML3Q8TAV4 291 aa10.94□□□□□ -0.66
CHMP4A-211ENST00000609024 BORCS7-ASMTA0A0B4J1R7 106 aa10.93□□□□□ -0.66
CHMP4A-211ENST00000609024 IGKV2-24A0A0C4DH68 120 aa10.93□□□□□ -0.66
CHMP4A-211ENST00000609024 AKR1C3P42330 323 aa10.93□□□□□ -0.66
CHMP4A-211ENST00000609024 SULT1A2P50226 295 aa10.93□□□□□ -0.66
CHMP4A-211ENST00000609024 COX6A2Q02221 97 aa10.93□□□□□ -0.66
CHMP4A-211ENST00000609024 ODF1Q14990 250 aa10.93□□□□□ -0.66
CHMP4A-211ENST00000609024 LYPD6BQ8NI32 183 aa10.93□□□□□ -0.66
CHMP4A-211ENST00000609024 MUC21A0A0G2JKD1 596 aa10.92□□□□□ -0.66
CHMP4A-211ENST00000609024 MUC21A0A140T8X8 626 aa10.92□□□□□ -0.66
CHMP4A-211ENST00000609024 H7C1H1 209 aa10.92□□□□□ -0.66
CHMP4A-211ENST00000609024 UBE2L6O14933 153 aa10.92□□□□□ -0.66
CHMP4A-211ENST00000609024 LTAP01374 205 aa10.92□□□□□ -0.66
CHMP4A-211ENST00000609024 DEFA3P59666 94 aa10.92□□□□□ -0.66
CHMP4A-211ENST00000609024 CST9LP1Q5W188 147 aa10.92□□□□□ -0.66
CHMP4A-211ENST00000609024 SPINK6Q6UWN8 80 aa10.92□□□□□ -0.66
CHMP4A-211ENST00000609024 STPG4Q8N801 248 aa10.92□□□□□ -0.66
CHMP4A-211ENST00000609024 AP1S3Q96PC3 154 aa10.92□□□□□ -0.66
CHMP4A-211ENST00000609024 AQP10Q96PS8 301 aa10.92□□□□□ -0.66
CHMP4A-211ENST00000609024 NDUFS6O75380 124 aaKnown RBP10.91□□□□□ -0.66
CHMP4A-211ENST00000609024 SLPIP03973 132 aa10.91□□□□□ -0.66
CHMP4A-211ENST00000609024 RPS10P46783 165 aaKnown RBP10.91□□□□□ -0.66
CHMP4A-211ENST00000609024 DEFA1P59665 94 aa10.91□□□□□ -0.66
CHMP4A-211ENST00000609024 AKR1C8PQ5T2L2 129 aa10.91□□□□□ -0.66
CHMP4A-211ENST00000609024 TCEAL7Q9BRU2 100 aa10.91□□□□□ -0.66
CHMP4A-211ENST00000609024 TMEM243Q9BU79 118 aa10.91□□□□□ -0.66
CHMP4A-211ENST00000609024 MGPP08493 103 aa10.9□□□□□ -0.66
CHMP4A-211ENST00000609024 CXCL1P09341 107 aa10.9□□□□□ -0.66
CHMP4A-211ENST00000609024 ZNF726P1Q15940 193 aa10.9□□□□□ -0.66
CHMP4A-211ENST00000609024 C20orf203Q8NBC4 194 aa10.9□□□□□ -0.66
CHMP4A-211ENST00000609024 A0A1B0GUV1 79 aa10.89□□□□□ -0.67
CHMP4A-211ENST00000609024 INO80EQ8NBZ0 244 aaPredicted RBP10.89□□□□□ -0.67
CHMP4A-211ENST00000609024 SNAI2O43623 268 aa10.88□□□□□ -0.67
CHMP4A-211ENST00000609024 S100A9P06702 114 aaKnown RBP10.88□□□□□ -0.67
CHMP4A-211ENST00000609024 OR5AL1P0C617 328 aa10.88□□□□□ -0.67
CHMP4A-211ENST00000609024 PKIGQ9Y2B9 76 aa10.88□□□□□ -0.67
CHMP4A-211ENST00000609024 IGLV4-60A0A075B6I1 120 aa10.87□□□□□ -0.67
CHMP4A-211ENST00000609024 IGKV3OR2-268A0A0C4DH90 116 aa10.87□□□□□ -0.67
CHMP4A-211ENST00000609024 MAP1LC3B2A6NCE7 125 aa10.87□□□□□ -0.67
CHMP4A-211ENST00000609024 GAGE12HA6NDE8 117 aa10.87□□□□□ -0.67
CHMP4A-211ENST00000609024 KRTAP10-8P60410 259 aa10.87□□□□□ -0.67
CHMP4A-211ENST00000609024 RPL7L1Q6DKI1 246 aaKnown RBP10.87□□□□□ -0.67
CHMP4A-211ENST00000609024 PRSS3P2Q8NHM4 247 aa10.87□□□□□ -0.67
CHMP4A-211ENST00000609024 MAP1LC3BQ9GZQ8 125 aa10.87□□□□□ -0.67
CHMP4A-211ENST00000609024 LINC00474Q9P2X8 69 aa10.87□□□□□ -0.67
CHMP4A-211ENST00000609024 FHITP49789 147 aa10.86□□□□□ -0.67
CHMP4A-211ENST00000609024 HIGD2BQ4VC39 106 aa10.86□□□□□ -0.67
CHMP4A-211ENST00000609024 SSBP4Q9BWG4 385 aaPredicted RBP10.86□□□□□ -0.67
CHMP4A-211ENST00000609024 NKX2-5P52952 324 aaPredicted RBP10.85□□□□□ -0.67
CHMP4A-211ENST00000609024 IFITM3Q01628 133 aa10.85□□□□□ -0.67
CHMP4A-211ENST00000609024 C15orf56Q8N910 161 aa10.85□□□□□ -0.67
CHMP4A-211ENST00000609024 TPPP3Q9BW30 176 aa10.85□□□□□ -0.67
CHMP4A-211ENST00000609024 M0QY20 66 aa10.84□□□□□ -0.67
CHMP4A-211ENST00000609024 BAGE2Q86Y30 109 aa10.84□□□□□ -0.67
CHMP4A-211ENST00000609024 GFRA4Q9GZZ7 299 aa10.84□□□□□ -0.67
CHMP4A-211ENST00000609024 AMTP48728 403 aa10.83□□□□□ -0.68
CHMP4A-211ENST00000609024 Q6ZRP5 223 aa10.83□□□□□ -0.68
CHMP4A-211ENST00000609024 PFDN1O60925 122 aa10.82□□□□□ -0.68
CHMP4A-211ENST00000609024 COTL1Q14019 142 aa10.82□□□□□ -0.68
CHMP4A-211ENST00000609024 SUMO4Q6EEV6 95 aa10.82□□□□□ -0.68
CHMP4A-211ENST00000609024 RASL11AQ6T310 242 aa10.82□□□□□ -0.68
CHMP4A-211ENST00000609024 A0A096LNI7 61 aa10.81□□□□□ -0.68
CHMP4A-211ENST00000609024 PAGE4O60829 102 aa10.81□□□□□ -0.68
CHMP4A-211ENST00000609024 AMMECR1LQ6DCA0 310 aa10.81□□□□□ -0.68
CHMP4A-211ENST00000609024 PGLYRP4Q96LB8 373 aa10.81□□□□□ -0.68
CHMP4A-211ENST00000609024 MED28Q9H204 178 aa10.81□□□□□ -0.68
CHMP4A-211ENST00000609024 ALG5Q9Y673 324 aa10.81□□□□□ -0.68
CHMP4A-211ENST00000609024 FXYD6-FXYD2A0A087WZ82 144 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms