RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 DNAH17Q9UFH2 4485 aa8.07□□□□□ -1.12
LINC00539-204ENST00000608957 HECTD4Q9Y4D8 3996 aa8.07□□□□□ -1.12
LINC00539-204ENST00000608957 CRYGDP07320 174 aa8.07□□□□□ -1.12
LINC00539-204ENST00000608957 P0DMU3 169 aa8.07□□□□□ -1.12
LINC00539-204ENST00000608957 FAM231AP0DMU4 169 aa8.07□□□□□ -1.12
LINC00539-204ENST00000608957 FAM231CP0DMU5 169 aa8.07□□□□□ -1.12
LINC00539-204ENST00000608957 LINC00315P59091 139 aa8.07□□□□□ -1.12
LINC00539-204ENST00000608957 LGALS9BQ3B8N2 356 aa8.07□□□□□ -1.12
LINC00539-204ENST00000608957 FAM74A4Q5TZK3 123 aa8.07□□□□□ -1.12
LINC00539-204ENST00000608957 LINC00612Q8N6U2 182 aa8.07□□□□□ -1.12
LINC00539-204ENST00000608957 RASL10AQ92737 203 aa8.07□□□□□ -1.12
LINC00539-204ENST00000608957 PRELID3AQ96N28 172 aa8.07□□□□□ -1.12
LINC00539-204ENST00000608957 SAMD10Q9BYL1 202 aa8.07□□□□□ -1.12
LINC00539-204ENST00000608957 LAMTOR2Q9Y2Q5 125 aa8.07□□□□□ -1.12
LINC00539-204ENST00000608957 TRAV26-2A0A0B4J265 109 aa8.06□□□□□ -1.12
LINC00539-204ENST00000608957 C5orf52A6NGY3 159 aa8.06□□□□□ -1.12
LINC00539-204ENST00000608957 RHODO00212 210 aa8.06□□□□□ -1.12
LINC00539-204ENST00000608957 NPYP01303 97 aa8.06□□□□□ -1.12
LINC00539-204ENST00000608957 ZNF56Q15929 161 aa8.06□□□□□ -1.12
LINC00539-204ENST00000608957 IQCJQ1A5X6 159 aa8.06□□□□□ -1.12
LINC00539-204ENST00000608957 CFAP126Q5VTH2 177 aa8.06□□□□□ -1.12
LINC00539-204ENST00000608957 Q6ZTI0 123 aa8.06□□□□□ -1.12
LINC00539-204ENST00000608957 BAGE3Q86Y29 109 aa8.06□□□□□ -1.12
LINC00539-204ENST00000608957 FAT2Q9NYQ8 4349 aa8.06□□□□□ -1.12
LINC00539-204ENST00000608957 DNAH2Q9P225 4427 aa8.05□□□□□ -1.12
LINC00539-204ENST00000608957 F5H768 121 aa8.05□□□□□ -1.12
LINC00539-204ENST00000608957 M0R2N4 97 aa8.05□□□□□ -1.12
LINC00539-204ENST00000608957 RS1O15537 224 aa8.05□□□□□ -1.12
LINC00539-204ENST00000608957 GAS8-AS1O95177 125 aa8.05□□□□□ -1.12
LINC00539-204ENST00000608957 SNRPEP62304 92 aaKnown RBP8.05□□□□□ -1.12
LINC00539-204ENST00000608957 SUMO4Q6EEV6 95 aa8.05□□□□□ -1.12
LINC00539-204ENST00000608957 UFSP1Q6NVU6 142 aa8.05□□□□□ -1.12
LINC00539-204ENST00000608957 NRACQ8N912 160 aa8.05□□□□□ -1.12
LINC00539-204ENST00000608957 IGLV2-18A0A075B6J9 118 aa8.04□□□□□ -1.12
LINC00539-204ENST00000608957 TRAV4A0A0B4J268 109 aa8.04□□□□□ -1.12
LINC00539-204ENST00000608957 F5H697 171 aa8.04□□□□□ -1.12
LINC00539-204ENST00000608957 RTL8CO15255 209 aa8.04□□□□□ -1.12
LINC00539-204ENST00000608957 SERF1AO75920 110 aa8.04□□□□□ -1.12
LINC00539-204ENST00000608957 TNFRSF6BO95407 300 aa8.04□□□□□ -1.12
LINC00539-204ENST00000608957 ATP5G1P05496 136 aa8.04□□□□□ -1.12
LINC00539-204ENST00000608957 GATA1P15976 413 aaPredicted RBP8.04□□□□□ -1.12
LINC00539-204ENST00000608957 HOXA5P20719 270 aa8.04□□□□□ -1.12
LINC00539-204ENST00000608957 LINC00310P59036 64 aa8.04□□□□□ -1.12
LINC00539-204ENST00000608957 Q6ZR54 194 aa8.04□□□□□ -1.12
LINC00539-204ENST00000608957 MAP1LC3AQ9H492 121 aa8.04□□□□□ -1.12
LINC00539-204ENST00000608957 GAGE12BA1L429 117 aa8.03□□□□□ -1.12
LINC00539-204ENST00000608957 GAGE7O76087 117 aa8.03□□□□□ -1.12
LINC00539-204ENST00000608957 PPP1R17O96001 155 aa8.03□□□□□ -1.12
LINC00539-204ENST00000608957 GAGE12FP0CL80 117 aa8.03□□□□□ -1.12
LINC00539-204ENST00000608957 GAGE12GP0CL81 117 aa8.03□□□□□ -1.12
LINC00539-204ENST00000608957 GAGE12IP0CL82 117 aa8.03□□□□□ -1.12
LINC00539-204ENST00000608957 ZFP2Q6ZN57 461 aa8.03□□□□□ -1.12
LINC00539-204ENST00000608957 UBE2DNLQ8IWF7 75 aa8.03□□□□□ -1.12
LINC00539-204ENST00000608957 HIST3H2BBQ8N257 126 aa8.03□□□□□ -1.12
LINC00539-204ENST00000608957 C15orf53Q8NAA6 179 aa8.03□□□□□ -1.12
LINC00539-204ENST00000608957 OR4C5Q8NGB2 326 aa8.03□□□□□ -1.12
LINC00539-204ENST00000608957 TRGV2A0A075B6R0 118 aa8.02□□□□□ -1.13
LINC00539-204ENST00000608957 IGHV3-73A0A0B4J1V6 119 aa8.02□□□□□ -1.13
LINC00539-204ENST00000608957 A0A1B0GVY2 172 aa8.02□□□□□ -1.13
LINC00539-204ENST00000608957 H7C1H1 209 aa8.02□□□□□ -1.13
LINC00539-204ENST00000608957 ESDP10768 282 aa8.02□□□□□ -1.13
LINC00539-204ENST00000608957 PDZD11Q5EBL8 140 aa8.02□□□□□ -1.13
LINC00539-204ENST00000608957 RNASEKQ6P5S7 137 aaKnown RBP8.02□□□□□ -1.13
LINC00539-204ENST00000608957 RPL39LQ96EH5 51 aaKnown RBP8.02□□□□□ -1.13
LINC00539-204ENST00000608957 LOC389332A0A1B0GUA5 103 aa8.01□□□□□ -1.13
LINC00539-204ENST00000608957 LOC105371267A0A1B0GV96 52 aa8.01□□□□□ -1.13
LINC00539-204ENST00000608957 M0QY20 66 aa8.01□□□□□ -1.13
LINC00539-204ENST00000608957 CIDEAO60543 219 aa8.01□□□□□ -1.13
LINC00539-204ENST00000608957 NUDT3O95989 172 aa8.01□□□□□ -1.13
LINC00539-204ENST00000608957 IGHV3-53P01767 116 aa8.01□□□□□ -1.13
LINC00539-204ENST00000608957 S100A2P29034 98 aa8.01□□□□□ -1.13
LINC00539-204ENST00000608957 FA2HQ7L5A8 372 aa8.01□□□□□ -1.13
LINC00539-204ENST00000608957 NIT1Q86X76 327 aa8.01□□□□□ -1.13
LINC00539-204ENST00000608957 PRSS3P2Q8NHM4 247 aa8.01□□□□□ -1.13
LINC00539-204ENST00000608957 CHCHD1Q96BP2 118 aaKnown RBP8.01□□□□□ -1.13
LINC00539-204ENST00000608957 URB1-AS1Q96HZ7 61 aa8.01□□□□□ -1.13
LINC00539-204ENST00000608957 ZNF479Q96JC4 524 aa8.01□□□□□ -1.13
LINC00539-204ENST00000608957 C18orf15Q96N68 181 aa8.01□□□□□ -1.13
LINC00539-204ENST00000608957 C20orf78Q9BR46 151 aa8.01□□□□□ -1.13
LINC00539-204ENST00000608957 PRSS47A8MTI9 375 aa8□□□□□ -1.13
LINC00539-204ENST00000608957 NUPR1O60356 82 aa8□□□□□ -1.13
LINC00539-204ENST00000608957 HSBP1O75506 76 aa8□□□□□ -1.13
LINC00539-204ENST00000608957 LINC00614P0C842 121 aa8□□□□□ -1.13
LINC00539-204ENST00000608957 PMCHP20382 165 aa8□□□□□ -1.13
LINC00539-204ENST00000608957 IFI27P40305 119 aaPredicted RBP8□□□□□ -1.13
LINC00539-204ENST00000608957 SUMO2P61956 95 aaKnown RBP8□□□□□ -1.13
LINC00539-204ENST00000608957 NXT2Q9NPJ8 142 aaKnown RBP8□□□□□ -1.13
LINC00539-204ENST00000608957 LINC00588Q9Y4M8 146 aa8□□□□□ -1.13
LINC00539-204ENST00000608957 TRAV26-1A0A087WT03 109 aa7.99□□□□□ -1.13
LINC00539-204ENST00000608957 A0A0J9YY99 117 aa7.99□□□□□ -1.13
LINC00539-204ENST00000608957 TRBV6-5A0A0K0K1A5 114 aa7.99□□□□□ -1.13
LINC00539-204ENST00000608957 IFITM10A6NMD0 228 aa7.99□□□□□ -1.13
LINC00539-204ENST00000608957 Q8N8P6 123 aa7.99□□□□□ -1.13
LINC00539-204ENST00000608957 ZNRF2Q8NHG8 242 aa7.99□□□□□ -1.13
LINC00539-204ENST00000608957 SMIM2Q9BVW6 85 aa7.99□□□□□ -1.13
LINC00539-204ENST00000608957 ST20Q9HBF5 79 aa7.99□□□□□ -1.13
LINC00539-204ENST00000608957 NIT2Q9NQR4 276 aa7.99□□□□□ -1.13
LINC00539-204ENST00000608957 AP5S1Q9NUS5 200 aa7.99□□□□□ -1.13
LINC00539-204ENST00000608957 K7EQD1 137 aa7.98□□□□□ -1.13
LINC00539-204ENST00000608957 AMTP48728 403 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms