RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 LINC01600Q96MT4 127 aa9.27□□□□□ -0.93
CDCA3-212ENST00000604599 VPREB3Q9UKI3 123 aa9.27□□□□□ -0.93
CDCA3-212ENST00000604599 HRNRQ86YZ3 2850 aaPredicted RBP9.27□□□□□ -0.93
CDCA3-212ENST00000604599 TRAV8-3A0A0A6YYJ7 113 aa9.27□□□□□ -0.93
CDCA3-212ENST00000604599 TRBV12-3P01733 135 aa9.27□□□□□ -0.93
CDCA3-212ENST00000604599 IGHV3-30-3P0DP02 117 aa9.27□□□□□ -0.93
CDCA3-212ENST00000604599 LINC01587Q99440 93 aa9.27□□□□□ -0.93
CDCA3-212ENST00000604599 FAM236AA0A1B0GUQ0 79 aa9.26□□□□□ -0.93
CDCA3-212ENST00000604599 FAM236BA0A1B0GV22 79 aa9.26□□□□□ -0.93
CDCA3-212ENST00000604599 H3BT86 120 aa9.26□□□□□ -0.93
CDCA3-212ENST00000604599 ADAMTSL4-AS1Q5T5F5 129 aa9.26□□□□□ -0.93
CDCA3-212ENST00000604599 ZFHX2Q9C0A1 2572 aaPredicted RBP9.26□□□□□ -0.93
CDCA3-212ENST00000604599 SOCS3O14543 225 aa9.26□□□□□ -0.93
CDCA3-212ENST00000604599 COX6CP09669 75 aa9.26□□□□□ -0.93
CDCA3-212ENST00000604599 LITAFQ99732 161 aa9.26□□□□□ -0.93
CDCA3-212ENST00000604599 AKAP6Q13023 2319 aa9.26□□□□□ -0.93
CDCA3-212ENST00000604599 TRGV11A0A075B6L2 103 aa9.25□□□□□ -0.93
CDCA3-212ENST00000604599 IGHV1-69P01742 117 aa9.25□□□□□ -0.93
CDCA3-212ENST00000604599 SPTA1P02549 2419 aa9.25□□□□□ -0.93
CDCA3-212ENST00000604599 CELSR1Q9NYQ6 3014 aa9.25□□□□□ -0.93
CDCA3-212ENST00000604599 OOSP1A8MZH6 123 aa9.25□□□□□ -0.93
CDCA3-212ENST00000604599 MINOS1Q5TGZ0 78 aa9.25□□□□□ -0.93
CDCA3-212ENST00000604599 FAM19A4Q96LR4 140 aa9.25□□□□□ -0.93
CDCA3-212ENST00000604599 TIMM21Q9BVV7 248 aa9.25□□□□□ -0.93
CDCA3-212ENST00000604599 MINOS1-NBL1R4GNA1 71 aa9.25□□□□□ -0.93
CDCA3-212ENST00000604599 TLN1Q9Y490 2541 aaKnown RBP9.25□□□□□ -0.93
CDCA3-212ENST00000604599 GRNP28799 593 aaKnown RBP9.25□□□□□ -0.93
CDCA3-212ENST00000604599 MRPL23Q16540 153 aaKnown RBP9.25□□□□□ -0.93
CDCA3-212ENST00000604599 SPANXA1Q9NS26 97 aa9.25□□□□□ -0.93
CDCA3-212ENST00000604599 COL6A6A6NMZ7 2263 aa9.24□□□□□ -0.93
CDCA3-212ENST00000604599 TRAV12-3A0A0B4J271 114 aa9.24□□□□□ -0.93
CDCA3-212ENST00000604599 A0A0J9YX75 114 aa9.24□□□□□ -0.93
CDCA3-212ENST00000604599 A8MZ25 164 aa9.24□□□□□ -0.93
CDCA3-212ENST00000604599 ZFP36P26651 326 aaKnown RBP9.24□□□□□ -0.93
CDCA3-212ENST00000604599 CEMP1Q6PRD7 247 aaPredicted RBP9.24□□□□□ -0.93
CDCA3-212ENST00000604599 IGLV4-3A0A075B6K6 122 aa9.24□□□□□ -0.93
CDCA3-212ENST00000604599 FAM240AA0A1B0GVK7 77 aa9.24□□□□□ -0.93
CDCA3-212ENST00000604599 NSUN5P1Q3KNT7 163 aa9.24□□□□□ -0.93
CDCA3-212ENST00000604599 RNASE13Q5GAN3 156 aaKnown RBP9.24□□□□□ -0.93
CDCA3-212ENST00000604599 TMEM101Q96IK0 257 aa9.24□□□□□ -0.93
CDCA3-212ENST00000604599 TRBV7-7A0A0K0K1E9 115 aa9.23□□□□□ -0.93
CDCA3-212ENST00000604599 I3L3M4 83 aa9.23□□□□□ -0.93
CDCA3-212ENST00000604599 LST1O00453 97 aa9.23□□□□□ -0.93
CDCA3-212ENST00000604599 ID1P41134 155 aa9.23□□□□□ -0.93
CDCA3-212ENST00000604599 TMEM219Q86XT9 240 aa9.23□□□□□ -0.93
CDCA3-212ENST00000604599 C20orf203Q8NBC4 194 aa9.23□□□□□ -0.93
CDCA3-212ENST00000604599 TMEM126AQ9H061 195 aa9.23□□□□□ -0.93
CDCA3-212ENST00000604599 TRBV6-5A0A0K0K1A5 114 aa9.22□□□□□ -0.93
CDCA3-212ENST00000604599 M0QY20 66 aa9.22□□□□□ -0.93
CDCA3-212ENST00000604599 APRG1Q8IVJ8 170 aa9.22□□□□□ -0.93
CDCA3-212ENST00000604599 YAE1D1Q9NRH1 226 aa9.22□□□□□ -0.93
CDCA3-212ENST00000604599 NDUFA12Q9UI09 145 aa9.22□□□□□ -0.93
CDCA3-212ENST00000604599 SAA4P35542 130 aa9.22□□□□□ -0.93
CDCA3-212ENST00000604599 KLK9Q2XQG4 91 aa9.22□□□□□ -0.93
CDCA3-212ENST00000604599 DAND5Q8N907 189 aa9.22□□□□□ -0.93
CDCA3-212ENST00000604599 KLK9Q9UKQ9 250 aa9.22□□□□□ -0.93
CDCA3-212ENST00000604599 IGHV3-11P01762 117 aa9.21□□□□□ -0.93
CDCA3-212ENST00000604599 RHOHQ15669 191 aa9.21□□□□□ -0.93
CDCA3-212ENST00000604599 SORL1Q92673 2214 aa9.21□□□□□ -0.93
CDCA3-212ENST00000604599 SPTAN1Q13813 2472 aaKnown RBP9.21□□□□□ -0.93
CDCA3-212ENST00000604599 LINC00694P0DN24 101 aa9.21□□□□□ -0.93
CDCA3-212ENST00000604599 CD28P10747 220 aa9.21□□□□□ -0.93
CDCA3-212ENST00000604599 C9orf153Q5TBE3 101 aa9.21□□□□□ -0.94
CDCA3-212ENST00000604599 KLLNB2CW77 178 aa9.2□□□□□ -0.94
CDCA3-212ENST00000604599 MIAQ16674 131 aa9.2□□□□□ -0.94
CDCA3-212ENST00000604599 TMEM61Q8N0U2 210 aa9.2□□□□□ -0.94
CDCA3-212ENST00000604599 TRAV41A0A0B4J266 112 aa9.2□□□□□ -0.94
CDCA3-212ENST00000604599 IGKV3-20P01619 116 aa9.2□□□□□ -0.94
CDCA3-212ENST00000604599 DEFB121Q5J5C9 76 aa9.2□□□□□ -0.94
CDCA3-212ENST00000604599 DUX5Q96PT3 197 aa9.2□□□□□ -0.94
CDCA3-212ENST00000604599 TRAV12-2A0A075B6T6 113 aa9.19□□□□□ -0.94
CDCA3-212ENST00000604599 Q8NA96 180 aa9.19□□□□□ -0.94
CDCA3-212ENST00000604599 SIRPDQ9H106 197 aa9.19□□□□□ -0.94
CDCA3-212ENST00000604599 C5orf56Q8N8D9 126 aa9.19□□□□□ -0.94
CDCA3-212ENST00000604599 SMCR5Q8TEV8 140 aa9.19□□□□□ -0.94
CDCA3-212ENST00000604599 SPANXDQ9BXN6 97 aa9.19□□□□□ -0.94
CDCA3-212ENST00000604599 SPANXCQ9NY87 97 aa9.19□□□□□ -0.94
CDCA3-212ENST00000604599 LOC107984640A0A0U1RRK4 108 aa9.18□□□□□ -0.94
CDCA3-212ENST00000604599 EDN2P20800 178 aa9.18□□□□□ -0.94
CDCA3-212ENST00000604599 IGHV1-58A0A0C4DH39 117 aa9.18□□□□□ -0.94
CDCA3-212ENST00000604599 RHPN1-AS1Q9BWJ2 59 aa9.18□□□□□ -0.94
CDCA3-212ENST00000604599 KLK5Q9Y337 293 aaPredicted RBP9.18□□□□□ -0.94
CDCA3-212ENST00000604599 NDUFA4O00483 81 aa9.18□□□□□ -0.94
CDCA3-212ENST00000604599 IGHV3-16A0A0C4DH30 117 aa9.17□□□□□ -0.94
CDCA3-212ENST00000604599 FAM223BA6NKX1 122 aa9.17□□□□□ -0.94
CDCA3-212ENST00000604599 FAM223AQ8IWN6 122 aa9.17□□□□□ -0.94
CDCA3-212ENST00000604599 NDUFA7O95182 113 aa9.16□□□□□ -0.94
CDCA3-212ENST00000604599 MRPS36P82909 103 aaKnown RBP9.16□□□□□ -0.94
CDCA3-212ENST00000604599 FAM104AQ969W3 186 aa9.16□□□□□ -0.94
CDCA3-212ENST00000604599 COL12A1Q99715 3063 aa9.16□□□□□ -0.94
CDCA3-212ENST00000604599 IGHV3OR16-10A0A075B7F0 116 aa9.16□□□□□ -0.94
CDCA3-212ENST00000604599 IGHV3-73A0A0B4J1V6 119 aa9.16□□□□□ -0.94
CDCA3-212ENST00000604599 C3orf22Q8N5N4 141 aa9.16□□□□□ -0.94
CDCA3-212ENST00000604599 VSIG2Q96IQ7 327 aa9.16□□□□□ -0.94
CDCA3-212ENST00000604599 C9orf85Q96MD7 179 aa9.16□□□□□ -0.94
CDCA3-212ENST00000604599 CEP295Q9C0D2 2601 aa9.15□□□□□ -0.94
CDCA3-212ENST00000604599 HERVK_113P63121 156 aa9.15□□□□□ -0.94
CDCA3-212ENST00000604599 A0A0U1RRA0 63 aa9.15□□□□□ -0.95
CDCA3-212ENST00000604599 DNAJC30Q96LL9 226 aa9.15□□□□□ -0.95
CDCA3-212ENST00000604599 NACAE9PAV3 2078 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms