RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 STPG4Q8N801 248 aa9.93□□□□□ -0.82
SSBP4-211ENST00000601614 IGLV4-60A0A075B6I1 120 aa9.92□□□□□ -0.82
SSBP4-211ENST00000601614 KRTAP9-6A0A140TA67 174 aa9.92□□□□□ -0.82
SSBP4-211ENST00000601614 OR10AG1Q8NH19 301 aa9.92□□□□□ -0.82
SSBP4-211ENST00000601614 DERL1Q9BUN8 251 aa9.92□□□□□ -0.82
SSBP4-211ENST00000601614 TMEM167BQ9NRX6 74 aa9.92□□□□□ -0.82
SSBP4-211ENST00000601614 TRBV25-1A0A075B6N4 114 aa9.91□□□□□ -0.82
SSBP4-211ENST00000601614 A0A1W2PRE2 83 aa9.91□□□□□ -0.82
SSBP4-211ENST00000601614 PEX7O00628 323 aa9.91□□□□□ -0.82
SSBP4-211ENST00000601614 NDUFS6O75380 124 aaKnown RBP9.91□□□□□ -0.82
SSBP4-211ENST00000601614 IQCJQ1A5X6 159 aa9.91□□□□□ -0.82
SSBP4-211ENST00000601614 ZNF674Q2M3X9 581 aa9.91□□□□□ -0.82
SSBP4-211ENST00000601614 FAM162BQ5T6X4 162 aa9.91□□□□□ -0.82
SSBP4-211ENST00000601614 A0A096LNI7 61 aa9.9□□□□□ -0.82
SSBP4-211ENST00000601614 TRAV8-4A0A0B4J246 113 aa9.9□□□□□ -0.82
SSBP4-211ENST00000601614 CXorf1O96002 111 aa9.9□□□□□ -0.82
SSBP4-211ENST00000601614 P01737 135 aa9.9□□□□□ -0.82
SSBP4-211ENST00000601614 TMEM97Q5BJF2 176 aa9.9□□□□□ -0.82
SSBP4-211ENST00000601614 INO80EQ8NBZ0 244 aaPredicted RBP9.9□□□□□ -0.82
SSBP4-211ENST00000601614 IFNA7P01567 189 aa9.89□□□□□ -0.83
SSBP4-211ENST00000601614 DEFA3P59666 94 aa9.89□□□□□ -0.83
SSBP4-211ENST00000601614 UBE2G2P60604 165 aa9.89□□□□□ -0.83
SSBP4-211ENST00000601614 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.89□□□□□ -0.83
SSBP4-211ENST00000601614 MUC21A0A140T8X8 626 aa9.88□□□□□ -0.83
SSBP4-211ENST00000601614 PET100P0DJ07 73 aa9.88□□□□□ -0.83
SSBP4-211ENST00000601614 ATP6V0CP27449 155 aa9.88□□□□□ -0.83
SSBP4-211ENST00000601614 RPS10P46783 165 aaKnown RBP9.88□□□□□ -0.83
SSBP4-211ENST00000601614 HIGD2BQ4VC39 106 aa9.88□□□□□ -0.83
SSBP4-211ENST00000601614 CCDC32Q9BV29 185 aa9.88□□□□□ -0.83
SSBP4-211ENST00000601614 IGHV1-24A0A0C4DH33 117 aa9.87□□□□□ -0.83
SSBP4-211ENST00000601614 GZMBP10144 247 aa9.87□□□□□ -0.83
SSBP4-211ENST00000601614 ZNF726P1Q15940 193 aa9.87□□□□□ -0.83
SSBP4-211ENST00000601614 PSMG3Q9BT73 122 aaPredicted RBP9.87□□□□□ -0.83
SSBP4-211ENST00000601614 ZFP30Q9Y2G7 519 aa9.87□□□□□ -0.83
SSBP4-211ENST00000601614 F5H697 171 aa9.86□□□□□ -0.83
SSBP4-211ENST00000601614 H7C1H1 209 aa9.86□□□□□ -0.83
SSBP4-211ENST00000601614 MZT2BQ6NZ67 158 aa9.86□□□□□ -0.83
SSBP4-211ENST00000601614 A0A1B0GUV1 79 aa9.85□□□□□ -0.83
SSBP4-211ENST00000601614 FAM74A7A6NL05 159 aa9.85□□□□□ -0.83
SSBP4-211ENST00000601614 HIST1H2BAQ96A08 127 aa9.85□□□□□ -0.83
SSBP4-211ENST00000601614 ZNF471Q9BX82 626 aaPredicted RBP9.85□□□□□ -0.83
SSBP4-211ENST00000601614 ACTR3CQ9C0K3 210 aaPredicted RBP9.85□□□□□ -0.83
SSBP4-211ENST00000601614 FAT4Q6V0I7 4981 aa9.84□□□□□ -0.83
SSBP4-211ENST00000601614 GAGE12HA6NDE8 117 aa9.84□□□□□ -0.83
SSBP4-211ENST00000601614 SNAI2O43623 268 aa9.84□□□□□ -0.83
SSBP4-211ENST00000601614 SSTP61278 116 aa9.84□□□□□ -0.83
SSBP4-211ENST00000601614 Q6ZRP5 223 aa9.84□□□□□ -0.83
SSBP4-211ENST00000601614 AQP10Q96PS8 301 aa9.84□□□□□ -0.83
SSBP4-211ENST00000601614 SSBP4Q9BWG4 385 aaPredicted RBP9.84□□□□□ -0.83
SSBP4-211ENST00000601614 LTAP01374 205 aa9.83□□□□□ -0.84
SSBP4-211ENST00000601614 MBP02144 154 aa9.83□□□□□ -0.84
SSBP4-211ENST00000601614 SERF2P84101 59 aa9.83□□□□□ -0.84
SSBP4-211ENST00000601614 ENKURQ8TC29 256 aa9.83□□□□□ -0.84
SSBP4-211ENST00000601614 FMC1Q96HJ9 113 aa9.83□□□□□ -0.84
SSBP4-211ENST00000601614 TNFSF18Q9UNG2 199 aa9.83□□□□□ -0.84
SSBP4-211ENST00000601614 INMT-MINDY4F8WBC2 141 aa9.82□□□□□ -0.84
SSBP4-211ENST00000601614 LCE2AQ5TA79 106 aaPredicted RBP9.82□□□□□ -0.84
SSBP4-211ENST00000601614 TMEM243Q9BU79 118 aa9.82□□□□□ -0.84
SSBP4-211ENST00000601614 M0QY20 66 aa9.81□□□□□ -0.84
SSBP4-211ENST00000601614 UBE2G1P62253 170 aa9.81□□□□□ -0.84
SSBP4-211ENST00000601614 SPANXN1Q5VSR9 72 aa9.81□□□□□ -0.84
SSBP4-211ENST00000601614 GVQW2A0A096LPI5 108 aaPredicted RBP9.8□□□□□ -0.84
SSBP4-211ENST00000601614 CXCL1P09341 107 aa9.8□□□□□ -0.84
SSBP4-211ENST00000601614 SULT1A2P50226 295 aa9.8□□□□□ -0.84
SSBP4-211ENST00000601614 CFAP161Q6P656 301 aa9.8□□□□□ -0.84
SSBP4-211ENST00000601614 NDUFA13Q9P0J0 144 aa9.8□□□□□ -0.84
SSBP4-211ENST00000601614 IGKV3OR2-268A0A0C4DH90 116 aa9.79□□□□□ -0.84
SSBP4-211ENST00000601614 CTXND1A0A1B0GTU2 59 aa9.79□□□□□ -0.84
SSBP4-211ENST00000601614 FAM231BA6NCW3 169 aa9.79□□□□□ -0.84
SSBP4-211ENST00000601614 A6NHS1 94 aa9.79□□□□□ -0.84
SSBP4-211ENST00000601614 SSNA1O43805 119 aa9.79□□□□□ -0.84
SSBP4-211ENST00000601614 OR5AL1P0C617 328 aa9.79□□□□□ -0.84
SSBP4-211ENST00000601614 NKX2-5P52952 324 aaPredicted RBP9.79□□□□□ -0.84
SSBP4-211ENST00000601614 IFITM3Q01628 133 aa9.78□□□□□ -0.84
SSBP4-211ENST00000601614 SUMO4Q6EEV6 95 aa9.78□□□□□ -0.84
SSBP4-211ENST00000601614 LINC00526Q96FQ7 95 aa9.78□□□□□ -0.84
SSBP4-211ENST00000601614 NKX6-2Q9C056 277 aaPredicted RBP9.78□□□□□ -0.84
SSBP4-211ENST00000601614 MGPP08493 103 aa9.77□□□□□ -0.85
SSBP4-211ENST00000601614 PRR26Q8N8Z3 221 aa9.77□□□□□ -0.85
SSBP4-211ENST00000601614 CHCHD10Q8WYQ3 142 aaPredicted RBP9.77□□□□□ -0.85
SSBP4-211ENST00000601614 AP1S3Q96PC3 154 aa9.77□□□□□ -0.85
SSBP4-211ENST00000601614 MARVELD1Q9BSK0 173 aa9.77□□□□□ -0.85
SSBP4-211ENST00000601614 SMIM17P0DL12 118 aa9.76□□□□□ -0.85
SSBP4-211ENST00000601614 LINC00474Q9P2X8 69 aa9.76□□□□□ -0.85
SSBP4-211ENST00000601614 AKR1C3P42330 323 aa9.75□□□□□ -0.85
SSBP4-211ENST00000601614 PGLYRP4Q96LB8 373 aa9.75□□□□□ -0.85
SSBP4-211ENST00000601614 A0A0U1RQV1 116 aa9.74□□□□□ -0.85
SSBP4-211ENST00000601614 UBE2L6O14933 153 aa9.74□□□□□ -0.85
SSBP4-211ENST00000601614 FOXI1Q12951 378 aa9.74□□□□□ -0.85
SSBP4-211ENST00000601614 RPL7L1Q6DKI1 246 aaKnown RBP9.74□□□□□ -0.85
SSBP4-211ENST00000601614 ZNF664Q8N3J9 261 aa9.74□□□□□ -0.85
SSBP4-211ENST00000601614 MLST8Q9BVC4 326 aa9.74□□□□□ -0.85
SSBP4-211ENST00000601614 PSORS1C2Q9UIG4 136 aa9.74□□□□□ -0.85
SSBP4-211ENST00000601614 A0A1W2PNN7 141 aa9.73□□□□□ -0.85
SSBP4-211ENST00000601614 UPK1BO75841 260 aa9.73□□□□□ -0.85
SSBP4-211ENST00000601614 AMTP48728 403 aa9.72□□□□□ -0.85
SSBP4-211ENST00000601614 CST9LP1Q5W188 147 aa9.72□□□□□ -0.85
SSBP4-211ENST00000601614 RASL11AQ6T310 242 aa9.72□□□□□ -0.85
SSBP4-211ENST00000601614 CARD19Q96LW7 228 aa9.72□□□□□ -0.85
SSBP4-211ENST00000601614 TRAV26-2A0A0B4J265 109 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms