RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 HTN1P15515 57 aa10.64□□□□□ -0.71
SMG9-211ENST00000601170 SLURP1P55000 103 aa10.64□□□□□ -0.71
SMG9-211ENST00000601170 DEFB136Q30KP8 78 aa10.64□□□□□ -0.71
SMG9-211ENST00000601170 GAGE13Q4V321 117 aa10.64□□□□□ -0.71
SMG9-211ENST00000601170 C20orf203Q8NBC4 194 aa10.64□□□□□ -0.71
SMG9-211ENST00000601170 C18orf65Q6ZTR6 163 aa10.63□□□□□ -0.71
SMG9-211ENST00000601170 NFE4Q86UQ8 179 aa10.63□□□□□ -0.71
SMG9-211ENST00000601170 PRO0461Q9UI25 63 aa10.63□□□□□ -0.71
SMG9-211ENST00000601170 J3QQQ9 107 aa10.63□□□□□ -0.71
SMG9-211ENST00000601170 APOMO95445 188 aa10.63□□□□□ -0.71
SMG9-211ENST00000601170 TSPAN13O95857 204 aa10.62□□□□□ -0.71
SMG9-211ENST00000601170 DEFB131AP59861 70 aa10.62□□□□□ -0.71
SMG9-211ENST00000601170 ETDBQ3ZM63 59 aa10.62□□□□□ -0.71
SMG9-211ENST00000601170 SH2D6Q7Z4S9 175 aa10.62□□□□□ -0.71
SMG9-211ENST00000601170 AMELXQ99217 191 aa10.62□□□□□ -0.71
SMG9-211ENST00000601170 IGHV4-31P0DP07 118 aa10.62□□□□□ -0.71
SMG9-211ENST00000601170 LGALS3P17931 250 aaKnown RBP10.62□□□□□ -0.71
SMG9-211ENST00000601170 SLC25A29Q8N8R3 303 aa10.62□□□□□ -0.71
SMG9-211ENST00000601170 USP9YO00507 2555 aaPredicted RBP10.62□□□□□ -0.71
SMG9-211ENST00000601170 MXRA5Q9NR99 2828 aa10.61□□□□□ -0.71
SMG9-211ENST00000601170 CR1P17927 2039 aa10.61□□□□□ -0.71
SMG9-211ENST00000601170 IGHV3-73A0A0B4J1V6 119 aa10.61□□□□□ -0.71
SMG9-211ENST00000601170 IGHV3-30P01768 117 aa10.61□□□□□ -0.71
SMG9-211ENST00000601170 IGHV3-30-5P0DP03 117 aa10.61□□□□□ -0.71
SMG9-211ENST00000601170 MYO18BQ8IUG5 2567 aa10.61□□□□□ -0.71
SMG9-211ENST00000601170 SFTA2Q6UW10 78 aa10.61□□□□□ -0.71
SMG9-211ENST00000601170 IGLV4-3A0A075B6K6 122 aa10.6□□□□□ -0.71
SMG9-211ENST00000601170 TMEM223A0PJW6 202 aa10.6□□□□□ -0.71
SMG9-211ENST00000601170 NDUFA11Q86Y39 141 aa10.6□□□□□ -0.71
SMG9-211ENST00000601170 LOC107984156A0A0G2JMH3 177 aa10.6□□□□□ -0.71
SMG9-211ENST00000601170 RBMY1BA6NDE4 496 aaKnown RBP10.6□□□□□ -0.71
SMG9-211ENST00000601170 RBMY1EA6NEQ0 496 aaKnown RBP10.6□□□□□ -0.71
SMG9-211ENST00000601170 PRB1P04280 392 aa10.6□□□□□ -0.71
SMG9-211ENST00000601170 PRM2P04554 102 aa10.6□□□□□ -0.71
SMG9-211ENST00000601170 RBMY1DP0C7P1 496 aaKnown RBP10.6□□□□□ -0.71
SMG9-211ENST00000601170 ZNF22P17026 224 aaPredicted RBP10.6□□□□□ -0.71
SMG9-211ENST00000601170 PROK1P58294 105 aa10.6□□□□□ -0.71
SMG9-211ENST00000601170 ARL17AQ8IVW1 177 aa10.6□□□□□ -0.71
SMG9-211ENST00000601170 POLQO75417 2590 aa10.6□□□□□ -0.71
SMG9-211ENST00000601170 H3BMM0 161 aa10.59□□□□□ -0.71
SMG9-211ENST00000601170 DLX4Q92988 240 aaPredicted RBP10.59□□□□□ -0.71
SMG9-211ENST00000601170 VCX2Q9H322 139 aa10.59□□□□□ -0.71
SMG9-211ENST00000601170 IGHV3-64A0A075B6Q5 118 aa10.59□□□□□ -0.71
SMG9-211ENST00000601170 A0A0J9YXV3 536 aa10.59□□□□□ -0.71
SMG9-211ENST00000601170 RHODO00212 210 aa10.59□□□□□ -0.71
SMG9-211ENST00000601170 LEPROTO15243 131 aa10.59□□□□□ -0.71
SMG9-211ENST00000601170 DUX3Q96PT4 197 aa10.59□□□□□ -0.71
SMG9-211ENST00000601170 EDA2RQ9HAV5 297 aa10.59□□□□□ -0.71
SMG9-211ENST00000601170 ACACBO00763 2458 aa10.58□□□□□ -0.72
SMG9-211ENST00000601170 A8MTW9 85 aa10.58□□□□□ -0.72
SMG9-211ENST00000601170 J3QR89 54 aa10.58□□□□□ -0.72
SMG9-211ENST00000601170 CFC1BP0CG36 223 aa10.58□□□□□ -0.72
SMG9-211ENST00000601170 CFC1P0CG37 223 aa10.58□□□□□ -0.72
SMG9-211ENST00000601170 TMEM61Q8N0U2 210 aa10.58□□□□□ -0.72
SMG9-211ENST00000601170 UBE2D3P61077 147 aa10.58□□□□□ -0.72
SMG9-211ENST00000601170 UBE2D2P62837 147 aa10.58□□□□□ -0.72
SMG9-211ENST00000601170 SPAG8Q99932 426 aaPredicted RBP10.58□□□□□ -0.72
SMG9-211ENST00000601170 PSMB2P49721 201 aa10.57□□□□□ -0.72
SMG9-211ENST00000601170 KRTAP10-9P60411 292 aa10.57□□□□□ -0.72
SMG9-211ENST00000601170 Q5PR19 223 aa10.57□□□□□ -0.72
SMG9-211ENST00000601170 TSSC4Q9Y5U2 329 aaPredicted RBP10.57□□□□□ -0.72
SMG9-211ENST00000601170 CFAP126Q5VTH2 177 aa10.57□□□□□ -0.72
SMG9-211ENST00000601170 NACAE9PAV3 2078 aa10.56□□□□□ -0.72
SMG9-211ENST00000601170 M0R2P5 195 aa10.56□□□□□ -0.72
SMG9-211ENST00000601170 CD28P10747 220 aa10.56□□□□□ -0.72
SMG9-211ENST00000601170 KHDC1LQ5JSQ8 128 aa10.56□□□□□ -0.72
SMG9-211ENST00000601170 PEMTQ9UBM1 199 aa10.56□□□□□ -0.72
SMG9-211ENST00000601170 TNFRSF18Q9Y5U5 241 aa10.56□□□□□ -0.72
SMG9-211ENST00000601170 A8MWV9 139 aa10.55□□□□□ -0.72
SMG9-211ENST00000601170 Q8N2B8 174 aa10.55□□□□□ -0.72
SMG9-211ENST00000601170 C10orf126Q8N4M7 172 aa10.55□□□□□ -0.72
SMG9-211ENST00000601170 SMCPP49901 116 aaPredicted RBP10.55□□□□□ -0.72
SMG9-211ENST00000601170 INSL3P51460 131 aa10.55□□□□□ -0.72
SMG9-211ENST00000601170 ZNF415Q09FC8 603 aa10.55□□□□□ -0.72
SMG9-211ENST00000601170 CEMP1Q6PRD7 247 aaPredicted RBP10.55□□□□□ -0.72
SMG9-211ENST00000601170 FAM104AQ969W3 186 aa10.55□□□□□ -0.72
SMG9-211ENST00000601170 Q9UF83 564 aa10.55□□□□□ -0.72
SMG9-211ENST00000601170 PYGO1Q9Y3Y4 419 aa10.55□□□□□ -0.72
SMG9-211ENST00000601170 TRAV2A0A0B4J234 112 aa10.54□□□□□ -0.72
SMG9-211ENST00000601170 LYRM7Q5U5X0 104 aa10.54□□□□□ -0.72
SMG9-211ENST00000601170 MAP6D1Q9H9H5 199 aa10.54□□□□□ -0.72
SMG9-211ENST00000601170 HIST2H2BDQ6DRA6 164 aa10.54□□□□□ -0.72
SMG9-211ENST00000601170 C4orf3Q8WVX3 66 aa10.54□□□□□ -0.72
SMG9-211ENST00000601170 PRO1854Q9UHT4 67 aa10.54□□□□□ -0.72
SMG9-211ENST00000601170 CENPEQ02224 2701 aa10.54□□□□□ -0.72
SMG9-211ENST00000601170 FAM208BQ5VWN6 2430 aa10.54□□□□□ -0.72
SMG9-211ENST00000601170 CREBBPQ92793 2442 aa10.54□□□□□ -0.72
SMG9-211ENST00000601170 GAGE12HA6NDE8 117 aa10.53□□□□□ -0.72
SMG9-211ENST00000601170 Q6ZSN1 163 aa10.53□□□□□ -0.72
SMG9-211ENST00000601170 DYNLRB2Q8TF09 96 aa10.53□□□□□ -0.72
SMG9-211ENST00000601170 PRRC2AP48634 2157 aaKnown RBP10.53□□□□□ -0.72
SMG9-211ENST00000601170 A4D1N5 150 aa10.53□□□□□ -0.72
SMG9-211ENST00000601170 RNASE13Q5GAN3 156 aaKnown RBP10.53□□□□□ -0.72
SMG9-211ENST00000601170 ZNF418Q8TF45 676 aaPredicted RBP10.53□□□□□ -0.72
SMG9-211ENST00000601170 SPXQ9BT56 116 aa10.53□□□□□ -0.72
SMG9-211ENST00000601170 GTSF1LQ9H1H1 148 aa10.53□□□□□ -0.72
SMG9-211ENST00000601170 TCL1BO95988 128 aa10.52□□□□□ -0.73
SMG9-211ENST00000601170 MRPS36P82909 103 aaKnown RBP10.52□□□□□ -0.73
SMG9-211ENST00000601170 DEFB113Q30KQ7 82 aa10.52□□□□□ -0.73
SMG9-211ENST00000601170 LINC01587Q99440 93 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms