RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 SS18Q15532 418 aa7.32□□□□□ -1.24
NFKB1-212ENST00000600343 CACNA1EQ15878 2313 aa7.32□□□□□ -1.24
NFKB1-212ENST00000600343 FOLR3P41439 243 aa7.32□□□□□ -1.24
NFKB1-212ENST00000600343 VCYO14598 125 aa7.32□□□□□ -1.24
NFKB1-212ENST00000600343 BEAN1Q3B7T3 259 aa7.32□□□□□ -1.24
NFKB1-212ENST00000600343 C14orf132Q9NPU4 83 aa7.32□□□□□ -1.24
NFKB1-212ENST00000600343 CFAP54Q96N23 3096 aa7.32□□□□□ -1.24
NFKB1-212ENST00000600343 RBM3P98179 157 aaKnown RBP7.31□□□□□ -1.24
NFKB1-212ENST00000600343 IGHV1-69P01742 117 aa7.31□□□□□ -1.24
NFKB1-212ENST00000600343 LYPD5Q6UWN5 251 aa7.31□□□□□ -1.24
NFKB1-212ENST00000600343 ARHGAP32A7KAX9 2087 aa7.31□□□□□ -1.24
NFKB1-212ENST00000600343 VSIG2Q96IQ7 327 aa7.31□□□□□ -1.24
NFKB1-212ENST00000600343 PTPRZ1P23471 2315 aaPredicted RBP7.31□□□□□ -1.24
NFKB1-212ENST00000600343 IGHV5-10-1A0A0J9YXX1 117 aa7.3□□□□□ -1.24
NFKB1-212ENST00000600343 TIMM17BO60830 172 aa7.3□□□□□ -1.24
NFKB1-212ENST00000600343 TRBV12-3P01733 135 aa7.3□□□□□ -1.24
NFKB1-212ENST00000600343 HES7Q9BYE0 225 aa7.3□□□□□ -1.24
NFKB1-212ENST00000600343 WDR87Q6ZQQ6 2873 aa7.3□□□□□ -1.24
NFKB1-212ENST00000600343 BUB1B-PAK6H3BSN5 160 aa7.3□□□□□ -1.24
NFKB1-212ENST00000600343 RPL28P46779 137 aaKnown RBP7.3□□□□□ -1.24
NFKB1-212ENST00000600343 Q8N2B8 174 aa7.3□□□□□ -1.24
NFKB1-212ENST00000600343 Q9HAA7 133 aa7.3□□□□□ -1.24
NFKB1-212ENST00000600343 ROS1P08922 2347 aa7.3□□□□□ -1.24
NFKB1-212ENST00000600343 IGKV3-15P01624 115 aa7.3□□□□□ -1.24
NFKB1-212ENST00000600343 ZFAND3Q9H8U3 227 aa7.3□□□□□ -1.24
NFKB1-212ENST00000600343 IGHV3OR16-8A0A075B7F1 116 aa7.3□□□□□ -1.24
NFKB1-212ENST00000600343 TRBV7-6A0A0J9YX20 115 aa7.3□□□□□ -1.24
NFKB1-212ENST00000600343 POLR2KP53803 58 aaKnown RBP7.3□□□□□ -1.24
NFKB1-212ENST00000600343 Q0VFX4 171 aa7.3□□□□□ -1.24
NFKB1-212ENST00000600343 MALRD1Q5VYJ5 2156 aa7.29□□□□□ -1.24
NFKB1-212ENST00000600343 TTTY12Q9BZ98 90 aa7.29□□□□□ -1.24
NFKB1-212ENST00000600343 LAMA1P25391 3075 aa7.29□□□□□ -1.24
NFKB1-212ENST00000600343 RAI1Q7Z5J4 1906 aaPredicted RBP7.28□□□□□ -1.24
NFKB1-212ENST00000600343 CCKP06307 115 aa7.28□□□□□ -1.24
NFKB1-212ENST00000600343 FAM218AQ96MZ4 157 aa7.28□□□□□ -1.24
NFKB1-212ENST00000600343 TRBV27A0A0K0K1C4 114 aa7.28□□□□□ -1.24
NFKB1-212ENST00000600343 WFDC9Q8NEX5 89 aa7.28□□□□□ -1.24
NFKB1-212ENST00000600343 IGHV1-58A0A0C4DH39 117 aa7.28□□□□□ -1.24
NFKB1-212ENST00000600343 F5H697 171 aa7.28□□□□□ -1.24
NFKB1-212ENST00000600343 IGHV3-23P01764 117 aa7.27□□□□□ -1.25
NFKB1-212ENST00000600343 MSMPQ1L6U9 139 aa7.27□□□□□ -1.25
NFKB1-212ENST00000600343 SPTA1P02549 2419 aa7.27□□□□□ -1.25
NFKB1-212ENST00000600343 A8MZ25 164 aa7.27□□□□□ -1.25
NFKB1-212ENST00000600343 MPLKIPQ8TAP9 179 aa7.27□□□□□ -1.25
NFKB1-212ENST00000600343 IGHV4OR15-8A0A075B7B6 117 aa7.26□□□□□ -1.25
NFKB1-212ENST00000600343 A0A087WW49 117 aa7.26□□□□□ -1.25
NFKB1-212ENST00000600343 HOXD3P31249 432 aaPredicted RBP7.26□□□□□ -1.25
NFKB1-212ENST00000600343 PRR9Q5T870 116 aa7.26□□□□□ -1.25
NFKB1-212ENST00000600343 F8WEM9 126 aa7.26□□□□□ -1.25
NFKB1-212ENST00000600343 SNRPD3P62318 126 aaKnown RBP7.26□□□□□ -1.25
NFKB1-212ENST00000600343 IGHV1-18A0A0C4DH31 117 aa7.26□□□□□ -1.25
NFKB1-212ENST00000600343 IGHV3-35A0A0C4DH35 117 aa7.26□□□□□ -1.25
NFKB1-212ENST00000600343 SUMO4Q6EEV6 95 aa7.26□□□□□ -1.25
NFKB1-212ENST00000600343 CNEP1R1Q8N9A8 125 aa7.26□□□□□ -1.25
NFKB1-212ENST00000600343 Q96MF0 132 aa7.26□□□□□ -1.25
NFKB1-212ENST00000600343 ZDBF2Q9HCK1 2354 aa7.26□□□□□ -1.25
NFKB1-212ENST00000600343 FREM2Q5SZK8 3169 aa7.25□□□□□ -1.25
NFKB1-212ENST00000600343 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.25□□□□□ -1.25
NFKB1-212ENST00000600343 C9orf47Q6ZRZ4 202 aa7.25□□□□□ -1.25
NFKB1-212ENST00000600343 SNURFQ9Y675 71 aa7.25□□□□□ -1.25
NFKB1-212ENST00000600343 TMEM89A2RUT3 159 aa7.25□□□□□ -1.25
NFKB1-212ENST00000600343 C9orf129Q5T035 196 aaKnown RBP7.25□□□□□ -1.25
NFKB1-212ENST00000600343 CADP27708 2225 aa7.25□□□□□ -1.25
NFKB1-212ENST00000600343 IGLV4-3A0A075B6K6 122 aa7.24□□□□□ -1.25
NFKB1-212ENST00000600343 IGHV3-66A0A0C4DH42 116 aa7.24□□□□□ -1.25
NFKB1-212ENST00000600343 APRG1Q8IVJ8 170 aa7.24□□□□□ -1.25
NFKB1-212ENST00000600343 POLEQ07864 2286 aa7.24□□□□□ -1.25
NFKB1-212ENST00000600343 SOCS3O14543 225 aa7.24□□□□□ -1.25
NFKB1-212ENST00000600343 IGFL2Q6UWQ7 119 aa7.24□□□□□ -1.25
NFKB1-212ENST00000600343 RMI2Q96E14 147 aa7.24□□□□□ -1.25
NFKB1-212ENST00000600343 LPAL2Q16609 132 aa7.24□□□□□ -1.25
NFKB1-212ENST00000600343 S100A7L2Q5SY68 101 aa7.24□□□□□ -1.25
NFKB1-212ENST00000600343 ENHOQ6UWT2 76 aa7.24□□□□□ -1.25
NFKB1-212ENST00000600343 LINC00308Q8TCZ7 52 aa7.24□□□□□ -1.25
NFKB1-212ENST00000600343 KLKP1Q107X0 134 aa7.24□□□□□ -1.25
NFKB1-212ENST00000600343 VMO1Q7Z5L0 202 aa7.24□□□□□ -1.25
NFKB1-212ENST00000600343 AKAP6Q13023 2319 aa7.23□□□□□ -1.25
NFKB1-212ENST00000600343 TRAV7A0A075B6U4 112 aa7.23□□□□□ -1.25
NFKB1-212ENST00000600343 A0A087WWL8 130 aa7.23□□□□□ -1.25
NFKB1-212ENST00000600343 TRAV21A0A0B4J279 112 aa7.23□□□□□ -1.25
NFKB1-212ENST00000600343 RPL11P62913 178 aaKnown RBP7.23□□□□□ -1.25
NFKB1-212ENST00000600343 CD164Q04900 197 aa7.23□□□□□ -1.25
NFKB1-212ENST00000600343 ATP5EP2Q5VTU8 51 aa7.23□□□□□ -1.25
NFKB1-212ENST00000600343 DEFB127Q9H1M4 99 aa7.23□□□□□ -1.25
NFKB1-212ENST00000600343 TRIOO75962 3097 aa7.23□□□□□ -1.25
NFKB1-212ENST00000600343 CACNA1GO43497 2377 aa7.23□□□□□ -1.25
NFKB1-212ENST00000600343 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.23□□□□□ -1.25
NFKB1-212ENST00000600343 C5orf67F2Z3F1 127 aa7.23□□□□□ -1.25
NFKB1-212ENST00000600343 F8W735 103 aaPredicted RBP7.23□□□□□ -1.25
NFKB1-212ENST00000600343 MOB4Q9Y3A3 225 aa7.23□□□□□ -1.25
NFKB1-212ENST00000600343 IGF1P05019 195 aa7.23□□□□□ -1.25
NFKB1-212ENST00000600343 CD28P10747 220 aa7.23□□□□□ -1.25
NFKB1-212ENST00000600343 LINC00315P59091 139 aa7.23□□□□□ -1.25
NFKB1-212ENST00000600343 SOSTDC1Q6X4U4 206 aa7.23□□□□□ -1.25
NFKB1-212ENST00000600343 BPESC1Q9GZL8 116 aa7.23□□□□□ -1.25
NFKB1-212ENST00000600343 IGHV3OR16-13A0A075B7E8 117 aa7.22□□□□□ -1.25
NFKB1-212ENST00000600343 IGHV3-74A0A0B4J1X5 117 aa7.22□□□□□ -1.25
NFKB1-212ENST00000600343 IGHV1-3A0A0C4DH29 117 aa7.22□□□□□ -1.25
NFKB1-212ENST00000600343 GNRH2O43555 120 aa7.22□□□□□ -1.25
NFKB1-212ENST00000600343 C20orf203Q8NBC4 194 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms