RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 MED9Q9NWA0 146 aa11.2□□□□□ -0.62
SMG9-210ENST00000600097 KRBOX1C9JBD0 128 aa11.19□□□□□ -0.62
SMG9-210ENST00000600097 RPL36AP83881 106 aaKnown RBP11.19□□□□□ -0.62
SMG9-210ENST00000600097 RPL36ALQ969Q0 106 aaKnown RBP11.19□□□□□ -0.62
SMG9-210ENST00000600097 SFRP2Q96HF1 295 aa11.19□□□□□ -0.62
SMG9-210ENST00000600097 PHLDA3Q9Y5J5 127 aa11.19□□□□□ -0.62
SMG9-210ENST00000600097 SH2D1AO60880 128 aa11.18□□□□□ -0.62
SMG9-210ENST00000600097 CRIP1P50238 77 aa11.18□□□□□ -0.62
SMG9-210ENST00000600097 SMIM12Q96EX1 92 aa11.18□□□□□ -0.62
SMG9-210ENST00000600097 DERL1Q9BUN8 251 aa11.18□□□□□ -0.62
SMG9-210ENST00000600097 MLST8Q9BVC4 326 aa11.18□□□□□ -0.62
SMG9-210ENST00000600097 C1orf43Q9BWL3 253 aa11.18□□□□□ -0.62
SMG9-210ENST00000600097 PLA2G2DQ9UNK4 145 aa11.18□□□□□ -0.62
SMG9-210ENST00000600097 A0A087WWL8 130 aa11.17□□□□□ -0.62
SMG9-210ENST00000600097 M0R036 132 aa11.17□□□□□ -0.62
SMG9-210ENST00000600097 GNG4P50150 75 aa11.17□□□□□ -0.62
SMG9-210ENST00000600097 EIF5A2Q9GZV4 153 aaKnown RBP11.17□□□□□ -0.62
SMG9-210ENST00000600097 LRP1Q07954 4544 aaKnown RBP11.16□□□□□ -0.62
SMG9-210ENST00000600097 TRBV7-3A0A075B6L6 115 aa11.16□□□□□ -0.62
SMG9-210ENST00000600097 GRIFINA4D1Z8 144 aa11.16□□□□□ -0.62
SMG9-210ENST00000600097 TMEM250H0YL14 139 aa11.16□□□□□ -0.62
SMG9-210ENST00000600097 UBE2D3P61077 147 aa11.16□□□□□ -0.62
SMG9-210ENST00000600097 UBE2D2P62837 147 aa11.16□□□□□ -0.62
SMG9-210ENST00000600097 LINC01559Q495D7 138 aa11.16□□□□□ -0.62
SMG9-210ENST00000600097 CENPWQ5EE01 88 aa11.16□□□□□ -0.62
SMG9-210ENST00000600097 BIN3Q9NQY0 253 aa11.16□□□□□ -0.62
SMG9-210ENST00000600097 TMEM262E9PQX1 116 aa11.15□□□□□ -0.62
SMG9-210ENST00000600097 M0R381 172 aa11.15□□□□□ -0.62
SMG9-210ENST00000600097 NDUFS6O75380 124 aaKnown RBP11.15□□□□□ -0.62
SMG9-210ENST00000600097 CRPP02741 224 aa11.15□□□□□ -0.62
SMG9-210ENST00000600097 RPL37AP61513 92 aaKnown RBP11.15□□□□□ -0.62
SMG9-210ENST00000600097 ZFP82Q8N141 532 aa11.15□□□□□ -0.62
SMG9-210ENST00000600097 DAZAP1Q96EP5 407 aaKnown RBP11.15□□□□□ -0.62
SMG9-210ENST00000600097 FAM210AQ96ND0 272 aa11.15□□□□□ -0.62
SMG9-210ENST00000600097 HMCN2Q8NDA2 5059 aa11.14□□□□□ -0.63
SMG9-210ENST00000600097 TRBV6-8A0A0A6YYG3 113 aa11.14□□□□□ -0.63
SMG9-210ENST00000600097 RAB19A4D1S5 217 aa11.14□□□□□ -0.63
SMG9-210ENST00000600097 PRR27Q6MZM9 219 aa11.14□□□□□ -0.63
SMG9-210ENST00000600097 ENHOQ6UWT2 76 aa11.14□□□□□ -0.63
SMG9-210ENST00000600097 OR10G8Q8NGN5 311 aa11.14□□□□□ -0.63
SMG9-210ENST00000600097 PKIAP61925 76 aa11.12□□□□□ -0.63
SMG9-210ENST00000600097 DGAT2L7PQ6IED9 249 aa11.12□□□□□ -0.63
SMG9-210ENST00000600097 C15orf54Q8N8G6 183 aa11.12□□□□□ -0.63
SMG9-210ENST00000600097 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.12□□□□□ -0.63
SMG9-210ENST00000600097 TMSB15BA0A087X1C1 80 aa11.11□□□□□ -0.63
SMG9-210ENST00000600097 USP17L23D6RBM5 183 aa11.11□□□□□ -0.63
SMG9-210ENST00000600097 ANGP03950 147 aaKnown RBP11.11□□□□□ -0.63
SMG9-210ENST00000600097 CXCL1P09341 107 aa11.11□□□□□ -0.63
SMG9-210ENST00000600097 MIAQ16674 131 aa11.11□□□□□ -0.63
SMG9-210ENST00000600097 TRBV20OR9-2A0A075B6H5 130 aa11.1□□□□□ -0.63
SMG9-210ENST00000600097 RAB4BP61018 213 aa11.1□□□□□ -0.63
SMG9-210ENST00000600097 RAB14P61106 215 aa11.1□□□□□ -0.63
SMG9-210ENST00000600097 MPV17L2Q567V2 206 aa11.1□□□□□ -0.63
SMG9-210ENST00000600097 HLA-DQA1P01909 254 aa11.09□□□□□ -0.63
SMG9-210ENST00000600097 CEBPGP53567 150 aa11.09□□□□□ -0.63
SMG9-210ENST00000600097 RPS20P60866 119 aaKnown RBP11.09□□□□□ -0.63
SMG9-210ENST00000600097 C9orf163Q8N9P6 203 aa11.09□□□□□ -0.63
SMG9-210ENST00000600097 NEXN-AS1Q8NBZ9 246 aa11.09□□□□□ -0.63
SMG9-210ENST00000600097 CHCHD5Q9BSY4 110 aa11.09□□□□□ -0.63
SMG9-210ENST00000600097 SMDT1Q9H4I9 107 aa11.09□□□□□ -0.63
SMG9-210ENST00000600097 XKRY2A2RUG3 117 aa11.08□□□□□ -0.64
SMG9-210ENST00000600097 C19orf71A6NCJ1 209 aa11.08□□□□□ -0.64
SMG9-210ENST00000600097 P01737 135 aa11.08□□□□□ -0.64
SMG9-210ENST00000600097 PRSS1P07477 247 aa11.08□□□□□ -0.64
SMG9-210ENST00000600097 PEA15Q15121 130 aa11.08□□□□□ -0.64
SMG9-210ENST00000600097 ZNF56Q15929 161 aa11.08□□□□□ -0.64
SMG9-210ENST00000600097 TMEM97Q5BJF2 176 aa11.08□□□□□ -0.64
SMG9-210ENST00000600097 OCC1Q8TAD7 63 aa11.08□□□□□ -0.64
SMG9-210ENST00000600097 SRP19P09132 144 aaKnown RBP11.07□□□□□ -0.64
SMG9-210ENST00000600097 HNRNPA3P51991 378 aaKnown RBP11.07□□□□□ -0.64
SMG9-210ENST00000600097 RPL19P84098 196 aaKnown RBP11.07□□□□□ -0.64
SMG9-210ENST00000600097 SMIM7Q9BQ49 75 aa11.07□□□□□ -0.64
SMG9-210ENST00000600097 FAT3Q8TDW7 4589 aa11.06□□□□□ -0.64
SMG9-210ENST00000600097 ZNF727A8MUV8 499 aa11.06□□□□□ -0.64
SMG9-210ENST00000600097 OR2D3Q8NGH3 330 aa11.06□□□□□ -0.64
SMG9-210ENST00000600097 PRR34Q9NV39 138 aa11.06□□□□□ -0.64
SMG9-210ENST00000600097 OR5AL1P0C617 328 aa11.05□□□□□ -0.64
SMG9-210ENST00000600097 FAM74A3Q4VXF1 159 aa11.05□□□□□ -0.64
SMG9-210ENST00000600097 OR10AG1Q8NH19 301 aa11.05□□□□□ -0.64
SMG9-210ENST00000600097 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.05□□□□□ -0.64
SMG9-210ENST00000600097 UBR4Q5T4S7 5183 aa11.05□□□□□ -0.64
SMG9-210ENST00000600097 SNAI2O43623 268 aa11.04□□□□□ -0.64
SMG9-210ENST00000600097 CLRN3Q8NCR9 226 aa11.04□□□□□ -0.64
SMG9-210ENST00000600097 NUDT10Q8NFP7 164 aa11.04□□□□□ -0.64
SMG9-210ENST00000600097 NUDT11Q96G61 164 aa11.04□□□□□ -0.64
SMG9-210ENST00000600097 SSBP4Q9BWG4 385 aaPredicted RBP11.04□□□□□ -0.64
SMG9-210ENST00000600097 F5H697 171 aa11.03□□□□□ -0.64
SMG9-210ENST00000600097 K7EN84 100 aa11.03□□□□□ -0.64
SMG9-210ENST00000600097 SPANXN1Q5VSR9 72 aa11.03□□□□□ -0.64
SMG9-210ENST00000600097 SDIM1Q6ZPB5 146 aa11.03□□□□□ -0.64
SMG9-210ENST00000600097 F2Z2F3 143 aa11.02□□□□□ -0.65
SMG9-210ENST00000600097 RBX1P62877 108 aa11.02□□□□□ -0.65
SMG9-210ENST00000600097 KRTAP26-1Q6PEX3 210 aa11.02□□□□□ -0.65
SMG9-210ENST00000600097 Q6ZRU5 148 aa11.02□□□□□ -0.65
SMG9-210ENST00000600097 NTM-AS1Q6ZSK4 140 aa11.02□□□□□ -0.65
SMG9-210ENST00000600097 FAM231DQ6ZW35 169 aa11.02□□□□□ -0.65
SMG9-210ENST00000600097 LINC00269Q8N2A0 174 aa11.02□□□□□ -0.65
SMG9-210ENST00000600097 FER1L6-AS1Q8NA97 138 aa11.02□□□□□ -0.65
SMG9-210ENST00000600097 RNASE7Q9H1E1 156 aaKnown RBP11.02□□□□□ -0.65
SMG9-210ENST00000600097 RPP21Q9H633 154 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms