RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 SEC61GP60059 68 aa9.05□□□□□ -0.96
SCN8A-208ENST00000599343 SPTSSBQ8NFR3 76 aa9.05□□□□□ -0.96
SCN8A-208ENST00000599343 LOXL1Q08397 574 aaPredicted RBP9.05□□□□□ -0.96
SCN8A-208ENST00000599343 COX7BP24311 80 aa9.05□□□□□ -0.96
SCN8A-208ENST00000599343 NDUFA11Q86Y39 141 aa9.05□□□□□ -0.96
SCN8A-208ENST00000599343 UNQ9165/PRO28630Q6UXU0 137 aa9.04□□□□□ -0.96
SCN8A-208ENST00000599343 PIP4P1Q86T03 277 aa9.04□□□□□ -0.96
SCN8A-208ENST00000599343 UPK3BQ9BT76 320 aa9.04□□□□□ -0.96
SCN8A-208ENST00000599343 C10orf105Q8TEF2 133 aa9.04□□□□□ -0.96
SCN8A-208ENST00000599343 SIRPDQ9H106 197 aa9.04□□□□□ -0.96
SCN8A-208ENST00000599343 Q8N7P7 452 aa9.04□□□□□ -0.96
SCN8A-208ENST00000599343 FRMPD3Q5JV73 1810 aa9.04□□□□□ -0.96
SCN8A-208ENST00000599343 MED14OSP0DP75 135 aa9.03□□□□□ -0.96
SCN8A-208ENST00000599343 ODF3L1Q8IXM7 274 aa9.03□□□□□ -0.96
SCN8A-208ENST00000599343 MPLKIPQ8TAP9 179 aa9.03□□□□□ -0.96
SCN8A-208ENST00000599343 GTF3C1Q12789 2109 aa9.03□□□□□ -0.96
SCN8A-208ENST00000599343 IGLV2-14P01704 120 aa9.03□□□□□ -0.96
SCN8A-208ENST00000599343 PLA2G5P39877 138 aa9.03□□□□□ -0.96
SCN8A-208ENST00000599343 RNF138Q8WVD3 245 aa9.03□□□□□ -0.96
SCN8A-208ENST00000599343 NACAE9PAV3 2078 aa9.03□□□□□ -0.96
SCN8A-208ENST00000599343 IGKV2-24A0A0C4DH68 120 aa9.03□□□□□ -0.96
SCN8A-208ENST00000599343 C20orf203Q8NBC4 194 aa9.03□□□□□ -0.96
SCN8A-208ENST00000599343 TP53TG3Q9ULZ0 132 aa9.03□□□□□ -0.96
SCN8A-208ENST00000599343 K7EMT4 169 aa9.02□□□□□ -0.96
SCN8A-208ENST00000599343 C4orf3Q8WVX3 66 aa9.02□□□□□ -0.96
SCN8A-208ENST00000599343 MIAQ16674 131 aa9.02□□□□□ -0.97
SCN8A-208ENST00000599343 SPATA12Q7Z6I5 190 aa9.02□□□□□ -0.97
SCN8A-208ENST00000599343 SCXQ7RTU7 201 aa9.02□□□□□ -0.97
SCN8A-208ENST00000599343 ADORA2A-AS1P86434 159 aa9.01□□□□□ -0.97
SCN8A-208ENST00000599343 GPHB5Q86YW7 130 aa9.01□□□□□ -0.97
SCN8A-208ENST00000599343 A0A096LNI7 61 aa9.01□□□□□ -0.97
SCN8A-208ENST00000599343 SDIM1Q6ZPB5 146 aa9.01□□□□□ -0.97
SCN8A-208ENST00000599343 B9D2Q9BPU9 175 aa9.01□□□□□ -0.97
SCN8A-208ENST00000599343 TRBV6-1A0A0K0K1D8 114 aa9□□□□□ -0.97
SCN8A-208ENST00000599343 C19orf71A6NCJ1 209 aa9□□□□□ -0.97
SCN8A-208ENST00000599343 TMEM263Q8WUH6 116 aaKnown RBP9□□□□□ -0.97
SCN8A-208ENST00000599343 BPY2O14599 106 aa9□□□□□ -0.97
SCN8A-208ENST00000599343 ZNF80P51504 273 aaPredicted RBP9□□□□□ -0.97
SCN8A-208ENST00000599343 A0A0J9YXY3 114 aa9□□□□□ -0.97
SCN8A-208ENST00000599343 TNRC6AQ8NDV7 1962 aaKnown RBP9□□□□□ -0.97
SCN8A-208ENST00000599343 A0A0J9YX75 114 aa9□□□□□ -0.97
SCN8A-208ENST00000599343 HIGD2AQ9BW72 106 aa9□□□□□ -0.97
SCN8A-208ENST00000599343 LINC00643Q86TS7 51 aa8.99□□□□□ -0.97
SCN8A-208ENST00000599343 SLPIP03973 132 aa8.99□□□□□ -0.97
SCN8A-208ENST00000599343 TEX49A0A1B0GTD5 131 aa8.99□□□□□ -0.97
SCN8A-208ENST00000599343 LINC00269Q8N2A0 174 aa8.99□□□□□ -0.97
SCN8A-208ENST00000599343 MAP6D1Q9H9H5 199 aa8.99□□□□□ -0.97
SCN8A-208ENST00000599343 MT-ATP8P03928 68 aa8.99□□□□□ -0.97
SCN8A-208ENST00000599343 MYCNOSP40205 109 aa8.99□□□□□ -0.97
SCN8A-208ENST00000599343 IGFL2Q6UWQ7 119 aa8.99□□□□□ -0.97
SCN8A-208ENST00000599343 NLRC5Q86WI3 1866 aa8.99□□□□□ -0.97
SCN8A-208ENST00000599343 PLCE1Q9P212 2302 aa8.99□□□□□ -0.97
SCN8A-208ENST00000599343 IGLV1-47P01700 117 aa8.99□□□□□ -0.97
SCN8A-208ENST00000599343 Q6ZSR3 168 aa8.99□□□□□ -0.97
SCN8A-208ENST00000599343 PRO0255Q9UI72 69 aa8.98□□□□□ -0.97
SCN8A-208ENST00000599343 C20orf197Q8N268 126 aa8.98□□□□□ -0.97
SCN8A-208ENST00000599343 TP73-AS1Q9UF72 201 aa8.98□□□□□ -0.97
SCN8A-208ENST00000599343 LYPD6Q86Y78 171 aa8.98□□□□□ -0.97
SCN8A-208ENST00000599343 MED13Q9UHV7 2174 aa8.98□□□□□ -0.97
SCN8A-208ENST00000599343 LINC00322Q6ZN03 302 aaPredicted RBP8.98□□□□□ -0.97
SCN8A-208ENST00000599343 MLST8Q9BVC4 326 aa8.98□□□□□ -0.97
SCN8A-208ENST00000599343 FAM208BQ5VWN6 2430 aa8.97□□□□□ -0.97
SCN8A-208ENST00000599343 ZFAND2AQ8N6M9 145 aa8.97□□□□□ -0.97
SCN8A-208ENST00000599343 SMAD5-AS1Q9Y6J3 95 aa8.97□□□□□ -0.97
SCN8A-208ENST00000599343 Q6ZTI0 123 aa8.97□□□□□ -0.97
SCN8A-208ENST00000599343 CASC2Q6XLA1 102 aa8.97□□□□□ -0.97
SCN8A-208ENST00000599343 PTPRQQ9UMZ3 2332 aa8.97□□□□□ -0.97
SCN8A-208ENST00000599343 ZGRF1Q86YA3 2104 aa8.96□□□□□ -0.97
SCN8A-208ENST00000599343 HIST2H2BDQ6DRA6 164 aa8.96□□□□□ -0.97
SCN8A-208ENST00000599343 IGKV1D-37A0A075B6S9 117 aa8.96□□□□□ -0.97
SCN8A-208ENST00000599343 IGLC6P0CF74 106 aa8.96□□□□□ -0.97
SCN8A-208ENST00000599343 GDF5OSQ5U4N7 250 aa8.96□□□□□ -0.97
SCN8A-208ENST00000599343 KLK5Q9Y337 293 aaPredicted RBP8.96□□□□□ -0.97
SCN8A-208ENST00000599343 LRCOL1A6NCL2 159 aa8.96□□□□□ -0.98
SCN8A-208ENST00000599343 PDE6GP18545 87 aa8.96□□□□□ -0.98
SCN8A-208ENST00000599343 NDUFV3P56181 108 aaKnown RBP8.96□□□□□ -0.98
SCN8A-208ENST00000599343 REG3AQ06141 175 aa8.96□□□□□ -0.98
SCN8A-208ENST00000599343 ENHOQ6UWT2 76 aa8.96□□□□□ -0.98
SCN8A-208ENST00000599343 CCDC140Q96MF4 163 aa8.96□□□□□ -0.98
SCN8A-208ENST00000599343 LINC00467Q9BRT7 94 aa8.96□□□□□ -0.98
SCN8A-208ENST00000599343 A0A0U1RQV1 116 aa8.95□□□□□ -0.98
SCN8A-208ENST00000599343 LINC01548A6NM66 108 aa8.95□□□□□ -0.98
SCN8A-208ENST00000599343 A0A1B0GXF2 115 aa8.95□□□□□ -0.98
SCN8A-208ENST00000599343 BDP1A6H8Y1 2624 aa8.94□□□□□ -0.98
SCN8A-208ENST00000599343 MSMPQ1L6U9 139 aa8.94□□□□□ -0.98
SCN8A-208ENST00000599343 UFSP1Q6NVU6 142 aa8.94□□□□□ -0.98
SCN8A-208ENST00000599343 FAM19A1Q7Z5A9 133 aa8.94□□□□□ -0.98
SCN8A-208ENST00000599343 A6NDX4 124 aa8.94□□□□□ -0.98
SCN8A-208ENST00000599343 IGLV2-8P01709 118 aa8.94□□□□□ -0.98
SCN8A-208ENST00000599343 TRBV10-1A0A0K0K1A3 114 aa8.93□□□□□ -0.98
SCN8A-208ENST00000599343 FAM236DA0A1B0GTK5 79 aa8.93□□□□□ -0.98
SCN8A-208ENST00000599343 USP17L23D6RBM5 183 aa8.93□□□□□ -0.98
SCN8A-208ENST00000599343 FAM236CP0DP71 79 aa8.93□□□□□ -0.98
SCN8A-208ENST00000599343 WFDC10BQ8IUB3 73 aa8.93□□□□□ -0.98
SCN8A-208ENST00000599343 CHCHD10Q8WYQ3 142 aaPredicted RBP8.93□□□□□ -0.98
SCN8A-208ENST00000599343 MGAMO43451 1857 aa8.93□□□□□ -0.98
SCN8A-208ENST00000599343 C11orf1Q9H5F2 150 aa8.93□□□□□ -0.98
SCN8A-208ENST00000599343 ARHGAP21Q5T5U3 1957 aa8.93□□□□□ -0.98
SCN8A-208ENST00000599343 TMEM89A2RUT3 159 aa8.93□□□□□ -0.98
SCN8A-208ENST00000599343 DNAJC9-AS1A6NH13 148 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms