RNA–Protein interactions for RNA: ENST00000598867.1

SOX2-OT-230, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 348 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-230ENST00000598867 CST11Q9H112 138 aa2.74□□□□□ -1.97
SOX2-OT-230ENST00000598867 CMC2Q9NRP2 79 aa2.74□□□□□ -1.97
SOX2-OT-230ENST00000598867 ERGIC3Q9Y282 383 aa2.74□□□□□ -1.97
SOX2-OT-230ENST00000598867 V9GYS6 101 aa2.74□□□□□ -1.97
SOX2-OT-230ENST00000598867 DNAH2Q9P225 4427 aa2.73□□□□□ -1.97
SOX2-OT-230ENST00000598867 IGLV10-54A0A075B6I4 117 aa2.73□□□□□ -1.97
SOX2-OT-230ENST00000598867 IGKV2-24A0A0C4DH68 120 aa2.73□□□□□ -1.97
SOX2-OT-230ENST00000598867 ZNF736B4DX44 427 aaPredicted RBP2.73□□□□□ -1.97
SOX2-OT-230ENST00000598867 ZNF73O43830 326 aaPredicted RBP2.73□□□□□ -1.97
SOX2-OT-230ENST00000598867 LYRM7Q5U5X0 104 aa2.73□□□□□ -1.97
SOX2-OT-230ENST00000598867 BPIFA4PQ86YQ2 179 aa2.73□□□□□ -1.97
SOX2-OT-230ENST00000598867 ZNF439Q8NDP4 499 aa2.73□□□□□ -1.97
SOX2-OT-230ENST00000598867 TERB2Q8NHR7 220 aa2.73□□□□□ -1.97
SOX2-OT-230ENST00000598867 DNAJC9Q8WXX5 260 aa2.73□□□□□ -1.97
SOX2-OT-230ENST00000598867 PKD1P98161 4303 aa2.72□□□□□ -1.97
SOX2-OT-230ENST00000598867 DYNC1H1Q14204 4646 aaKnown RBP2.72□□□□□ -1.97
SOX2-OT-230ENST00000598867 DNAH11Q96DT5 4516 aa2.72□□□□□ -1.97
SOX2-OT-230ENST00000598867 A0A0G2JND7 137 aa2.72□□□□□ -1.97
SOX2-OT-230ENST00000598867 LOC105371267A0A1B0GV96 52 aa2.72□□□□□ -1.97
SOX2-OT-230ENST00000598867 SDCBPO00560 298 aaPredicted RBP2.72□□□□□ -1.97
SOX2-OT-230ENST00000598867 IFNA4P05014 189 aa2.72□□□□□ -1.97
SOX2-OT-230ENST00000598867 RNASE2P10153 161 aaKnown RBP2.72□□□□□ -1.97
SOX2-OT-230ENST00000598867 S100A4P26447 101 aaKnown RBP2.72□□□□□ -1.97
SOX2-OT-230ENST00000598867 RBP2P50120 134 aa2.72□□□□□ -1.97
SOX2-OT-230ENST00000598867 PLGLAQ15195 96 aa2.72□□□□□ -1.97
SOX2-OT-230ENST00000598867 DEFB135Q30KP9 77 aa2.72□□□□□ -1.97
SOX2-OT-230ENST00000598867 UNQ5815/PRO19632Q6UWF5 114 aa2.72□□□□□ -1.97
SOX2-OT-230ENST00000598867 CLVS1Q8IUQ0 354 aaPredicted RBP2.72□□□□□ -1.97
SOX2-OT-230ENST00000598867 LINC00311Q8N616 119 aa2.72□□□□□ -1.97
SOX2-OT-230ENST00000598867 DYDC1Q8WWB3 177 aa2.72□□□□□ -1.97
SOX2-OT-230ENST00000598867 PYDC1Q8WXC3 89 aa2.72□□□□□ -1.97
SOX2-OT-230ENST00000598867 PP6455Q8WZ26 134 aa2.72□□□□□ -1.97
SOX2-OT-230ENST00000598867 YIPF3Q9GZM5 350 aa2.72□□□□□ -1.97
SOX2-OT-230ENST00000598867 IMUPQ9GZP8 106 aa2.72□□□□□ -1.97
SOX2-OT-230ENST00000598867 SLC39A9Q9NUM3 307 aa2.72□□□□□ -1.97
SOX2-OT-230ENST00000598867 OR52A1Q9UKL2 312 aa2.72□□□□□ -1.97
SOX2-OT-230ENST00000598867 TIMM9Q9Y5J7 89 aa2.72□□□□□ -1.97
SOX2-OT-230ENST00000598867 R4GMQ9 66 aa2.72□□□□□ -1.97
SOX2-OT-230ENST00000598867 DNAH17Q9UFH2 4485 aa2.72□□□□□ -1.97
SOX2-OT-230ENST00000598867 TRAV7A0A075B6U4 112 aa2.71□□□□□ -1.98
SOX2-OT-230ENST00000598867 SPRR5A0A1B0GTR4 108 aa2.71□□□□□ -1.98
SOX2-OT-230ENST00000598867 LOC107986453A0A1B0GWG9 222 aa2.71□□□□□ -1.98
SOX2-OT-230ENST00000598867 MAP1LC3B2A6NCE7 125 aa2.71□□□□□ -1.98
SOX2-OT-230ENST00000598867 C1orf196B1AJZ1 125 aa2.71□□□□□ -1.98
SOX2-OT-230ENST00000598867 H3BUA1 57 aa2.71□□□□□ -1.98
SOX2-OT-230ENST00000598867 DEGS1O15121 323 aa2.71□□□□□ -1.98
SOX2-OT-230ENST00000598867 NDUFA3O95167 84 aa2.71□□□□□ -1.98
SOX2-OT-230ENST00000598867 PPBPP02775 128 aa2.71□□□□□ -1.98
SOX2-OT-230ENST00000598867 NBEAP1P0C6P0 100 aa2.71□□□□□ -1.98
SOX2-OT-230ENST00000598867 DEFA4P12838 97 aa2.71□□□□□ -1.98
SOX2-OT-230ENST00000598867 ZNF137PP52743 207 aa2.71□□□□□ -1.98
SOX2-OT-230ENST00000598867 LINC01554Q52M75 96 aa2.71□□□□□ -1.98
SOX2-OT-230ENST00000598867 TMEM78Q5T7P6 136 aa2.71□□□□□ -1.98
SOX2-OT-230ENST00000598867 LYZL1Q6UWQ5 148 aa2.71□□□□□ -1.98
SOX2-OT-230ENST00000598867 FAM24BQ8N5W8 94 aa2.71□□□□□ -1.98
SOX2-OT-230ENST00000598867 LINC00304Q8N9R0 145 aa2.71□□□□□ -1.98
SOX2-OT-230ENST00000598867 Q8NDZ9 215 aa2.71□□□□□ -1.98
SOX2-OT-230ENST00000598867 ARL11Q969Q4 196 aa2.71□□□□□ -1.98
SOX2-OT-230ENST00000598867 TVP23CQ96ET8 276 aa2.71□□□□□ -1.98
SOX2-OT-230ENST00000598867 FAM103A1Q9BTL3 118 aaKnown RBP2.71□□□□□ -1.98
SOX2-OT-230ENST00000598867 TMEM70Q9BUB7 260 aa2.71□□□□□ -1.98
SOX2-OT-230ENST00000598867 MAP1LC3BQ9GZQ8 125 aa2.71□□□□□ -1.98
SOX2-OT-230ENST00000598867 PRO0461Q9UI25 63 aa2.71□□□□□ -1.98
SOX2-OT-230ENST00000598867 HHLA3Q9XRX5 114 aa2.71□□□□□ -1.98
SOX2-OT-230ENST00000598867 SRRM2Q9UQ35 2752 aaKnown RBP2.71□□□□□ -1.98
SOX2-OT-230ENST00000598867 IGKV1-9A0A0C4DH69 117 aa2.7□□□□□ -1.98
SOX2-OT-230ENST00000598867 TMEM30CPA0ZSE6 113 aa2.7□□□□□ -1.98
SOX2-OT-230ENST00000598867 SLC22A1O15245 554 aa2.7□□□□□ -1.98
SOX2-OT-230ENST00000598867 ORC5O43913 435 aa2.7□□□□□ -1.98
SOX2-OT-230ENST00000598867 SUPT4H1P63272 117 aaKnown RBP2.7□□□□□ -1.98
SOX2-OT-230ENST00000598867 DEFA5Q01523 94 aa2.7□□□□□ -1.98
SOX2-OT-230ENST00000598867 CDK5R1Q15078 307 aa2.7□□□□□ -1.98
SOX2-OT-230ENST00000598867 MIR17HGQ75NE6 70 aa2.7□□□□□ -1.98
SOX2-OT-230ENST00000598867 KTN1-AS1Q86SY8 53 aa2.7□□□□□ -1.98
SOX2-OT-230ENST00000598867 GRPEL2Q8TAA5 225 aa2.7□□□□□ -1.98
SOX2-OT-230ENST00000598867 SCGB3A1Q96QR1 104 aa2.7□□□□□ -1.98
SOX2-OT-230ENST00000598867 SAR1AQ9NR31 198 aa2.7□□□□□ -1.98
SOX2-OT-230ENST00000598867 PSORS1C2Q9UIG4 136 aa2.7□□□□□ -1.98
SOX2-OT-230ENST00000598867 APLNQ9ULZ1 77 aa2.7□□□□□ -1.98
SOX2-OT-230ENST00000598867 NUBP2Q9Y5Y2 271 aa2.7□□□□□ -1.98
SOX2-OT-230ENST00000598867 UBR4Q5T4S7 5183 aa2.69□□□□□ -1.98
SOX2-OT-230ENST00000598867 C2orf70A6NJV1 201 aa2.69□□□□□ -1.98
SOX2-OT-230ENST00000598867 ZNF670-ZNF695F2Z2N8 137 aa2.69□□□□□ -1.98
SOX2-OT-230ENST00000598867 H7C2G1 150 aa2.69□□□□□ -1.98
SOX2-OT-230ENST00000598867 M0R2N4 97 aa2.69□□□□□ -1.98
SOX2-OT-230ENST00000598867 CYB5BO43169 146 aa2.69□□□□□ -1.98
SOX2-OT-230ENST00000598867 EDF1O60869 148 aaKnown RBP2.69□□□□□ -1.98
SOX2-OT-230ENST00000598867 IGKV1-16P04430 117 aa2.69□□□□□ -1.98
SOX2-OT-230ENST00000598867 EIF2B2P49770 351 aaKnown RBP2.69□□□□□ -1.98
SOX2-OT-230ENST00000598867 RRN3P1Q2M238 152 aa2.69□□□□□ -1.98
SOX2-OT-230ENST00000598867 DEFB114Q30KQ6 69 aa2.69□□□□□ -1.98
SOX2-OT-230ENST00000598867 SCGB2B2Q4G0G5 96 aa2.69□□□□□ -1.98
SOX2-OT-230ENST00000598867 ADAT3Q96EY9 351 aaPredicted RBP2.69□□□□□ -1.98
SOX2-OT-230ENST00000598867 FLG2Q5D862 2391 aaPredicted RBP2.69□□□□□ -1.98
SOX2-OT-230ENST00000598867 TSTD3H0UI37 97 aa2.68□□□□□ -1.98
SOX2-OT-230ENST00000598867 HMGN1P05114 100 aa2.68□□□□□ -1.98
SOX2-OT-230ENST00000598867 P0DMU3 169 aa2.68□□□□□ -1.98
SOX2-OT-230ENST00000598867 FAM231AP0DMU4 169 aa2.68□□□□□ -1.98
SOX2-OT-230ENST00000598867 FAM231CP0DMU5 169 aa2.68□□□□□ -1.98
SOX2-OT-230ENST00000598867 COX4I1P13073 169 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms