RNA–Protein interactions for RNA: ENST00000598553.1

VRK3-214, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 595 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-214ENST00000598553 S100A4P26447 101 aaKnown RBP7.13□□□□□ -1.27
VRK3-214ENST00000598553 ASIPP42127 132 aa7.13□□□□□ -1.27
VRK3-214ENST00000598553 RPL19P84098 196 aaKnown RBP7.13□□□□□ -1.27
VRK3-214ENST00000598553 GAGE1Q13065 139 aa7.13□□□□□ -1.27
VRK3-214ENST00000598553 GAGE4Q13068 117 aa7.13□□□□□ -1.27
VRK3-214ENST00000598553 GAGE5Q13069 117 aa7.13□□□□□ -1.27
VRK3-214ENST00000598553 GAGE13Q4V321 117 aa7.13□□□□□ -1.27
VRK3-214ENST00000598553 LINC01556Q5JQF7 62 aa7.13□□□□□ -1.27
VRK3-214ENST00000598553 PIK3CD-AS1Q5SR53 167 aa7.13□□□□□ -1.27
VRK3-214ENST00000598553 DNLZQ5SXM8 178 aa7.13□□□□□ -1.27
VRK3-214ENST00000598553 CDPF1Q6NVV7 123 aa7.13□□□□□ -1.27
VRK3-214ENST00000598553 COX8CQ7Z4L0 72 aa7.13□□□□□ -1.27
VRK3-214ENST00000598553 C11orf52Q96A22 123 aa7.13□□□□□ -1.27
VRK3-214ENST00000598553 FMC1Q96HJ9 113 aa7.13□□□□□ -1.27
VRK3-214ENST00000598553 Q9HAA7 133 aa7.13□□□□□ -1.27
VRK3-214ENST00000598553 SCRT2Q9NQ03 307 aa7.13□□□□□ -1.27
VRK3-214ENST00000598553 PGPEP1Q9NXJ5 209 aa7.13□□□□□ -1.27
VRK3-214ENST00000598553 A8MWV9 139 aa7.12□□□□□ -1.27
VRK3-214ENST00000598553 HIST1H2BKO60814 126 aa7.12□□□□□ -1.27
VRK3-214ENST00000598553 HIST1H2BJP06899 126 aa7.12□□□□□ -1.27
VRK3-214ENST00000598553 ARMS2P0C7Q2 107 aa7.12□□□□□ -1.27
VRK3-214ENST00000598553 TRGC1P0CF51 173 aa7.12□□□□□ -1.27
VRK3-214ENST00000598553 HIST1H2BOP23527 126 aa7.12□□□□□ -1.27
VRK3-214ENST00000598553 HIST1H2BBP33778 126 aa7.12□□□□□ -1.27
VRK3-214ENST00000598553 HIST1H2BDP58876 126 aa7.12□□□□□ -1.27
VRK3-214ENST00000598553 HIST1H2BCP62807 126 aa7.12□□□□□ -1.27
VRK3-214ENST00000598553 HIST2H2BEQ16778 126 aa7.12□□□□□ -1.27
VRK3-214ENST00000598553 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.12□□□□□ -1.27
VRK3-214ENST00000598553 ZFP2Q6ZN57 461 aa7.12□□□□□ -1.27
VRK3-214ENST00000598553 LINC01551Q86U37 167 aa7.12□□□□□ -1.27
VRK3-214ENST00000598553 HIST1H2BHQ93079 126 aa7.12□□□□□ -1.27
VRK3-214ENST00000598553 HIST1H2BNQ99877 126 aa7.12□□□□□ -1.27
VRK3-214ENST00000598553 HIST1H2BMQ99879 126 aa7.12□□□□□ -1.27
VRK3-214ENST00000598553 IL36BQ9NZH7 164 aa7.12□□□□□ -1.27
VRK3-214ENST00000598553 ZFP30Q9Y2G7 519 aa7.12□□□□□ -1.27
VRK3-214ENST00000598553 A0A087WWL8 130 aa7.11□□□□□ -1.27
VRK3-214ENST00000598553 TRAV8-6A0A0B4J262 113 aa7.11□□□□□ -1.27
VRK3-214ENST00000598553 TRBV6-1A0A0K0K1D8 114 aa7.11□□□□□ -1.27
VRK3-214ENST00000598553 PCP4L1A6NKN8 68 aa7.11□□□□□ -1.27
VRK3-214ENST00000598553 LTAP01374 205 aa7.11□□□□□ -1.27
VRK3-214ENST00000598553 UBE2G1P62253 170 aa7.11□□□□□ -1.27
VRK3-214ENST00000598553 OR10J3Q5JRS4 329 aa7.11□□□□□ -1.27
VRK3-214ENST00000598553 FAM162BQ5T6X4 162 aa7.11□□□□□ -1.27
VRK3-214ENST00000598553 LELP1Q5T871 98 aa7.11□□□□□ -1.27
VRK3-214ENST00000598553 ATP6V0E2Q8NHE4 81 aa7.11□□□□□ -1.27
VRK3-214ENST00000598553 GTSF1LQ9H1H1 148 aa7.11□□□□□ -1.27
VRK3-214ENST00000598553 IBA57-AS1B1ANH7 110 aa7.1□□□□□ -1.27
VRK3-214ENST00000598553 LINC01559Q495D7 138 aa7.1□□□□□ -1.27
VRK3-214ENST00000598553 FAM74A4Q5TZK3 123 aa7.1□□□□□ -1.27
VRK3-214ENST00000598553 DAZ4Q86SG3 579 aaKnown RBP7.1□□□□□ -1.27
VRK3-214ENST00000598553 FRZBQ92765 325 aa7.1□□□□□ -1.27
VRK3-214ENST00000598553 SFRP2Q96HF1 295 aa7.1□□□□□ -1.27
VRK3-214ENST00000598553 DAZ3Q9NR90 486 aaKnown RBP7.1□□□□□ -1.27
VRK3-214ENST00000598553 MUC21A0A0G2JKD1 596 aa7.09□□□□□ -1.27
VRK3-214ENST00000598553 MUC21A0A140T8X8 626 aa7.09□□□□□ -1.27
VRK3-214ENST00000598553 M0R381 172 aa7.09□□□□□ -1.27
VRK3-214ENST00000598553 RHODO00212 210 aa7.09□□□□□ -1.27
VRK3-214ENST00000598553 PHOX2AO14813 284 aa7.09□□□□□ -1.27
VRK3-214ENST00000598553 COA6Q5JTJ3 125 aaKnown RBP7.09□□□□□ -1.27
VRK3-214ENST00000598553 HIST3H2BBQ8N257 126 aa7.09□□□□□ -1.27
VRK3-214ENST00000598553 SYT8Q8NBV8 401 aa7.09□□□□□ -1.27
VRK3-214ENST00000598553 OR10G8Q8NGN5 311 aa7.09□□□□□ -1.27
VRK3-214ENST00000598553 DERL1Q9BUN8 251 aa7.09□□□□□ -1.27
VRK3-214ENST00000598553 NIT2Q9NQR4 276 aa7.09□□□□□ -1.27
VRK3-214ENST00000598553 PSCAO43653 123 aa7.08□□□□□ -1.28
VRK3-214ENST00000598553 LAGE3Q14657 143 aa7.08□□□□□ -1.28
VRK3-214ENST00000598553 COX19Q49B96 90 aa7.08□□□□□ -1.28
VRK3-214ENST00000598553 OR10AG1Q8NH19 301 aa7.08□□□□□ -1.28
VRK3-214ENST00000598553 FAM30AQ9NZY2 134 aa7.08□□□□□ -1.28
VRK3-214ENST00000598553 FAT1Q14517 4588 aa7.08□□□□□ -1.28
VRK3-214ENST00000598553 LECT2O14960 151 aa7.07□□□□□ -1.28
VRK3-214ENST00000598553 SMR3BP02814 79 aaPredicted RBP7.07□□□□□ -1.28
VRK3-214ENST00000598553 GNG4P50150 75 aa7.07□□□□□ -1.28
VRK3-214ENST00000598553 OCC1Q8TAD7 63 aa7.07□□□□□ -1.28
VRK3-214ENST00000598553 MLST8Q9BVC4 326 aa7.07□□□□□ -1.28
VRK3-214ENST00000598553 PHLDA3Q9Y5J5 127 aa7.07□□□□□ -1.28
VRK3-214ENST00000598553 IGLV2-8P01709 118 aa7.06□□□□□ -1.28
VRK3-214ENST00000598553 Q8N814 137 aa7.06□□□□□ -1.28
VRK3-214ENST00000598553 OR10D4PQ8NGN7 298 aa7.06□□□□□ -1.28
VRK3-214ENST00000598553 OSTCQ9NRP0 149 aa7.06□□□□□ -1.28
VRK3-214ENST00000598553 DNAH8Q96JB1 4490 aa7.05□□□□□ -1.28
VRK3-214ENST00000598553 IGLV5-52A0A0A0MRZ9 124 aa7.05□□□□□ -1.28
VRK3-214ENST00000598553 XKRY2A2RUG3 117 aa7.05□□□□□ -1.28
VRK3-214ENST00000598553 IFITM10A6NMD0 228 aa7.05□□□□□ -1.28
VRK3-214ENST00000598553 GZMBP10144 247 aa7.05□□□□□ -1.28
VRK3-214ENST00000598553 GCSHP23434 173 aa7.05□□□□□ -1.28
VRK3-214ENST00000598553 SSTP61278 116 aa7.05□□□□□ -1.28
VRK3-214ENST00000598553 LINC01620Q4KN68 170 aa7.05□□□□□ -1.28
VRK3-214ENST00000598553 Q5VSD8 79 aa7.05□□□□□ -1.28
VRK3-214ENST00000598553 PRR27Q6MZM9 219 aa7.05□□□□□ -1.28
VRK3-214ENST00000598553 NTN5Q8WTR8 489 aaPredicted RBP7.05□□□□□ -1.28
VRK3-214ENST00000598553 TRAPPC1Q9Y5R8 145 aa7.05□□□□□ -1.28
VRK3-214ENST00000598553 VPS13BQ7Z7G8 4022 aa7.05□□□□□ -1.28
VRK3-214ENST00000598553 TRBV20OR9-2A0A075B6H5 130 aa7.04□□□□□ -1.28
VRK3-214ENST00000598553 SNAI2O43623 268 aa7.04□□□□□ -1.28
VRK3-214ENST00000598553 MT-ND6P03923 174 aa7.04□□□□□ -1.28
VRK3-214ENST00000598553 FABP4P15090 132 aa7.04□□□□□ -1.28
VRK3-214ENST00000598553 UBE2D3P61077 147 aa7.04□□□□□ -1.28
VRK3-214ENST00000598553 UBE2D2P62837 147 aa7.04□□□□□ -1.28
VRK3-214ENST00000598553 CENPWQ5EE01 88 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms