RNA–Protein interactions for RNA: ENST00000598478.1

LINC00343-206, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 618 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-206ENST00000598478 OR7C2O60412 319 aa4.39□□□□□ -1.71
LINC00343-206ENST00000598478 GCGP01275 180 aa4.39□□□□□ -1.71
LINC00343-206ENST00000598478 P01737 135 aa4.39□□□□□ -1.71
LINC00343-206ENST00000598478 FGF7P21781 194 aa4.39□□□□□ -1.71
LINC00343-206ENST00000598478 S100A4P26447 101 aaKnown RBP4.39□□□□□ -1.71
LINC00343-206ENST00000598478 RPL13AP40429 203 aaKnown RBP4.39□□□□□ -1.71
LINC00343-206ENST00000598478 PKIAP61925 76 aa4.39□□□□□ -1.71
LINC00343-206ENST00000598478 GNG5P63218 68 aa4.39□□□□□ -1.71
LINC00343-206ENST00000598478 MRPS10P82664 201 aaKnown RBP4.39□□□□□ -1.71
LINC00343-206ENST00000598478 PRR27Q6MZM9 219 aa4.39□□□□□ -1.71
LINC00343-206ENST00000598478 PHF5AQ7RTV0 110 aaKnown RBP4.39□□□□□ -1.71
LINC00343-206ENST00000598478 C20orf203Q8NBC4 194 aa4.39□□□□□ -1.71
LINC00343-206ENST00000598478 LINC00526Q96FQ7 95 aa4.39□□□□□ -1.71
LINC00343-206ENST00000598478 IGKV3D-20A0A0C4DH25 116 aa4.38□□□□□ -1.71
LINC00343-206ENST00000598478 H3BVH4 76 aa4.38□□□□□ -1.71
LINC00343-206ENST00000598478 EIF3GO75821 320 aaKnown RBP eCLIP4.38□□□□□ -1.71
LINC00343-206ENST00000598478 GZMBP10144 247 aa4.38□□□□□ -1.71
LINC00343-206ENST00000598478 BCAP31P51572 246 aa4.38□□□□□ -1.71
LINC00343-206ENST00000598478 RAB2AP61019 212 aa4.38□□□□□ -1.71
LINC00343-206ENST00000598478 UBE2L3P68036 154 aaKnown RBP4.38□□□□□ -1.71
LINC00343-206ENST00000598478 CTF1Q16619 201 aa4.38□□□□□ -1.71
LINC00343-206ENST00000598478 TPRXLQ17RH7 258 aa4.38□□□□□ -1.71
LINC00343-206ENST00000598478 CFAP161Q6P656 301 aa4.38□□□□□ -1.71
LINC00343-206ENST00000598478 KRTAP11-1Q8IUC1 163 aa4.38□□□□□ -1.71
LINC00343-206ENST00000598478 NEXN-AS1Q8NBZ9 246 aa4.38□□□□□ -1.71
LINC00343-206ENST00000598478 OR10G8Q8NGN5 311 aa4.38□□□□□ -1.71
LINC00343-206ENST00000598478 CMTM2Q8TAZ6 248 aa4.38□□□□□ -1.71
LINC00343-206ENST00000598478 GSKIPQ9P0R6 139 aa4.38□□□□□ -1.71
LINC00343-206ENST00000598478 CTDSP2O14595 271 aa4.37□□□□□ -1.71
LINC00343-206ENST00000598478 RGS5O15539 181 aa4.37□□□□□ -1.71
LINC00343-206ENST00000598478 GAGE2BQ13066 116 aa4.37□□□□□ -1.71
LINC00343-206ENST00000598478 IL18Q14116 193 aa4.37□□□□□ -1.71
LINC00343-206ENST00000598478 IAH1Q2TAA2 248 aaPredicted RBP4.37□□□□□ -1.71
LINC00343-206ENST00000598478 SPANXN2Q5MJ10 180 aa4.37□□□□□ -1.71
LINC00343-206ENST00000598478 MCFD2Q8NI22 146 aa4.37□□□□□ -1.71
LINC00343-206ENST00000598478 SFRP2Q96HF1 295 aa4.37□□□□□ -1.71
LINC00343-206ENST00000598478 DERL1Q9BUN8 251 aa4.37□□□□□ -1.71
LINC00343-206ENST00000598478 NPCDR1Q9BY65 106 aa4.37□□□□□ -1.71
LINC00343-206ENST00000598478 OTORQ9NRC9 128 aa4.37□□□□□ -1.71
LINC00343-206ENST00000598478 OR5AC2Q9NZP5 309 aa4.37□□□□□ -1.71
LINC00343-206ENST00000598478 USH2AO75445 5202 aa4.37□□□□□ -1.71
LINC00343-206ENST00000598478 GVQW2A0A096LPI5 108 aaPredicted RBP4.36□□□□□ -1.71
LINC00343-206ENST00000598478 IGKV3OR2-268A0A0C4DH90 116 aa4.36□□□□□ -1.71
LINC00343-206ENST00000598478 C9orf170A2RU37 121 aa4.36□□□□□ -1.71
LINC00343-206ENST00000598478 L7N2F9 121 aa4.36□□□□□ -1.71
LINC00343-206ENST00000598478 VAMP2P63027 116 aa4.36□□□□□ -1.71
LINC00343-206ENST00000598478 EIF5AP63241 154 aaKnown RBP4.36□□□□□ -1.71
LINC00343-206ENST00000598478 OR11H4Q8NGC9 324 aa4.36□□□□□ -1.71
LINC00343-206ENST00000598478 THAP6Q8TBB0 222 aa4.36□□□□□ -1.71
LINC00343-206ENST00000598478 MITD1Q8WV92 249 aa4.36□□□□□ -1.71
LINC00343-206ENST00000598478 AP3S1Q92572 193 aa4.36□□□□□ -1.71
LINC00343-206ENST00000598478 NDFIP1Q9BT67 221 aa4.36□□□□□ -1.71
LINC00343-206ENST00000598478 FUNDC2Q9BWH2 189 aa4.36□□□□□ -1.71
LINC00343-206ENST00000598478 IL36BQ9NZH7 164 aa4.36□□□□□ -1.71
LINC00343-206ENST00000598478 PHLDA3Q9Y5J5 127 aa4.36□□□□□ -1.71
LINC00343-206ENST00000598478 IGLV7-46A0A075B6I9 117 aa4.35□□□□□ -1.71
LINC00343-206ENST00000598478 TRBV25-1A0A075B6N4 114 aa4.35□□□□□ -1.71
LINC00343-206ENST00000598478 A0A087WXM4 84 aa4.35□□□□□ -1.71
LINC00343-206ENST00000598478 TRBV6-1A0A0K0K1D8 114 aa4.35□□□□□ -1.71
LINC00343-206ENST00000598478 GRIFINA4D1Z8 144 aa4.35□□□□□ -1.71
LINC00343-206ENST00000598478 M0R381 172 aa4.35□□□□□ -1.71
LINC00343-206ENST00000598478 ARMS2P0C7Q2 107 aa4.35□□□□□ -1.71
LINC00343-206ENST00000598478 MT1HP80294 61 aa4.35□□□□□ -1.71
LINC00343-206ENST00000598478 C9orf116Q5BN46 136 aaPredicted RBP4.35□□□□□ -1.71
LINC00343-206ENST00000598478 CARD19Q96LW7 228 aa4.35□□□□□ -1.71
LINC00343-206ENST00000598478 LYRM2Q9NU23 88 aaPredicted RBP4.35□□□□□ -1.71
LINC00343-206ENST00000598478 MBD2Q9UBB5 411 aa4.35□□□□□ -1.71
LINC00343-206ENST00000598478 LSM5Q9Y4Y9 91 aaKnown RBP4.35□□□□□ -1.71
LINC00343-206ENST00000598478 FCGBPQ9Y6R7 5405 aaPredicted RBP4.35□□□□□ -1.71
LINC00343-206ENST00000598478 A0A087WZ39 114 aa4.34□□□□□ -1.71
LINC00343-206ENST00000598478 IGSF23A1L1A6 192 aa4.34□□□□□ -1.71
LINC00343-206ENST00000598478 S100A11P31949 105 aa4.34□□□□□ -1.71
LINC00343-206ENST00000598478 SULT1A2P50226 295 aa4.34□□□□□ -1.71
LINC00343-206ENST00000598478 ZNF56Q15929 161 aa4.34□□□□□ -1.71
LINC00343-206ENST00000598478 IQCJQ1A5X6 159 aa4.34□□□□□ -1.71
LINC00343-206ENST00000598478 SMUG1Q53HV7 270 aa4.34□□□□□ -1.71
LINC00343-206ENST00000598478 SDHCQ99643 169 aaPredicted RBP4.34□□□□□ -1.71
LINC00343-206ENST00000598478 RPP21Q9H633 154 aaKnown RBP4.34□□□□□ -1.71
LINC00343-206ENST00000598478 PSG8Q9UQ74 426 aa4.34□□□□□ -1.71
LINC00343-206ENST00000598478 IGHV1-24A0A0C4DH33 117 aa4.33□□□□□ -1.72
LINC00343-206ENST00000598478 B4DEV8 164 aa4.33□□□□□ -1.72
LINC00343-206ENST00000598478 M0R036 132 aa4.33□□□□□ -1.72
LINC00343-206ENST00000598478 SULT1A1P50225 295 aa4.33□□□□□ -1.72
LINC00343-206ENST00000598478 RAB4BP61018 213 aa4.33□□□□□ -1.72
LINC00343-206ENST00000598478 ZFP69Q49AA0 526 aa4.33□□□□□ -1.72
LINC00343-206ENST00000598478 FAM74A1Q5RGS3 127 aa4.33□□□□□ -1.72
LINC00343-206ENST00000598478 PRNTQ86SH4 94 aa4.33□□□□□ -1.72
LINC00343-206ENST00000598478 SMIM29Q86T20 159 aa4.33□□□□□ -1.72
LINC00343-206ENST00000598478 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.33□□□□□ -1.72
LINC00343-206ENST00000598478 AQP10Q96PS8 301 aa4.33□□□□□ -1.72
LINC00343-206ENST00000598478 NAA50Q9GZZ1 169 aaKnown RBP4.33□□□□□ -1.72
LINC00343-206ENST00000598478 C11orf1Q9H5F2 150 aa4.33□□□□□ -1.72
LINC00343-206ENST00000598478 VCX3AQ9NNX9 186 aa4.33□□□□□ -1.72
LINC00343-206ENST00000598478 CARHSP1Q9Y2V2 147 aaKnown RBP4.33□□□□□ -1.72
LINC00343-206ENST00000598478 SYNE2Q8WXH0 6885 aaKnown RBP4.32□□□□□ -1.72
LINC00343-206ENST00000598478 A0A087X002 238 aa4.32□□□□□ -1.72
LINC00343-206ENST00000598478 CFC1BP0CG36 223 aa4.32□□□□□ -1.72
LINC00343-206ENST00000598478 BCL2P10415 239 aa4.32□□□□□ -1.72
LINC00343-206ENST00000598478 ASB16-AS1Q495Z4 193 aa4.32□□□□□ -1.72
LINC00343-206ENST00000598478 TMEM97Q5BJF2 176 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms