RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 DERL1Q9BUN8 251 aa11.22□□□□□ -0.61
PNKP-210ENST00000597965 BAALCQ8WXS3 180 aa11.21□□□□□ -0.61
PNKP-210ENST00000597965 LINC00479Q96M42 142 aa11.21□□□□□ -0.61
PNKP-210ENST00000597965 A0A087WX48 190 aa11.2□□□□□ -0.62
PNKP-210ENST00000597965 C14orf177Q52M58 125 aa11.2□□□□□ -0.62
PNKP-210ENST00000597965 SCXQ7RTU7 201 aa11.2□□□□□ -0.62
PNKP-210ENST00000597965 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.2□□□□□ -0.62
PNKP-210ENST00000597965 TCEAL7Q9BRU2 100 aa11.2□□□□□ -0.62
PNKP-210ENST00000597965 CHAC1Q9BUX1 264 aa11.2□□□□□ -0.62
PNKP-210ENST00000597965 TRBV20OR9-2A0A075B6H5 130 aa11.19□□□□□ -0.62
PNKP-210ENST00000597965 IGKV2D-24A0A075B6R9 120 aa11.19□□□□□ -0.62
PNKP-210ENST00000597965 IGKV3D-20A0A0C4DH25 116 aa11.19□□□□□ -0.62
PNKP-210ENST00000597965 Q0VG73 95 aa11.19□□□□□ -0.62
PNKP-210ENST00000597965 Q8N3U1 123 aa11.19□□□□□ -0.62
PNKP-210ENST00000597965 COLCA2A8K830 154 aa11.18□□□□□ -0.62
PNKP-210ENST00000597965 OXTP01178 125 aa11.18□□□□□ -0.62
PNKP-210ENST00000597965 RPL35P42766 123 aaKnown RBP11.18□□□□□ -0.62
PNKP-210ENST00000597965 ADIRFQ15847 76 aa11.18□□□□□ -0.62
PNKP-210ENST00000597965 UFSP1Q6NVU6 142 aa11.18□□□□□ -0.62
PNKP-210ENST00000597965 LINC01551Q86U37 167 aa11.18□□□□□ -0.62
PNKP-210ENST00000597965 NIT1Q86X76 327 aa11.18□□□□□ -0.62
PNKP-210ENST00000597965 CTDSP1Q9GZU7 261 aa11.18□□□□□ -0.62
PNKP-210ENST00000597965 PEX7O00628 323 aa11.17□□□□□ -0.62
PNKP-210ENST00000597965 DNLZQ5SXM8 178 aa11.17□□□□□ -0.62
PNKP-210ENST00000597965 C14orf178Q8N769 122 aaPredicted RBP11.17□□□□□ -0.62
PNKP-210ENST00000597965 OCC1Q8TAD7 63 aa11.17□□□□□ -0.62
PNKP-210ENST00000597965 HIST1H2BAQ96A08 127 aa11.17□□□□□ -0.62
PNKP-210ENST00000597965 YPEL4Q96NS1 127 aa11.17□□□□□ -0.62
PNKP-210ENST00000597965 SAMD10Q9BYL1 202 aa11.17□□□□□ -0.62
PNKP-210ENST00000597965 TMEM242Q9NWH2 141 aa11.17□□□□□ -0.62
PNKP-210ENST00000597965 KLK12Q9UKR0 248 aa11.17□□□□□ -0.62
PNKP-210ENST00000597965 PHLDA3Q9Y5J5 127 aa11.17□□□□□ -0.62
PNKP-210ENST00000597965 DNAH8Q96JB1 4490 aa11.17□□□□□ -0.62
PNKP-210ENST00000597965 TRBV10-1A0A0K0K1A3 114 aa11.16□□□□□ -0.62
PNKP-210ENST00000597965 H3BVH4 76 aa11.16□□□□□ -0.62
PNKP-210ENST00000597965 MT-ND4LP03901 98 aa11.16□□□□□ -0.62
PNKP-210ENST00000597965 FAM74A4Q5TZK3 123 aa11.16□□□□□ -0.62
PNKP-210ENST00000597965 DMRTA1Q5VZB9 504 aa11.16□□□□□ -0.62
PNKP-210ENST00000597965 C15orf54Q8N8G6 183 aa11.16□□□□□ -0.62
PNKP-210ENST00000597965 ISOC2Q96AB3 205 aa11.16□□□□□ -0.62
PNKP-210ENST00000597965 UBE2WQ96B02 151 aa11.16□□□□□ -0.62
PNKP-210ENST00000597965 ZFP30Q9Y2G7 519 aa11.16□□□□□ -0.62
PNKP-210ENST00000597965 RPL36AP83881 106 aaKnown RBP11.15□□□□□ -0.62
PNKP-210ENST00000597965 RPL36ALQ969Q0 106 aaKnown RBP11.15□□□□□ -0.62
PNKP-210ENST00000597965 TRAV34A0A0B4J273 112 aa11.14□□□□□ -0.63
PNKP-210ENST00000597965 IGLV2-8P01709 118 aa11.14□□□□□ -0.63
PNKP-210ENST00000597965 ARMS2P0C7Q2 107 aa11.14□□□□□ -0.63
PNKP-210ENST00000597965 LINC01620Q4KN68 170 aa11.14□□□□□ -0.63
PNKP-210ENST00000597965 CENPWQ5EE01 88 aa11.14□□□□□ -0.63
PNKP-210ENST00000597965 FAM162BQ5T6X4 162 aa11.14□□□□□ -0.63
PNKP-210ENST00000597965 ANAPC16Q96DE5 110 aa11.14□□□□□ -0.63
PNKP-210ENST00000597965 SFRP2Q96HF1 295 aa11.14□□□□□ -0.63
PNKP-210ENST00000597965 JPT2Q9H910 190 aa11.14□□□□□ -0.63
PNKP-210ENST00000597965 K7EN84 100 aa11.13□□□□□ -0.63
PNKP-210ENST00000597965 S100A9P06702 114 aaKnown RBP11.13□□□□□ -0.63
PNKP-210ENST00000597965 GNG4P50150 75 aa11.13□□□□□ -0.63
PNKP-210ENST00000597965 PKIAP61925 76 aa11.13□□□□□ -0.63
PNKP-210ENST00000597965 Q86TA4 180 aa11.13□□□□□ -0.63
PNKP-210ENST00000597965 ZFP82Q8N141 532 aa11.13□□□□□ -0.63
PNKP-210ENST00000597965 CIRBP-AS1Q8TBR5 109 aa11.13□□□□□ -0.63
PNKP-210ENST00000597965 C1orf43Q9BWL3 253 aa11.13□□□□□ -0.63
PNKP-210ENST00000597965 TRBV7-3A0A075B6L6 115 aa11.12□□□□□ -0.63
PNKP-210ENST00000597965 CRPP02741 224 aa11.12□□□□□ -0.63
PNKP-210ENST00000597965 COX8CQ7Z4L0 72 aa11.12□□□□□ -0.63
PNKP-210ENST00000597965 FMC1Q96HJ9 113 aa11.12□□□□□ -0.63
PNKP-210ENST00000597965 Q9UF83 564 aa11.12□□□□□ -0.63
PNKP-210ENST00000597965 TMA7Q9Y2S6 64 aaKnown RBP11.12□□□□□ -0.63
PNKP-210ENST00000597965 TRBV6-1A0A0K0K1D8 114 aa11.11□□□□□ -0.63
PNKP-210ENST00000597965 TMEM262E9PQX1 116 aa11.11□□□□□ -0.63
PNKP-210ENST00000597965 M0R381 172 aa11.11□□□□□ -0.63
PNKP-210ENST00000597965 PPP1R2P9O14990 202 aa11.11□□□□□ -0.63
PNKP-210ENST00000597965 UBE2G1P62253 170 aa11.11□□□□□ -0.63
PNKP-210ENST00000597965 A0A087WWL8 130 aa11.1□□□□□ -0.63
PNKP-210ENST00000597965 BAGE2Q86Y30 109 aa11.1□□□□□ -0.63
PNKP-210ENST00000597965 OR10G8Q8NGN5 311 aa11.1□□□□□ -0.63
PNKP-210ENST00000597965 ZC2HC1AQ96GY0 325 aa11.1□□□□□ -0.63
PNKP-210ENST00000597965 SH2D1AO60880 128 aa11.09□□□□□ -0.63
PNKP-210ENST00000597965 UBE2D3P61077 147 aa11.09□□□□□ -0.63
PNKP-210ENST00000597965 UBE2D2P62837 147 aa11.09□□□□□ -0.63
PNKP-210ENST00000597965 LINC01559Q495D7 138 aa11.09□□□□□ -0.63
PNKP-210ENST00000597965 TRBV6-8A0A0A6YYG3 113 aa11.08□□□□□ -0.64
PNKP-210ENST00000597965 GRIFINA4D1Z8 144 aa11.08□□□□□ -0.64
PNKP-210ENST00000597965 CXCL1P09341 107 aa11.08□□□□□ -0.64
PNKP-210ENST00000597965 RAB5AP20339 215 aa11.08□□□□□ -0.64
PNKP-210ENST00000597965 CRIP1P50238 77 aa11.08□□□□□ -0.64
PNKP-210ENST00000597965 RAB4BP61018 213 aa11.08□□□□□ -0.64
PNKP-210ENST00000597965 SMIM12Q96EX1 92 aa11.08□□□□□ -0.64
PNKP-210ENST00000597965 MLST8Q9BVC4 326 aa11.08□□□□□ -0.64
PNKP-210ENST00000597965 OSTCQ9NRP0 149 aa11.08□□□□□ -0.64
PNKP-210ENST00000597965 TGIF2-C20orf24A0A0A6YYL0 155 aa11.07□□□□□ -0.64
PNKP-210ENST00000597965 LTAP01374 205 aa11.07□□□□□ -0.64
PNKP-210ENST00000597965 KRTAP10-4P60372 401 aaPredicted RBP11.07□□□□□ -0.64
PNKP-210ENST00000597965 MIAQ16674 131 aa11.07□□□□□ -0.64
PNKP-210ENST00000597965 TMEM97Q5BJF2 176 aa11.07□□□□□ -0.64
PNKP-210ENST00000597965 DGAT2L7PQ6IED9 249 aa11.07□□□□□ -0.64
PNKP-210ENST00000597965 DNAJC30Q96LL9 226 aa11.07□□□□□ -0.64
PNKP-210ENST00000597965 IMMP2LQ96T52 175 aa11.07□□□□□ -0.64
PNKP-210ENST00000597965 PLA2G2DQ9UNK4 145 aa11.07□□□□□ -0.64
PNKP-210ENST00000597965 TRBV24-1A0A075B6N3 115 aa11.06□□□□□ -0.64
PNKP-210ENST00000597965 ANGP03950 147 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms