RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 XGP55808 180 aa6.99□□□□□ -1.29
CCDC9-203ENST00000596938 SSTP61278 116 aa6.99□□□□□ -1.29
CCDC9-203ENST00000596938 CACNG7P62955 275 aa6.99□□□□□ -1.29
CCDC9-203ENST00000596938 BLOC1S1P78537 153 aa6.99□□□□□ -1.29
CCDC9-203ENST00000596938 ELOBQ15370 118 aa6.99□□□□□ -1.29
CCDC9-203ENST00000596938 WDR73Q6P4I2 378 aa6.99□□□□□ -1.29
CCDC9-203ENST00000596938 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.99□□□□□ -1.29
CCDC9-203ENST00000596938 LYPD6BQ8NI32 183 aa6.99□□□□□ -1.29
CCDC9-203ENST00000596938 AP1S3Q96PC3 154 aa6.99□□□□□ -1.29
CCDC9-203ENST00000596938 DNAH8Q96JB1 4490 aa6.99□□□□□ -1.29
CCDC9-203ENST00000596938 hCG_2014768A0A024R1R8 64 aa6.98□□□□□ -1.29
CCDC9-203ENST00000596938 IGLV5-52A0A0A0MRZ9 124 aa6.98□□□□□ -1.29
CCDC9-203ENST00000596938 RBFOX3A6NFN3 312 aa6.98□□□□□ -1.29
CCDC9-203ENST00000596938 TMEM97Q5BJF2 176 aa6.98□□□□□ -1.29
CCDC9-203ENST00000596938 KCNIP4Q6PIL6 250 aa6.98□□□□□ -1.29
CCDC9-203ENST00000596938 NUDT10Q8NFP7 164 aa6.98□□□□□ -1.29
CCDC9-203ENST00000596938 RMI2Q96E14 147 aa6.98□□□□□ -1.29
CCDC9-203ENST00000596938 NUDT11Q96G61 164 aa6.98□□□□□ -1.29
CCDC9-203ENST00000596938 TPPP3Q9BW30 176 aa6.98□□□□□ -1.29
CCDC9-203ENST00000596938 TMEM262E9PQX1 116 aa6.97□□□□□ -1.29
CCDC9-203ENST00000596938 TMEM250H0YL14 139 aa6.97□□□□□ -1.29
CCDC9-203ENST00000596938 M0QY20 66 aa6.97□□□□□ -1.29
CCDC9-203ENST00000596938 PKIAP61925 76 aa6.97□□□□□ -1.29
CCDC9-203ENST00000596938 LYZL1Q6UWQ5 148 aa6.97□□□□□ -1.29
CCDC9-203ENST00000596938 ALKAL2Q6UX46 152 aa6.97□□□□□ -1.29
CCDC9-203ENST00000596938 OCC1Q8TAD7 63 aa6.97□□□□□ -1.29
CCDC9-203ENST00000596938 DNAJC30Q96LL9 226 aa6.97□□□□□ -1.29
CCDC9-203ENST00000596938 KLK12Q9UKR0 248 aa6.97□□□□□ -1.29
CCDC9-203ENST00000596938 H7C1H1 209 aa6.96□□□□□ -1.3
CCDC9-203ENST00000596938 NTF3P20783 257 aa6.96□□□□□ -1.3
CCDC9-203ENST00000596938 Q0VG73 95 aa6.96□□□□□ -1.3
CCDC9-203ENST00000596938 ATRAIDQ6UW56 229 aa6.96□□□□□ -1.3
CCDC9-203ENST00000596938 NTM-AS1Q6ZSK4 140 aa6.96□□□□□ -1.3
CCDC9-203ENST00000596938 TMEM70Q9BUB7 260 aa6.96□□□□□ -1.3
CCDC9-203ENST00000596938 K7EN84 100 aa6.95□□□□□ -1.3
CCDC9-203ENST00000596938 NDUFS6O75380 124 aaKnown RBP6.95□□□□□ -1.3
CCDC9-203ENST00000596938 TRGC1P0CF51 173 aa6.95□□□□□ -1.3
CCDC9-203ENST00000596938 CTRLP40313 264 aa6.95□□□□□ -1.3
CCDC9-203ENST00000596938 WFDC2Q14508 124 aa6.95□□□□□ -1.3
CCDC9-203ENST00000596938 Q8N976 141 aa6.95□□□□□ -1.3
CCDC9-203ENST00000596938 BAALCQ8WXS3 180 aa6.95□□□□□ -1.3
CCDC9-203ENST00000596938 UBE2WQ96B02 151 aa6.95□□□□□ -1.3
CCDC9-203ENST00000596938 CNFNQ9BYD5 112 aa6.95□□□□□ -1.3
CCDC9-203ENST00000596938 RPP21Q9H633 154 aaKnown RBP6.95□□□□□ -1.3
CCDC9-203ENST00000596938 IGKV2D-24A0A075B6R9 120 aa6.94□□□□□ -1.3
CCDC9-203ENST00000596938 EPM2AB3EWF7 344 aa6.94□□□□□ -1.3
CCDC9-203ENST00000596938 SUMO4Q6EEV6 95 aa6.94□□□□□ -1.3
CCDC9-203ENST00000596938 RASL11AQ6T310 242 aa6.94□□□□□ -1.3
CCDC9-203ENST00000596938 ENHOQ6UWT2 76 aa6.94□□□□□ -1.3
CCDC9-203ENST00000596938 CHCHD5Q9BSY4 110 aa6.94□□□□□ -1.3
CCDC9-203ENST00000596938 RNASE7Q9H1E1 156 aaKnown RBP6.94□□□□□ -1.3
CCDC9-203ENST00000596938 DPH3P1Q9H4G8 78 aa6.94□□□□□ -1.3
CCDC9-203ENST00000596938 TRBV25-1A0A075B6N4 114 aa6.93□□□□□ -1.3
CCDC9-203ENST00000596938 MGPP08493 103 aa6.93□□□□□ -1.3
CCDC9-203ENST00000596938 TWIST1Q15672 202 aa6.93□□□□□ -1.3
CCDC9-203ENST00000596938 IQCJQ1A5X6 159 aa6.93□□□□□ -1.3
CCDC9-203ENST00000596938 MPV17L2Q567V2 206 aa6.93□□□□□ -1.3
CCDC9-203ENST00000596938 FAM231DQ6ZW35 169 aa6.93□□□□□ -1.3
CCDC9-203ENST00000596938 NIT2Q9NQR4 276 aa6.93□□□□□ -1.3
CCDC9-203ENST00000596938 VPS13BQ7Z7G8 4022 aa6.93□□□□□ -1.3
CCDC9-203ENST00000596938 IGHV1-24A0A0C4DH33 117 aa6.92□□□□□ -1.3
CCDC9-203ENST00000596938 LECT2O14960 151 aa6.92□□□□□ -1.3
CCDC9-203ENST00000596938 ANGP03950 147 aaKnown RBP6.92□□□□□ -1.3
CCDC9-203ENST00000596938 NKX2-5P52952 324 aaPredicted RBP6.92□□□□□ -1.3
CCDC9-203ENST00000596938 FOXA3P55318 350 aaPredicted RBP6.92□□□□□ -1.3
CCDC9-203ENST00000596938 C15orf54Q8N8G6 183 aa6.92□□□□□ -1.3
CCDC9-203ENST00000596938 FRZBQ92765 325 aa6.92□□□□□ -1.3
CCDC9-203ENST00000596938 C1orf43Q9BWL3 253 aa6.92□□□□□ -1.3
CCDC9-203ENST00000596938 PRR34Q9NV39 138 aa6.92□□□□□ -1.3
CCDC9-203ENST00000596938 A0A1B0GVG6 124 aa6.91□□□□□ -1.3
CCDC9-203ENST00000596938 A8MWL6 223 aa6.91□□□□□ -1.3
CCDC9-203ENST00000596938 GATCO43716 136 aaKnown RBP6.91□□□□□ -1.3
CCDC9-203ENST00000596938 CRPP02741 224 aa6.91□□□□□ -1.3
CCDC9-203ENST00000596938 RBX1P62877 108 aa6.91□□□□□ -1.3
CCDC9-203ENST00000596938 MIAQ16674 131 aa6.91□□□□□ -1.3
CCDC9-203ENST00000596938 CT83Q5H943 113 aa6.91□□□□□ -1.3
CCDC9-203ENST00000596938 GTSF1Q8WW33 167 aa6.91□□□□□ -1.3
CCDC9-203ENST00000596938 PGLYRP4Q96LB8 373 aa6.91□□□□□ -1.3
CCDC9-203ENST00000596938 FAM210AQ96ND0 272 aa6.91□□□□□ -1.3
CCDC9-203ENST00000596938 EIF5A2Q9GZV4 153 aaKnown RBP6.91□□□□□ -1.3
CCDC9-203ENST00000596938 FAM30AQ9NZY2 134 aa6.91□□□□□ -1.3
CCDC9-203ENST00000596938 A0A1B0GUV1 79 aa6.9□□□□□ -1.3
CCDC9-203ENST00000596938 GAGE6Q13070 117 aa6.9□□□□□ -1.3
CCDC9-203ENST00000596938 Q6ZSA8 131 aa6.9□□□□□ -1.3
CCDC9-203ENST00000596938 SMIM15Q7Z3B0 74 aa6.9□□□□□ -1.3
CCDC9-203ENST00000596938 SRRM2Q9UQ35 2752 aaKnown RBP6.89□□□□□ -1.31
CCDC9-203ENST00000596938 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.89□□□□□ -1.31
CCDC9-203ENST00000596938 FAM229AH3BQW9 127 aa6.89□□□□□ -1.31
CCDC9-203ENST00000596938 SMR3BP02814 79 aaPredicted RBP6.89□□□□□ -1.31
CCDC9-203ENST00000596938 CEBPGP53567 150 aa6.89□□□□□ -1.31
CCDC9-203ENST00000596938 C14orf177Q52M58 125 aa6.89□□□□□ -1.31
CCDC9-203ENST00000596938 TEX261Q6UWH6 196 aa6.89□□□□□ -1.31
CCDC9-203ENST00000596938 LINC00269Q8N2A0 174 aa6.89□□□□□ -1.31
CCDC9-203ENST00000596938 GATD1Q8NB37 220 aa6.89□□□□□ -1.31
CCDC9-203ENST00000596938 SMIM7Q9BQ49 75 aa6.89□□□□□ -1.31
CCDC9-203ENST00000596938 TMEM243Q9BU79 118 aa6.89□□□□□ -1.31
CCDC9-203ENST00000596938 FAM231BA6NCW3 169 aa6.88□□□□□ -1.31
CCDC9-203ENST00000596938 ZNF727A8MUV8 499 aa6.88□□□□□ -1.31
CCDC9-203ENST00000596938 SRP19P09132 144 aaKnown RBP6.88□□□□□ -1.31
CCDC9-203ENST00000596938 Q5VSD8 79 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms