RNA–Protein interactions for RNA: ENST00000596900.5

SPTBN4-210, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best)

Gene SPTBN4, Length 1,857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-210ENST00000596900 GAGE12GP0CL81 117 aa16.46■□□□□ 0.23
SPTBN4-210ENST00000596900 GAGE12IP0CL82 117 aa16.46■□□□□ 0.23
SPTBN4-210ENST00000596900 EMP1P54849 157 aa16.46■□□□□ 0.23
SPTBN4-210ENST00000596900 C12orf57Q99622 126 aa16.46■□□□□ 0.23
SPTBN4-210ENST00000596900 TMEM70Q9BUB7 260 aa16.46■□□□□ 0.23
SPTBN4-210ENST00000596900 SDHAF1A6NFY7 115 aa16.46■□□□□ 0.22
SPTBN4-210ENST00000596900 MIFP14174 115 aa16.46■□□□□ 0.22
SPTBN4-210ENST00000596900 VCYO14598 125 aa16.45■□□□□ 0.22
SPTBN4-210ENST00000596900 POLR2KP53803 58 aaKnown RBP16.45■□□□□ 0.22
SPTBN4-210ENST00000596900 KRTDAPP60985 99 aa16.45■□□□□ 0.22
SPTBN4-210ENST00000596900 ORMDL2Q53FV1 153 aa16.45■□□□□ 0.22
SPTBN4-210ENST00000596900 ANK2Q01484 3957 aa16.45■□□□□ 0.22
SPTBN4-210ENST00000596900 KIR2DL4Q99706 377 aa16.44■□□□□ 0.22
SPTBN4-210ENST00000596900 PKD1L1Q8TDX9 2849 aa16.44■□□□□ 0.22
SPTBN4-210ENST00000596900 TCAPO15273 167 aa16.44■□□□□ 0.22
SPTBN4-210ENST00000596900 FCER1GP30273 86 aa16.44■□□□□ 0.22
SPTBN4-210ENST00000596900 ZNF479Q96JC4 524 aa16.44■□□□□ 0.22
SPTBN4-210ENST00000596900 A0A096LNJ9 63 aa16.43■□□□□ 0.22
SPTBN4-210ENST00000596900 TRBV27A0A0K0K1C4 114 aa16.43■□□□□ 0.22
SPTBN4-210ENST00000596900 DNAJC30Q96LL9 226 aa16.42■□□□□ 0.22
SPTBN4-210ENST00000596900 TNFRSF18Q9Y5U5 241 aa16.42■□□□□ 0.22
SPTBN4-210ENST00000596900 CMYA5Q8N3K9 4069 aa16.42■□□□□ 0.22
SPTBN4-210ENST00000596900 LYRM9A8MSI8 78 aa16.42■□□□□ 0.22
SPTBN4-210ENST00000596900 SCGB1D1O95968 90 aa16.42■□□□□ 0.22
SPTBN4-210ENST00000596900 C3orf79P0CE67 100 aa16.42■□□□□ 0.22
SPTBN4-210ENST00000596900 BTF3P20290 206 aaKnown RBP16.42■□□□□ 0.22
SPTBN4-210ENST00000596900 TP53TG1Q9Y2A0 90 aa16.42■□□□□ 0.22
SPTBN4-210ENST00000596900 C18orf15Q96N68 181 aa16.41■□□□□ 0.22
SPTBN4-210ENST00000596900 MAP1LC3CQ9BXW4 147 aa16.41■□□□□ 0.22
SPTBN4-210ENST00000596900 NUDT3O95989 172 aa16.4■□□□□ 0.22
SPTBN4-210ENST00000596900 G0S2P27469 103 aa16.4■□□□□ 0.22
SPTBN4-210ENST00000596900 IGHV4-28A0A0C4DH34 117 aa16.39■□□□□ 0.22
SPTBN4-210ENST00000596900 Q6ZSN1 163 aa16.39■□□□□ 0.22
SPTBN4-210ENST00000596900 LURAP1LQ8IV03 231 aa16.39■□□□□ 0.22
SPTBN4-210ENST00000596900 LINC00612Q8N6U2 182 aa16.39■□□□□ 0.22
SPTBN4-210ENST00000596900 TRBV10-1A0A0K0K1A3 114 aa16.38■□□□□ 0.21
SPTBN4-210ENST00000596900 Q8NAQ8 132 aa16.38■□□□□ 0.21
SPTBN4-210ENST00000596900 I3L3M4 83 aa16.37■□□□□ 0.21
SPTBN4-210ENST00000596900 K7EQD1 137 aa16.37■□□□□ 0.21
SPTBN4-210ENST00000596900 P0DMU3 169 aa16.37■□□□□ 0.21
SPTBN4-210ENST00000596900 FAM231AP0DMU4 169 aa16.37■□□□□ 0.21
SPTBN4-210ENST00000596900 FAM231CP0DMU5 169 aa16.37■□□□□ 0.21
SPTBN4-210ENST00000596900 DEFB130BP0DP73 79 aa16.37■□□□□ 0.21
SPTBN4-210ENST00000596900 DEFB130AP0DP74 79 aa16.37■□□□□ 0.21
SPTBN4-210ENST00000596900 NEGR1Q7Z3B1 354 aa16.37■□□□□ 0.21
SPTBN4-210ENST00000596900 NEXN-AS1Q8NBZ9 246 aa16.37■□□□□ 0.21
SPTBN4-210ENST00000596900 FAM222AQ5U5X8 452 aa16.37■□□□□ 0.21
SPTBN4-210ENST00000596900 TRGV4A0A0C4DH28 118 aa16.36■□□□□ 0.21
SPTBN4-210ENST00000596900 LINC01549A6NIU2 74 aa16.36■□□□□ 0.21
SPTBN4-210ENST00000596900 LINC00173Q6ZV60 143 aa16.36■□□□□ 0.21
SPTBN4-210ENST00000596900 SYS1-DBNDD2H3BUS1 97 aa16.35■□□□□ 0.21
SPTBN4-210ENST00000596900 KPRPQ5T749 579 aaPredicted RBP16.35■□□□□ 0.21
SPTBN4-210ENST00000596900 RIPPLY3P57055 190 aa16.35■□□□□ 0.21
SPTBN4-210ENST00000596900 DKK2Q9UBU2 259 aa16.35■□□□□ 0.21
SPTBN4-210ENST00000596900 TRBV6-4A0A1B0GX49 114 aa16.34■□□□□ 0.21
SPTBN4-210ENST00000596900 C20orf202A1L168 122 aa16.34■□□□□ 0.21
SPTBN4-210ENST00000596900 RPL36AP83881 106 aaKnown RBP16.34■□□□□ 0.21
SPTBN4-210ENST00000596900 RPL36ALQ969Q0 106 aaKnown RBP16.34■□□□□ 0.21
SPTBN4-210ENST00000596900 IFI27L1Q96BM0 104 aa16.34■□□□□ 0.21
SPTBN4-210ENST00000596900 ATP5LO75964 103 aa16.33■□□□□ 0.21
SPTBN4-210ENST00000596900 S100A12P80511 92 aa16.33■□□□□ 0.21
SPTBN4-210ENST00000596900 RHOHQ15669 191 aa16.33■□□□□ 0.21
SPTBN4-210ENST00000596900 PET117Q6UWS5 81 aa16.33■□□□□ 0.21
SPTBN4-210ENST00000596900 SLC25A29Q8N8R3 303 aa16.33■□□□□ 0.21
SPTBN4-210ENST00000596900 TEX48A0A1B0GUV7 120 aa16.33■□□□□ 0.2
SPTBN4-210ENST00000596900 TRBV7-3A0A075B6L6 115 aa16.32■□□□□ 0.2
SPTBN4-210ENST00000596900 DEFB4AO15263 64 aa16.32■□□□□ 0.2
SPTBN4-210ENST00000596900 C2orf66Q6UXQ4 117 aa16.32■□□□□ 0.2
SPTBN4-210ENST00000596900 TOMM6Q96B49 74 aa16.32■□□□□ 0.2
SPTBN4-210ENST00000596900 SPART-AS1P0CW21 52 aa16.31■□□□□ 0.2
SPTBN4-210ENST00000596900 CYSLTR1Q9Y271 337 aa16.31■□□□□ 0.2
SPTBN4-210ENST00000596900 FHL2Q14192 279 aa16.31■□□□□ 0.2
SPTBN4-210ENST00000596900 SPATA12Q7Z6I5 190 aa16.31■□□□□ 0.2
SPTBN4-210ENST00000596900 TSHBP01222 138 aa16.3■□□□□ 0.2
SPTBN4-210ENST00000596900 DAD1P61803 113 aa16.3■□□□□ 0.2
SPTBN4-210ENST00000596900 ZNRF2Q8NHG8 242 aa16.3■□□□□ 0.2
SPTBN4-210ENST00000596900 PRADC1Q9BSG0 188 aa16.3■□□□□ 0.2
SPTBN4-210ENST00000596900 H0Y8G0 127 aa16.29■□□□□ 0.2
SPTBN4-210ENST00000596900 CDPF1Q6NVV7 123 aa16.29■□□□□ 0.2
SPTBN4-210ENST00000596900 Q8N976 141 aa16.29■□□□□ 0.2
SPTBN4-210ENST00000596900 Q9UF83 564 aa16.29■□□□□ 0.2
SPTBN4-210ENST00000596900 NBEAL2Q6ZNJ1 2754 aa16.29■□□□□ 0.2
SPTBN4-210ENST00000596900 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.28■□□□□ 0.2
SPTBN4-210ENST00000596900 SCGB3A1Q96QR1 104 aa16.28■□□□□ 0.2
SPTBN4-210ENST00000596900 DAZ4Q86SG3 579 aaKnown RBP16.27■□□□□ 0.2
SPTBN4-210ENST00000596900 DAZ3Q9NR90 486 aaKnown RBP16.27■□□□□ 0.2
SPTBN4-210ENST00000596900 K7EIL1 84 aa16.27■□□□□ 0.19
SPTBN4-210ENST00000596900 PRB2P02812 416 aaPredicted RBP16.27■□□□□ 0.19
SPTBN4-210ENST00000596900 COTL1Q14019 142 aa16.27■□□□□ 0.19
SPTBN4-210ENST00000596900 DEFB104AQ8WTQ1 72 aa16.27■□□□□ 0.19
SPTBN4-210ENST00000596900 RETNQ9HD89 108 aa16.27■□□□□ 0.19
SPTBN4-210ENST00000596900 HHLA3Q9XRX5 114 aa16.27■□□□□ 0.19
SPTBN4-210ENST00000596900 DNAH3Q8TD57 4116 aa16.26■□□□□ 0.19
SPTBN4-210ENST00000596900 TEX43Q6ZNM6 134 aa16.26■□□□□ 0.19
SPTBN4-210ENST00000596900 ERASQ7Z444 233 aa16.26■□□□□ 0.19
SPTBN4-210ENST00000596900 PRSS1P07477 247 aa16.25■□□□□ 0.19
SPTBN4-210ENST00000596900 LINC01545Q5VT33 79 aa16.25■□□□□ 0.19
SPTBN4-210ENST00000596900 Q6ZN92 141 aa16.25■□□□□ 0.19
SPTBN4-210ENST00000596900 PHLDA1Q8WV24 401 aaPredicted RBP16.25■□□□□ 0.19
SPTBN4-210ENST00000596900 GAGE12JA6NER3 117 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms