RNA–Protein interactions for RNA: ENST00000596398.5

LINC00343-204, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 809 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-204ENST00000596398 TAS2R30P59541 319 aa4.4□□□□□ -1.71
LINC00343-204ENST00000596398 CYCSP99999 105 aaKnown RBP4.4□□□□□ -1.71
LINC00343-204ENST00000596398 UQCC1Q9NVA1 299 aa4.4□□□□□ -1.71
LINC00343-204ENST00000596398 SSPOA2VEC9 5147 aa4.4□□□□□ -1.71
LINC00343-204ENST00000596398 IGLV4-60A0A075B6I1 120 aa4.39□□□□□ -1.71
LINC00343-204ENST00000596398 TRAV8-4A0A0B4J246 113 aa4.39□□□□□ -1.71
LINC00343-204ENST00000596398 TRBV10-1A0A0K0K1A3 114 aa4.39□□□□□ -1.71
LINC00343-204ENST00000596398 GAGE10A6NGK3 116 aa4.39□□□□□ -1.71
LINC00343-204ENST00000596398 OR7C2O60412 319 aa4.39□□□□□ -1.71
LINC00343-204ENST00000596398 GCGP01275 180 aa4.39□□□□□ -1.71
LINC00343-204ENST00000596398 P01737 135 aa4.39□□□□□ -1.71
LINC00343-204ENST00000596398 FGF7P21781 194 aa4.39□□□□□ -1.71
LINC00343-204ENST00000596398 S100A4P26447 101 aaKnown RBP4.39□□□□□ -1.71
LINC00343-204ENST00000596398 RPL13AP40429 203 aaKnown RBP4.39□□□□□ -1.71
LINC00343-204ENST00000596398 PKIAP61925 76 aa4.39□□□□□ -1.71
LINC00343-204ENST00000596398 GNG5P63218 68 aa4.39□□□□□ -1.71
LINC00343-204ENST00000596398 MRPS10P82664 201 aaKnown RBP4.39□□□□□ -1.71
LINC00343-204ENST00000596398 PRR27Q6MZM9 219 aa4.39□□□□□ -1.71
LINC00343-204ENST00000596398 PHF5AQ7RTV0 110 aaKnown RBP4.39□□□□□ -1.71
LINC00343-204ENST00000596398 C20orf203Q8NBC4 194 aa4.39□□□□□ -1.71
LINC00343-204ENST00000596398 LINC00526Q96FQ7 95 aa4.39□□□□□ -1.71
LINC00343-204ENST00000596398 IGKV3D-20A0A0C4DH25 116 aa4.38□□□□□ -1.71
LINC00343-204ENST00000596398 H3BVH4 76 aa4.38□□□□□ -1.71
LINC00343-204ENST00000596398 EIF3GO75821 320 aaKnown RBP eCLIP4.38□□□□□ -1.71
LINC00343-204ENST00000596398 GZMBP10144 247 aa4.38□□□□□ -1.71
LINC00343-204ENST00000596398 BCAP31P51572 246 aa4.38□□□□□ -1.71
LINC00343-204ENST00000596398 RAB2AP61019 212 aa4.38□□□□□ -1.71
LINC00343-204ENST00000596398 UBE2L3P68036 154 aaKnown RBP4.38□□□□□ -1.71
LINC00343-204ENST00000596398 CTF1Q16619 201 aa4.38□□□□□ -1.71
LINC00343-204ENST00000596398 TPRXLQ17RH7 258 aa4.38□□□□□ -1.71
LINC00343-204ENST00000596398 KRTAP11-1Q8IUC1 163 aa4.38□□□□□ -1.71
LINC00343-204ENST00000596398 NEXN-AS1Q8NBZ9 246 aa4.38□□□□□ -1.71
LINC00343-204ENST00000596398 OR10G8Q8NGN5 311 aa4.38□□□□□ -1.71
LINC00343-204ENST00000596398 CMTM2Q8TAZ6 248 aa4.38□□□□□ -1.71
LINC00343-204ENST00000596398 CTDSP1Q9GZU7 261 aa4.38□□□□□ -1.71
LINC00343-204ENST00000596398 GSKIPQ9P0R6 139 aa4.38□□□□□ -1.71
LINC00343-204ENST00000596398 RAB26Q9ULW5 256 aa4.38□□□□□ -1.71
LINC00343-204ENST00000596398 RGS5O15539 181 aa4.37□□□□□ -1.71
LINC00343-204ENST00000596398 GAGE2BQ13066 116 aa4.37□□□□□ -1.71
LINC00343-204ENST00000596398 IL18Q14116 193 aa4.37□□□□□ -1.71
LINC00343-204ENST00000596398 IAH1Q2TAA2 248 aaPredicted RBP4.37□□□□□ -1.71
LINC00343-204ENST00000596398 SPANXN2Q5MJ10 180 aa4.37□□□□□ -1.71
LINC00343-204ENST00000596398 MCFD2Q8NI22 146 aa4.37□□□□□ -1.71
LINC00343-204ENST00000596398 SFRP2Q96HF1 295 aa4.37□□□□□ -1.71
LINC00343-204ENST00000596398 DERL1Q9BUN8 251 aa4.37□□□□□ -1.71
LINC00343-204ENST00000596398 NPCDR1Q9BY65 106 aa4.37□□□□□ -1.71
LINC00343-204ENST00000596398 OTORQ9NRC9 128 aa4.37□□□□□ -1.71
LINC00343-204ENST00000596398 OR5AC2Q9NZP5 309 aa4.37□□□□□ -1.71
LINC00343-204ENST00000596398 USH2AO75445 5202 aa4.37□□□□□ -1.71
LINC00343-204ENST00000596398 GVQW2A0A096LPI5 108 aaPredicted RBP4.36□□□□□ -1.71
LINC00343-204ENST00000596398 IGKV3OR2-268A0A0C4DH90 116 aa4.36□□□□□ -1.71
LINC00343-204ENST00000596398 C9orf170A2RU37 121 aa4.36□□□□□ -1.71
LINC00343-204ENST00000596398 L7N2F9 121 aa4.36□□□□□ -1.71
LINC00343-204ENST00000596398 EIF5AP63241 154 aaKnown RBP4.36□□□□□ -1.71
LINC00343-204ENST00000596398 OR11H4Q8NGC9 324 aa4.36□□□□□ -1.71
LINC00343-204ENST00000596398 THAP6Q8TBB0 222 aa4.36□□□□□ -1.71
LINC00343-204ENST00000596398 MITD1Q8WV92 249 aa4.36□□□□□ -1.71
LINC00343-204ENST00000596398 AP3S1Q92572 193 aa4.36□□□□□ -1.71
LINC00343-204ENST00000596398 NDFIP1Q9BT67 221 aa4.36□□□□□ -1.71
LINC00343-204ENST00000596398 FUNDC2Q9BWH2 189 aa4.36□□□□□ -1.71
LINC00343-204ENST00000596398 IL36BQ9NZH7 164 aa4.36□□□□□ -1.71
LINC00343-204ENST00000596398 PHLDA3Q9Y5J5 127 aa4.36□□□□□ -1.71
LINC00343-204ENST00000596398 IGLV7-46A0A075B6I9 117 aa4.35□□□□□ -1.71
LINC00343-204ENST00000596398 TRBV25-1A0A075B6N4 114 aa4.35□□□□□ -1.71
LINC00343-204ENST00000596398 TRBV6-1A0A0K0K1D8 114 aa4.35□□□□□ -1.71
LINC00343-204ENST00000596398 GRIFINA4D1Z8 144 aa4.35□□□□□ -1.71
LINC00343-204ENST00000596398 M0R381 172 aa4.35□□□□□ -1.71
LINC00343-204ENST00000596398 ARMS2P0C7Q2 107 aa4.35□□□□□ -1.71
LINC00343-204ENST00000596398 MT1HP80294 61 aa4.35□□□□□ -1.71
LINC00343-204ENST00000596398 C9orf116Q5BN46 136 aaPredicted RBP4.35□□□□□ -1.71
LINC00343-204ENST00000596398 CARD19Q96LW7 228 aa4.35□□□□□ -1.71
LINC00343-204ENST00000596398 VCX3BQ9H321 246 aa4.35□□□□□ -1.71
LINC00343-204ENST00000596398 LYRM2Q9NU23 88 aaPredicted RBP4.35□□□□□ -1.71
LINC00343-204ENST00000596398 MBD2Q9UBB5 411 aa4.35□□□□□ -1.71
LINC00343-204ENST00000596398 LSM5Q9Y4Y9 91 aaKnown RBP4.35□□□□□ -1.71
LINC00343-204ENST00000596398 FCGBPQ9Y6R7 5405 aaPredicted RBP4.35□□□□□ -1.71
LINC00343-204ENST00000596398 A0A087WZ39 114 aa4.34□□□□□ -1.71
LINC00343-204ENST00000596398 IGSF23A1L1A6 192 aa4.34□□□□□ -1.71
LINC00343-204ENST00000596398 S100A11P31949 105 aa4.34□□□□□ -1.71
LINC00343-204ENST00000596398 SULT1A2P50226 295 aa4.34□□□□□ -1.71
LINC00343-204ENST00000596398 ZNF56Q15929 161 aa4.34□□□□□ -1.71
LINC00343-204ENST00000596398 IQCJQ1A5X6 159 aa4.34□□□□□ -1.71
LINC00343-204ENST00000596398 SMUG1Q53HV7 270 aa4.34□□□□□ -1.71
LINC00343-204ENST00000596398 SDHCQ99643 169 aaPredicted RBP4.34□□□□□ -1.71
LINC00343-204ENST00000596398 RPP21Q9H633 154 aaKnown RBP4.34□□□□□ -1.71
LINC00343-204ENST00000596398 PSG8Q9UQ74 426 aa4.34□□□□□ -1.71
LINC00343-204ENST00000596398 IGHV1-24A0A0C4DH33 117 aa4.33□□□□□ -1.72
LINC00343-204ENST00000596398 B4DEV8 164 aa4.33□□□□□ -1.72
LINC00343-204ENST00000596398 M0R036 132 aa4.33□□□□□ -1.72
LINC00343-204ENST00000596398 SULT1A1P50225 295 aa4.33□□□□□ -1.72
LINC00343-204ENST00000596398 RAB4BP61018 213 aa4.33□□□□□ -1.72
LINC00343-204ENST00000596398 ZFP69Q49AA0 526 aa4.33□□□□□ -1.72
LINC00343-204ENST00000596398 FAM74A1Q5RGS3 127 aa4.33□□□□□ -1.72
LINC00343-204ENST00000596398 PRNTQ86SH4 94 aa4.33□□□□□ -1.72
LINC00343-204ENST00000596398 SMIM29Q86T20 159 aa4.33□□□□□ -1.72
LINC00343-204ENST00000596398 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.33□□□□□ -1.72
LINC00343-204ENST00000596398 AQP10Q96PS8 301 aa4.33□□□□□ -1.72
LINC00343-204ENST00000596398 NAA50Q9GZZ1 169 aaKnown RBP4.33□□□□□ -1.72
LINC00343-204ENST00000596398 C11orf1Q9H5F2 150 aa4.33□□□□□ -1.72
LINC00343-204ENST00000596398 CARHSP1Q9Y2V2 147 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms