RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 RHODO00212 210 aa8.65□□□□□ -1.03
NPC1-214ENST00000593280 PRSS1P07477 247 aa8.65□□□□□ -1.03
NPC1-214ENST00000593280 CFAP126Q5VTH2 177 aa8.65□□□□□ -1.03
NPC1-214ENST00000593280 UFSP1Q6NVU6 142 aa8.65□□□□□ -1.03
NPC1-214ENST00000593280 SPATA3Q8NHX4 192 aa8.65□□□□□ -1.03
NPC1-214ENST00000593280 RNASE8Q8TDE3 154 aaKnown RBP8.65□□□□□ -1.03
NPC1-214ENST00000593280 TOMM6Q96B49 74 aa8.65□□□□□ -1.03
NPC1-214ENST00000593280 TRBV27A0A0K0K1C4 114 aa8.64□□□□□ -1.03
NPC1-214ENST00000593280 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.64□□□□□ -1.03
NPC1-214ENST00000593280 G0S2P27469 103 aa8.64□□□□□ -1.03
NPC1-214ENST00000593280 RS1O15537 224 aa8.63□□□□□ -1.03
NPC1-214ENST00000593280 C2orf66Q6UXQ4 117 aa8.63□□□□□ -1.03
NPC1-214ENST00000593280 ZFP2Q6ZN57 461 aa8.63□□□□□ -1.03
NPC1-214ENST00000593280 C16orf74Q96GX8 76 aa8.63□□□□□ -1.03
NPC1-214ENST00000593280 SCGB3A1Q96QR1 104 aa8.63□□□□□ -1.03
NPC1-214ENST00000593280 TRGV1A0A0A0MS02 117 aa8.62□□□□□ -1.03
NPC1-214ENST00000593280 ODF1Q14990 250 aa8.62□□□□□ -1.03
NPC1-214ENST00000593280 Q6ZN92 141 aa8.62□□□□□ -1.03
NPC1-214ENST00000593280 CSNK1G2-AS1Q8NCQ2 148 aa8.62□□□□□ -1.03
NPC1-214ENST00000593280 DKK2Q9UBU2 259 aa8.62□□□□□ -1.03
NPC1-214ENST00000593280 CYSLTR1Q9Y271 337 aa8.62□□□□□ -1.03
NPC1-214ENST00000593280 VWFP04275 2813 aa8.62□□□□□ -1.03
NPC1-214ENST00000593280 NACAE9PAV3 2078 aa8.62□□□□□ -1.03
NPC1-214ENST00000593280 LINC01549A6NIU2 74 aa8.62□□□□□ -1.03
NPC1-214ENST00000593280 I3L3M4 83 aa8.61□□□□□ -1.03
NPC1-214ENST00000593280 HNRNPA3P51991 378 aaKnown RBP8.61□□□□□ -1.03
NPC1-214ENST00000593280 RHOHQ15669 191 aa8.61□□□□□ -1.03
NPC1-214ENST00000593280 TP53TG1Q9Y2A0 90 aa8.61□□□□□ -1.03
NPC1-214ENST00000593280 IGHV3-53P01767 116 aa8.6□□□□□ -1.03
NPC1-214ENST00000593280 P0DMU3 169 aa8.6□□□□□ -1.03
NPC1-214ENST00000593280 FAM231AP0DMU4 169 aa8.6□□□□□ -1.03
NPC1-214ENST00000593280 FAM231CP0DMU5 169 aa8.6□□□□□ -1.03
NPC1-214ENST00000593280 DAZ2Q13117 558 aaKnown RBP8.6□□□□□ -1.03
NPC1-214ENST00000593280 RRN3P1Q2M238 152 aa8.6□□□□□ -1.03
NPC1-214ENST00000593280 ERASQ7Z444 233 aa8.6□□□□□ -1.03
NPC1-214ENST00000593280 OR4C5Q8NGB2 326 aa8.6□□□□□ -1.03
NPC1-214ENST00000593280 ZMAT4Q9H898 229 aa8.6□□□□□ -1.03
NPC1-214ENST00000593280 TNFRSF18Q9Y5U5 241 aa8.6□□□□□ -1.03
NPC1-214ENST00000593280 A0A087WX48 190 aa8.59□□□□□ -1.03
NPC1-214ENST00000593280 TRAV12-1A0A0B4J245 112 aa8.59□□□□□ -1.03
NPC1-214ENST00000593280 DPM2O94777 84 aa8.59□□□□□ -1.03
NPC1-214ENST00000593280 TSHBP01222 138 aa8.59□□□□□ -1.03
NPC1-214ENST00000593280 IGKCP01834 107 aa8.59□□□□□ -1.03
NPC1-214ENST00000593280 KRTAP24-1Q3LI83 254 aa8.59□□□□□ -1.03
NPC1-214ENST00000593280 Q6ZSN1 163 aa8.59□□□□□ -1.03
NPC1-214ENST00000593280 Q6ZTI0 123 aa8.59□□□□□ -1.03
NPC1-214ENST00000593280 MRPL52Q86TS9 123 aaKnown RBP8.59□□□□□ -1.03
NPC1-214ENST00000593280 DEFB104AQ8WTQ1 72 aa8.59□□□□□ -1.03
NPC1-214ENST00000593280 NOP10Q9NPE3 64 aaKnown RBP8.59□□□□□ -1.03
NPC1-214ENST00000593280 TRAV4A0A0B4J268 109 aa8.58□□□□□ -1.04
NPC1-214ENST00000593280 PLAC8L1A1L4L8 177 aa8.58□□□□□ -1.04
NPC1-214ENST00000593280 WFDC9Q8NEX5 89 aa8.58□□□□□ -1.04
NPC1-214ENST00000593280 DNAJC30Q96LL9 226 aa8.58□□□□□ -1.04
NPC1-214ENST00000593280 M0R143 59 aa8.58□□□□□ -1.04
NPC1-214ENST00000593280 EREGO14944 169 aa8.58□□□□□ -1.04
NPC1-214ENST00000593280 PLNP26678 52 aa8.58□□□□□ -1.04
NPC1-214ENST00000593280 RPL39P62891 51 aaKnown RBP8.58□□□□□ -1.04
NPC1-214ENST00000593280 CTAG1AP78358 180 aa8.58□□□□□ -1.04
NPC1-214ENST00000593280 ANKRD39Q53RE8 183 aa8.58□□□□□ -1.04
NPC1-214ENST00000593280 SLC25A34Q6PIV7 304 aa8.58□□□□□ -1.04
NPC1-214ENST00000593280 NEXN-AS1Q8NBZ9 246 aa8.58□□□□□ -1.04
NPC1-214ENST00000593280 BAALCQ8WXS3 180 aa8.58□□□□□ -1.04
NPC1-214ENST00000593280 MRPL35Q9NZE8 188 aaKnown RBP8.58□□□□□ -1.04
NPC1-214ENST00000593280 CMYA5Q8N3K9 4069 aa8.58□□□□□ -1.04
NPC1-214ENST00000593280 JMJD1CQ15652 2540 aa8.57□□□□□ -1.04
NPC1-214ENST00000593280 ATRQ13535 2644 aa8.57□□□□□ -1.04
NPC1-214ENST00000593280 STPG4Q8N801 248 aa8.57□□□□□ -1.04
NPC1-214ENST00000593280 TMEM141Q96I45 108 aa8.57□□□□□ -1.04
NPC1-214ENST00000593280 TIMM17AQ99595 171 aa8.57□□□□□ -1.04
NPC1-214ENST00000593280 SNHG12Q9BXW3 62 aa8.57□□□□□ -1.04
NPC1-214ENST00000593280 IGIPA6NJ69 53 aa8.56□□□□□ -1.04
NPC1-214ENST00000593280 F8VRH5 84 aa8.56□□□□□ -1.04
NPC1-214ENST00000593280 WIPF1O43516 503 aa8.56□□□□□ -1.04
NPC1-214ENST00000593280 COX8AP10176 69 aa8.56□□□□□ -1.04
NPC1-214ENST00000593280 LBHQ53QV2 105 aaPredicted RBP8.56□□□□□ -1.04
NPC1-214ENST00000593280 ZNF479Q96JC4 524 aa8.56□□□□□ -1.04
NPC1-214ENST00000593280 OVOL2Q9BRP0 275 aa8.56□□□□□ -1.04
NPC1-214ENST00000593280 MRPS16Q9Y3D3 137 aaKnown RBP8.56□□□□□ -1.04
NPC1-214ENST00000593280 CHTOPQ9Y3Y2 248 aaKnown RBP8.56□□□□□ -1.04
NPC1-214ENST00000593280 TRRAPQ9Y4A5 3859 aa8.56□□□□□ -1.04
NPC1-214ENST00000593280 TRGV2A0A075B6R0 118 aa8.55□□□□□ -1.04
NPC1-214ENST00000593280 C20orf203Q8NBC4 194 aa8.55□□□□□ -1.04
NPC1-214ENST00000593280 TP73-AS1Q9UF72 201 aa8.55□□□□□ -1.04
NPC1-214ENST00000593280 GAGE12BA1L429 117 aa8.54□□□□□ -1.04
NPC1-214ENST00000593280 K7EQD1 137 aa8.54□□□□□ -1.04
NPC1-214ENST00000593280 GAGE7O76087 117 aa8.54□□□□□ -1.04
NPC1-214ENST00000593280 GAGE12FP0CL80 117 aa8.54□□□□□ -1.04
NPC1-214ENST00000593280 GAGE12GP0CL81 117 aa8.54□□□□□ -1.04
NPC1-214ENST00000593280 GAGE12IP0CL82 117 aa8.54□□□□□ -1.04
NPC1-214ENST00000593280 APOC4P55056 127 aa8.54□□□□□ -1.04
NPC1-214ENST00000593280 TCTAP57738 103 aa8.54□□□□□ -1.04
NPC1-214ENST00000593280 C3orf56Q8N813 242 aa8.54□□□□□ -1.04
NPC1-214ENST00000593280 Q9UF83 564 aa8.54□□□□□ -1.04
NPC1-214ENST00000593280 HHLA3Q9XRX5 114 aa8.54□□□□□ -1.04
NPC1-214ENST00000593280 FBN1P35555 2871 aaKnown RBP8.54□□□□□ -1.04
NPC1-214ENST00000593280 PRSS29PA6NIE9 313 aa8.54□□□□□ -1.04
NPC1-214ENST00000593280 NMUP48645 174 aa8.54□□□□□ -1.04
NPC1-214ENST00000593280 PMVKQ15126 192 aa8.54□□□□□ -1.04
NPC1-214ENST00000593280 ZC2HC1BQ5TFG8 222 aa8.54□□□□□ -1.04
NPC1-214ENST00000593280 KIR2DL5BQ8NHK3 375 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms