RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 RAX2Q96IS3 184 aa12.16□□□□□ -0.46
PRKCSH-217ENST00000592741 SPAG8Q99932 426 aaPredicted RBP12.16□□□□□ -0.46
PRKCSH-217ENST00000592741 EDA2RQ9HAV5 297 aa12.16□□□□□ -0.46
PRKCSH-217ENST00000592741 CREBBPQ92793 2442 aa12.15□□□□□ -0.46
PRKCSH-217ENST00000592741 GAGE12BA1L429 117 aa12.15□□□□□ -0.46
PRKCSH-217ENST00000592741 K7ERJ3 54 aa12.15□□□□□ -0.46
PRKCSH-217ENST00000592741 FABP2P12104 132 aa12.15□□□□□ -0.46
PRKCSH-217ENST00000592741 SCGB2A2Q13296 93 aa12.15□□□□□ -0.46
PRKCSH-217ENST00000592741 SAMD5Q5TGI4 173 aa12.15□□□□□ -0.46
PRKCSH-217ENST00000592741 CENPEQ02224 2701 aa12.15□□□□□ -0.46
PRKCSH-217ENST00000592741 TRBV7-3A0A075B6L6 115 aa12.14□□□□□ -0.47
PRKCSH-217ENST00000592741 ZNF815PA8K554 130 aa12.14□□□□□ -0.47
PRKCSH-217ENST00000592741 M0R2P5 195 aa12.14□□□□□ -0.47
PRKCSH-217ENST00000592741 CD300EQ496F6 205 aaPredicted RBP12.14□□□□□ -0.47
PRKCSH-217ENST00000592741 A8MWV9 139 aa12.14□□□□□ -0.47
PRKCSH-217ENST00000592741 EMP1P54849 157 aa12.14□□□□□ -0.47
PRKCSH-217ENST00000592741 PHLDA1Q8WV24 401 aaPredicted RBP12.14□□□□□ -0.47
PRKCSH-217ENST00000592741 SPCS1Q9Y6A9 102 aa12.14□□□□□ -0.47
PRKCSH-217ENST00000592741 PIK3CD-AS1Q5SR53 167 aa12.13□□□□□ -0.47
PRKCSH-217ENST00000592741 HIST2H2BDQ6DRA6 164 aa12.13□□□□□ -0.47
PRKCSH-217ENST00000592741 ABCA12Q86UK0 2595 aa12.13□□□□□ -0.47
PRKCSH-217ENST00000592741 INSP01308 110 aa12.13□□□□□ -0.47
PRKCSH-217ENST00000592741 C20orf203Q8NBC4 194 aa12.13□□□□□ -0.47
PRKCSH-217ENST00000592741 OR5A1Q8NGJ0 315 aa12.13□□□□□ -0.47
PRKCSH-217ENST00000592741 CBY1Q9Y3M2 126 aa12.13□□□□□ -0.47
PRKCSH-217ENST00000592741 TEX15Q9BXT5 2789 aa12.12□□□□□ -0.47
PRKCSH-217ENST00000592741 IGHV3-73A0A0B4J1V6 119 aa12.12□□□□□ -0.47
PRKCSH-217ENST00000592741 P0DMU3 169 aa12.12□□□□□ -0.47
PRKCSH-217ENST00000592741 FAM231AP0DMU4 169 aa12.12□□□□□ -0.47
PRKCSH-217ENST00000592741 FAM231CP0DMU5 169 aa12.12□□□□□ -0.47
PRKCSH-217ENST00000592741 PTH2Q96A98 100 aa12.12□□□□□ -0.47
PRKCSH-217ENST00000592741 LINC01587Q99440 93 aa12.12□□□□□ -0.47
PRKCSH-217ENST00000592741 LINC00467Q9BRT7 94 aa12.12□□□□□ -0.47
PRKCSH-217ENST00000592741 TRAV25A0A0B4J276 109 aa12.11□□□□□ -0.47
PRKCSH-217ENST00000592741 SCGB1D4Q6XE38 83 aa12.11□□□□□ -0.47
PRKCSH-217ENST00000592741 SORL1Q92673 2214 aa12.11□□□□□ -0.47
PRKCSH-217ENST00000592741 C12orf74Q32Q52 190 aa12.11□□□□□ -0.47
PRKCSH-217ENST00000592741 TMEM170BQ5T4T1 132 aa12.11□□□□□ -0.47
PRKCSH-217ENST00000592741 ESM1Q9NQ30 184 aa12.1□□□□□ -0.47
PRKCSH-217ENST00000592741 A0A1W2PRX2 142 aa12.1□□□□□ -0.47
PRKCSH-217ENST00000592741 PRM2P04554 102 aa12.1□□□□□ -0.47
PRKCSH-217ENST00000592741 FHL3Q13643 280 aa12.1□□□□□ -0.47
PRKCSH-217ENST00000592741 ZNRF2Q8NHG8 242 aa12.1□□□□□ -0.47
PRKCSH-217ENST00000592741 CLUHP3Q96NS8 147 aa12.1□□□□□ -0.47
PRKCSH-217ENST00000592741 TNFRSF18Q9Y5U5 241 aa12.1□□□□□ -0.47
PRKCSH-217ENST00000592741 PROK1P58294 105 aa12.09□□□□□ -0.47
PRKCSH-217ENST00000592741 OCIAD2Q56VL3 154 aa12.09□□□□□ -0.47
PRKCSH-217ENST00000592741 HIST2H2BCQ6DN03 193 aa12.09□□□□□ -0.47
PRKCSH-217ENST00000592741 NFE4Q86UQ8 179 aa12.09□□□□□ -0.47
PRKCSH-217ENST00000592741 C11orf44Q8N8P7 122 aa12.09□□□□□ -0.47
PRKCSH-217ENST00000592741 SPXQ9BT56 116 aa12.09□□□□□ -0.47
PRKCSH-217ENST00000592741 CCL24O00175 119 aa12.08□□□□□ -0.47
PRKCSH-217ENST00000592741 CD28P10747 220 aa12.08□□□□□ -0.47
PRKCSH-217ENST00000592741 RBX1P62877 108 aa12.08□□□□□ -0.47
PRKCSH-217ENST00000592741 PLEKHB2Q96CS7 222 aa12.08□□□□□ -0.47
PRKCSH-217ENST00000592741 OPRPNQ99935 248 aaPredicted RBP12.08□□□□□ -0.47
PRKCSH-217ENST00000592741 APCP25054 2843 aa12.08□□□□□ -0.48
PRKCSH-217ENST00000592741 IGLL5B9A064 214 aa12.08□□□□□ -0.48
PRKCSH-217ENST00000592741 RHODO00212 210 aa12.08□□□□□ -0.48
PRKCSH-217ENST00000592741 C11orf72Q8NBR9 251 aa12.08□□□□□ -0.48
PRKCSH-217ENST00000592741 ODF3L2Q3SX64 289 aa12.07□□□□□ -0.48
PRKCSH-217ENST00000592741 CFAP126Q5VTH2 177 aa12.07□□□□□ -0.48
PRKCSH-217ENST00000592741 STHQ8IWL8 128 aa12.07□□□□□ -0.48
PRKCSH-217ENST00000592741 IGLV4-3A0A075B6K6 122 aa12.07□□□□□ -0.48
PRKCSH-217ENST00000592741 A0A1B0GWB2 263 aa12.07□□□□□ -0.48
PRKCSH-217ENST00000592741 TMEM238LA0A1B0GVL6 79 aa12.06□□□□□ -0.48
PRKCSH-217ENST00000592741 A6NJY4 79 aa12.06□□□□□ -0.48
PRKCSH-217ENST00000592741 SRSF9Q13242 221 aaKnown RBP eCLIP12.06□□□□□ -0.48
PRKCSH-217ENST00000592741 ZNF479Q96JC4 524 aa12.06□□□□□ -0.48
PRKCSH-217ENST00000592741 VCX2Q9H322 139 aa12.06□□□□□ -0.48
PRKCSH-217ENST00000592741 YAE1D1Q9NRH1 226 aa12.06□□□□□ -0.48
PRKCSH-217ENST00000592741 MRPL16Q9NX20 251 aaKnown RBP12.05□□□□□ -0.48
PRKCSH-217ENST00000592741 PYGO1Q9Y3Y4 419 aa12.05□□□□□ -0.48
PRKCSH-217ENST00000592741 KRTAP1-1Q07627 177 aa12.05□□□□□ -0.48
PRKCSH-217ENST00000592741 BEAN1Q3B7T3 259 aa12.05□□□□□ -0.48
PRKCSH-217ENST00000592741 XCL2Q9UBD3 114 aa12.05□□□□□ -0.48
PRKCSH-217ENST00000592741 TSSC4Q9Y5U2 329 aaPredicted RBP12.05□□□□□ -0.48
PRKCSH-217ENST00000592741 LGALS3P17931 250 aaKnown RBP12.04□□□□□ -0.48
PRKCSH-217ENST00000592741 TSPEAR-AS2P59090 65 aa12.04□□□□□ -0.48
PRKCSH-217ENST00000592741 RNF151Q2KHN1 245 aa12.04□□□□□ -0.48
PRKCSH-217ENST00000592741 CITED2Q99967 270 aaPredicted RBP12.04□□□□□ -0.48
PRKCSH-217ENST00000592741 A0A0J9YY99 117 aa12.04□□□□□ -0.48
PRKCSH-217ENST00000592741 TMEM223A0PJW6 202 aa12.04□□□□□ -0.48
PRKCSH-217ENST00000592741 J3QQQ9 107 aa12.04□□□□□ -0.48
PRKCSH-217ENST00000592741 Q6ZSN1 163 aa12.04□□□□□ -0.48
PRKCSH-217ENST00000592741 ITPR3Q14573 2671 aa12.03□□□□□ -0.48
PRKCSH-217ENST00000592741 K7ERU9 68 aa12.03□□□□□ -0.48
PRKCSH-217ENST00000592741 LEPROTO15243 131 aa12.03□□□□□ -0.48
PRKCSH-217ENST00000592741 RS1O15537 224 aa12.03□□□□□ -0.48
PRKCSH-217ENST00000592741 RNASE1P07998 156 aaKnown RBP12.03□□□□□ -0.48
PRKCSH-217ENST00000592741 RRN3P1Q2M238 152 aa12.03□□□□□ -0.48
PRKCSH-217ENST00000592741 DNAJC30Q96LL9 226 aa12.03□□□□□ -0.48
PRKCSH-217ENST00000592741 C16orf95Q9H693 158 aa12.03□□□□□ -0.48
PRKCSH-217ENST00000592741 IGHV3-53P01767 116 aa12.02□□□□□ -0.48
PRKCSH-217ENST00000592741 ZNF22P17026 224 aaPredicted RBP12.02□□□□□ -0.48
PRKCSH-217ENST00000592741 ZNF469Q96JG9 3925 aaPredicted RBP12.02□□□□□ -0.48
PRKCSH-217ENST00000592741 AKAP9Q99996 3911 aa12.02□□□□□ -0.48
PRKCSH-217ENST00000592741 EPG5Q9HCE0 2579 aa12.02□□□□□ -0.49
PRKCSH-217ENST00000592741 A0A0J9YXV3 536 aa12.02□□□□□ -0.49
PRKCSH-217ENST00000592741 CRYBA4P53673 196 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms