RNA–Protein interactions for RNA: ENST00000591338.1

LINC00662-208, long intergenic non-protein coding RNA 662, humanhuman

TSL 2

Gene LINC00662, Length 436 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-208ENST00000591338 HIST1H2BBP33778 126 aa8.42□□□□□ -1.06
LINC00662-208ENST00000591338 HIST1H2BDP58876 126 aa8.42□□□□□ -1.06
LINC00662-208ENST00000591338 HIST1H2BCP62807 126 aa8.42□□□□□ -1.06
LINC00662-208ENST00000591338 HIST2H2BEQ16778 126 aa8.42□□□□□ -1.06
LINC00662-208ENST00000591338 C12orf74Q32Q52 190 aa8.42□□□□□ -1.06
LINC00662-208ENST00000591338 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.42□□□□□ -1.06
LINC00662-208ENST00000591338 HIST1H2BHQ93079 126 aa8.42□□□□□ -1.06
LINC00662-208ENST00000591338 HIST1H2BNQ99877 126 aa8.42□□□□□ -1.06
LINC00662-208ENST00000591338 HIST1H2BMQ99879 126 aa8.42□□□□□ -1.06
LINC00662-208ENST00000591338 HUWE1Q7Z6Z7 4374 aaKnown RBP8.41□□□□□ -1.06
LINC00662-208ENST00000591338 TRGV4A0A0C4DH28 118 aa8.41□□□□□ -1.06
LINC00662-208ENST00000591338 TNFRSF6BO95407 300 aa8.41□□□□□ -1.06
LINC00662-208ENST00000591338 NPYP01303 97 aa8.41□□□□□ -1.06
LINC00662-208ENST00000591338 RAB5BP61020 215 aa8.41□□□□□ -1.06
LINC00662-208ENST00000591338 NRACQ8N912 160 aa8.41□□□□□ -1.06
LINC00662-208ENST00000591338 EDA2RQ9HAV5 297 aa8.41□□□□□ -1.06
LINC00662-208ENST00000591338 DNAH9Q9NYC9 4486 aa8.41□□□□□ -1.06
LINC00662-208ENST00000591338 H7C1H1 209 aa8.4□□□□□ -1.06
LINC00662-208ENST00000591338 ATP5G1P05496 136 aa8.4□□□□□ -1.06
LINC00662-208ENST00000591338 P0DMU3 169 aa8.4□□□□□ -1.06
LINC00662-208ENST00000591338 FAM231AP0DMU4 169 aa8.4□□□□□ -1.06
LINC00662-208ENST00000591338 FAM231CP0DMU5 169 aa8.4□□□□□ -1.06
LINC00662-208ENST00000591338 HOXA5P20719 270 aa8.4□□□□□ -1.06
LINC00662-208ENST00000591338 C11orf45Q8TAV5 145 aa8.4□□□□□ -1.06
LINC00662-208ENST00000591338 C18orf32Q8TCD1 76 aa8.4□□□□□ -1.06
LINC00662-208ENST00000591338 RPL39LQ96EH5 51 aaKnown RBP8.4□□□□□ -1.06
LINC00662-208ENST00000591338 NIT2Q9NQR4 276 aa8.4□□□□□ -1.06
LINC00662-208ENST00000591338 Q9UF83 564 aa8.4□□□□□ -1.06
LINC00662-208ENST00000591338 LAMTOR2Q9Y2Q5 125 aa8.4□□□□□ -1.06
LINC00662-208ENST00000591338 TRBV6-4A0A1B0GX49 114 aa8.39□□□□□ -1.07
LINC00662-208ENST00000591338 PPP1R17O96001 155 aa8.39□□□□□ -1.07
LINC00662-208ENST00000591338 Q0VG73 95 aa8.39□□□□□ -1.07
LINC00662-208ENST00000591338 IQCJQ1A5X6 159 aa8.39□□□□□ -1.07
LINC00662-208ENST00000591338 OR10J3Q5JRS4 329 aa8.39□□□□□ -1.07
LINC00662-208ENST00000591338 SLC25A29Q8N8R3 303 aa8.39□□□□□ -1.07
LINC00662-208ENST00000591338 HHLA3Q9XRX5 114 aa8.39□□□□□ -1.07
LINC00662-208ENST00000591338 TRBV6-5A0A0K0K1A5 114 aa8.38□□□□□ -1.07
LINC00662-208ENST00000591338 LOC389332A0A1B0GUA5 103 aa8.38□□□□□ -1.07
LINC00662-208ENST00000591338 PRSS47A8MTI9 375 aa8.38□□□□□ -1.07
LINC00662-208ENST00000591338 NDUFA6P56556 154 aa8.38□□□□□ -1.07
LINC00662-208ENST00000591338 NANOS2P60321 138 aaKnown RBP8.38□□□□□ -1.07
LINC00662-208ENST00000591338 C20orf78Q9BR46 151 aa8.38□□□□□ -1.07
LINC00662-208ENST00000591338 TMA7Q9Y2S6 64 aaKnown RBP8.38□□□□□ -1.07
LINC00662-208ENST00000591338 TENM3Q9P273 2699 aa8.37□□□□□ -1.07
LINC00662-208ENST00000591338 F5H768 121 aa8.37□□□□□ -1.07
LINC00662-208ENST00000591338 K7EQD1 137 aa8.37□□□□□ -1.07
LINC00662-208ENST00000591338 HTN3P15516 51 aa8.37□□□□□ -1.07
LINC00662-208ENST00000591338 CRYBA4P53673 196 aa8.37□□□□□ -1.07
LINC00662-208ENST00000591338 Q6ZTC4 211 aa8.37□□□□□ -1.07
LINC00662-208ENST00000591338 NEXN-AS1Q8NBZ9 246 aa8.37□□□□□ -1.07
LINC00662-208ENST00000591338 DNAJC30Q96LL9 226 aa8.37□□□□□ -1.07
LINC00662-208ENST00000591338 MAP1LC3AQ9H492 121 aa8.37□□□□□ -1.07
LINC00662-208ENST00000591338 ST20Q9HBF5 79 aa8.37□□□□□ -1.07
LINC00662-208ENST00000591338 PRO0255Q9UI72 69 aa8.37□□□□□ -1.07
LINC00662-208ENST00000591338 TRBV10-1A0A0K0K1A3 114 aa8.36□□□□□ -1.07
LINC00662-208ENST00000591338 IFI27P40305 119 aaPredicted RBP8.36□□□□□ -1.07
LINC00662-208ENST00000591338 POLR2KP53803 58 aaKnown RBP8.36□□□□□ -1.07
LINC00662-208ENST00000591338 SUMO2P61956 95 aaKnown RBP8.36□□□□□ -1.07
LINC00662-208ENST00000591338 RHOHQ15669 191 aa8.36□□□□□ -1.07
LINC00662-208ENST00000591338 NIT1Q86X76 327 aa8.36□□□□□ -1.07
LINC00662-208ENST00000591338 BAGE3Q86Y29 109 aa8.36□□□□□ -1.07
LINC00662-208ENST00000591338 PRSS3P2Q8NHM4 247 aa8.36□□□□□ -1.07
LINC00662-208ENST00000591338 PRADC1Q9BSG0 188 aa8.36□□□□□ -1.07
LINC00662-208ENST00000591338 TNFRSF18Q9Y5U5 241 aa8.36□□□□□ -1.07
LINC00662-208ENST00000591338 LOC100131303A0A0U1RQF7 123 aa8.35□□□□□ -1.07
LINC00662-208ENST00000591338 Q8N8P6 123 aa8.35□□□□□ -1.07
LINC00662-208ENST00000591338 ZNRF2Q8NHG8 242 aa8.35□□□□□ -1.07
LINC00662-208ENST00000591338 URB1-AS1Q96HZ7 61 aa8.35□□□□□ -1.07
LINC00662-208ENST00000591338 VSIG2Q96IQ7 327 aa8.35□□□□□ -1.07
LINC00662-208ENST00000591338 TMEM70Q9BUB7 260 aa8.35□□□□□ -1.07
LINC00662-208ENST00000591338 MEGF8Q7Z7M0 2845 aa8.34□□□□□ -1.07
LINC00662-208ENST00000591338 IGLV2-18A0A075B6J9 118 aa8.34□□□□□ -1.07
LINC00662-208ENST00000591338 TRBV7-3A0A075B6L6 115 aa8.34□□□□□ -1.07
LINC00662-208ENST00000591338 GAGE12JA6NER3 117 aa8.34□□□□□ -1.07
LINC00662-208ENST00000591338 SDHAF1A6NFY7 115 aa8.34□□□□□ -1.07
LINC00662-208ENST00000591338 VCYO14598 125 aa8.34□□□□□ -1.07
LINC00662-208ENST00000591338 NUPR1O60356 82 aa8.34□□□□□ -1.07
LINC00662-208ENST00000591338 LINC00614P0C842 121 aa8.34□□□□□ -1.07
LINC00662-208ENST00000591338 RPL32P62910 135 aaKnown RBP8.34□□□□□ -1.07
LINC00662-208ENST00000591338 RPL36AP83881 106 aaKnown RBP8.34□□□□□ -1.07
LINC00662-208ENST00000591338 GAGE1Q13065 139 aa8.34□□□□□ -1.07
LINC00662-208ENST00000591338 GAGE4Q13068 117 aa8.34□□□□□ -1.07
LINC00662-208ENST00000591338 GAGE5Q13069 117 aa8.34□□□□□ -1.07
LINC00662-208ENST00000591338 GAGE13Q4V321 117 aa8.34□□□□□ -1.07
LINC00662-208ENST00000591338 COA6Q5JTJ3 125 aaKnown RBP8.34□□□□□ -1.07
LINC00662-208ENST00000591338 RPL36ALQ969Q0 106 aaKnown RBP8.34□□□□□ -1.07
LINC00662-208ENST00000591338 SMIM2Q9BVW6 85 aa8.34□□□□□ -1.07
LINC00662-208ENST00000591338 TRAV26-1A0A087WT03 109 aa8.33□□□□□ -1.08
LINC00662-208ENST00000591338 DEFB131BA0A096LNP1 70 aa8.33□□□□□ -1.08
LINC00662-208ENST00000591338 A0A0J9YY99 117 aa8.33□□□□□ -1.08
LINC00662-208ENST00000591338 SERF1AO75920 110 aa8.33□□□□□ -1.08
LINC00662-208ENST00000591338 S100A6P06703 90 aa8.33□□□□□ -1.08
LINC00662-208ENST00000591338 GYPEP15421 78 aa8.33□□□□□ -1.08
LINC00662-208ENST00000591338 PMCHP20382 165 aa8.33□□□□□ -1.08
LINC00662-208ENST00000591338 LINC00310P59036 64 aa8.33□□□□□ -1.08
LINC00662-208ENST00000591338 NEGR1Q7Z3B1 354 aa8.33□□□□□ -1.08
LINC00662-208ENST00000591338 NXT2Q9NPJ8 142 aaKnown RBP8.33□□□□□ -1.08
LINC00662-208ENST00000591338 COL7A1Q02388 2944 aa8.32□□□□□ -1.08
LINC00662-208ENST00000591338 TRAV10A0A0B4J240 114 aa8.32□□□□□ -1.08
LINC00662-208ENST00000591338 TRBV27A0A0K0K1C4 114 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms