RNA–Protein interactions for RNA: ENST00000591247.5

LSM12-204, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,484 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-204ENST00000591247 KRTAP1-1Q07627 177 aa12.6□□□□□ -0.39
LSM12-204ENST00000591247 MDFICQ9P1T7 246 aa12.6□□□□□ -0.39
LSM12-204ENST00000591247 ACANP16112 2415 aa12.59□□□□□ -0.39
LSM12-204ENST00000591247 POM121L12Q8N7R1 296 aa12.59□□□□□ -0.39
LSM12-204ENST00000591247 DLX4Q92988 240 aaPredicted RBP12.59□□□□□ -0.39
LSM12-204ENST00000591247 IGHV3-16A0A0C4DH30 117 aa12.59□□□□□ -0.39
LSM12-204ENST00000591247 MYMXA0A1B0GTQ4 84 aa12.58□□□□□ -0.4
LSM12-204ENST00000591247 KNCNA6PVL3 124 aa12.58□□□□□ -0.4
LSM12-204ENST00000591247 H7C1H1 209 aa12.58□□□□□ -0.4
LSM12-204ENST00000591247 J3QKU1 62 aa12.58□□□□□ -0.4
LSM12-204ENST00000591247 APOMO95445 188 aa12.58□□□□□ -0.4
LSM12-204ENST00000591247 MORN3Q6PF18 240 aaPredicted RBP12.58□□□□□ -0.4
LSM12-204ENST00000591247 KLHL30-AS1Q8NEE0 82 aa12.58□□□□□ -0.4
LSM12-204ENST00000591247 C20orf78Q9BR46 151 aa12.58□□□□□ -0.4
LSM12-204ENST00000591247 TRAV12-1A0A0B4J245 112 aa12.57□□□□□ -0.4
LSM12-204ENST00000591247 OR11H12B2RN74 326 aa12.57□□□□□ -0.4
LSM12-204ENST00000591247 F8VRH5 84 aa12.57□□□□□ -0.4
LSM12-204ENST00000591247 DUSP14O95147 198 aaKnown RBP12.57□□□□□ -0.4
LSM12-204ENST00000591247 Q8N1Y9 231 aa12.57□□□□□ -0.4
LSM12-204ENST00000591247 OR11H2Q8NH07 326 aa12.57□□□□□ -0.4
LSM12-204ENST00000591247 C9orf85Q96MD7 179 aa12.57□□□□□ -0.4
LSM12-204ENST00000591247 FOXI1Q12951 378 aa12.57□□□□□ -0.4
LSM12-204ENST00000591247 TMEM61Q8N0U2 210 aa12.57□□□□□ -0.4
LSM12-204ENST00000591247 DEFB131AP59861 70 aa12.56□□□□□ -0.4
LSM12-204ENST00000591247 IGHV1OR15-1A0A075B7D0 117 aa12.56□□□□□ -0.4
LSM12-204ENST00000591247 A0A087WWL8 130 aa12.56□□□□□ -0.4
LSM12-204ENST00000591247 TEX29Q8N6K0 151 aa12.56□□□□□ -0.4
LSM12-204ENST00000591247 ATP6V0E2Q8NHE4 81 aa12.56□□□□□ -0.4
LSM12-204ENST00000591247 SCGB2A2Q13296 93 aa12.55□□□□□ -0.4
LSM12-204ENST00000591247 C1QTNF4Q9BXJ3 329 aa12.55□□□□□ -0.4
LSM12-204ENST00000591247 PEMTQ9UBM1 199 aa12.55□□□□□ -0.4
LSM12-204ENST00000591247 CYSLTR1Q9Y271 337 aa12.55□□□□□ -0.4
LSM12-204ENST00000591247 RBMY1A1P0DJD3 496 aaKnown RBP12.55□□□□□ -0.4
LSM12-204ENST00000591247 RBMY1CP0DJD4 496 aa12.55□□□□□ -0.4
LSM12-204ENST00000591247 RBMY1FQ15415 496 aaKnown RBP12.55□□□□□ -0.4
LSM12-204ENST00000591247 CFAP126Q5VTH2 177 aa12.55□□□□□ -0.4
LSM12-204ENST00000591247 MRPL16Q9NX20 251 aaKnown RBP12.55□□□□□ -0.4
LSM12-204ENST00000591247 PGPEP1Q9NXJ5 209 aa12.55□□□□□ -0.4
LSM12-204ENST00000591247 C11orf44Q8N8P7 122 aa12.54□□□□□ -0.4
LSM12-204ENST00000591247 SUMO4Q6EEV6 95 aa12.54□□□□□ -0.4
LSM12-204ENST00000591247 UNC79Q9P2D8 2635 aa12.54□□□□□ -0.4
LSM12-204ENST00000591247 SMCPP49901 116 aaPredicted RBP12.53□□□□□ -0.4
LSM12-204ENST00000591247 SYT8Q8NBV8 401 aa12.53□□□□□ -0.4
LSM12-204ENST00000591247 RBMY1BA6NDE4 496 aaKnown RBP12.53□□□□□ -0.4
LSM12-204ENST00000591247 RBMY1EA6NEQ0 496 aaKnown RBP12.53□□□□□ -0.4
LSM12-204ENST00000591247 RBMY1DP0C7P1 496 aaKnown RBP12.53□□□□□ -0.4
LSM12-204ENST00000591247 ORMDL2Q53FV1 153 aa12.53□□□□□ -0.4
LSM12-204ENST00000591247 CDIP1Q9H305 208 aa12.53□□□□□ -0.4
LSM12-204ENST00000591247 GEMIN7Q9H840 131 aaKnown RBP12.53□□□□□ -0.4
LSM12-204ENST00000591247 TRAV26-1A0A087WT03 109 aa12.52□□□□□ -0.4
LSM12-204ENST00000591247 RAX2Q96IS3 184 aa12.52□□□□□ -0.4
LSM12-204ENST00000591247 YAE1D1Q9NRH1 226 aa12.52□□□□□ -0.4
LSM12-204ENST00000591247 H3BMM0 161 aa12.52□□□□□ -0.41
LSM12-204ENST00000591247 DEFB114Q30KQ6 69 aa12.52□□□□□ -0.41
LSM12-204ENST00000591247 TOMM6Q96B49 74 aa12.52□□□□□ -0.41
LSM12-204ENST00000591247 NEXN-AS1Q8NBZ9 246 aa12.51□□□□□ -0.41
LSM12-204ENST00000591247 SCGB3A1Q96QR1 104 aa12.51□□□□□ -0.41
LSM12-204ENST00000591247 MTORP42345 2549 aa12.51□□□□□ -0.41
LSM12-204ENST00000591247 TRAV2A0A0B4J234 112 aa12.51□□□□□ -0.41
LSM12-204ENST00000591247 TMEM238LA0A1B0GVL6 79 aa12.51□□□□□ -0.41
LSM12-204ENST00000591247 A6NJY4 79 aa12.51□□□□□ -0.41
LSM12-204ENST00000591247 A8MTW9 85 aa12.51□□□□□ -0.41
LSM12-204ENST00000591247 PPP1R17O96001 155 aa12.51□□□□□ -0.41
LSM12-204ENST00000591247 FAM74A4Q5TZK3 123 aa12.51□□□□□ -0.41
LSM12-204ENST00000591247 NFE4Q86UQ8 179 aa12.51□□□□□ -0.41
LSM12-204ENST00000591247 DYNLRB2Q8TF09 96 aa12.51□□□□□ -0.41
LSM12-204ENST00000591247 ZNF418Q8TF45 676 aaPredicted RBP12.51□□□□□ -0.41
LSM12-204ENST00000591247 A0A1W2PRX2 142 aa12.5□□□□□ -0.41
LSM12-204ENST00000591247 F5H697 171 aa12.5□□□□□ -0.41
LSM12-204ENST00000591247 CD28P10747 220 aa12.5□□□□□ -0.41
LSM12-204ENST00000591247 CRYBA4P53673 196 aa12.5□□□□□ -0.41
LSM12-204ENST00000591247 DEFB104AQ8WTQ1 72 aa12.5□□□□□ -0.41
LSM12-204ENST00000591247 MAP6D1Q9H9H5 199 aa12.5□□□□□ -0.41
LSM12-204ENST00000591247 SETD2Q9BYW2 2564 aaPredicted RBP12.5□□□□□ -0.41
LSM12-204ENST00000591247 LINC01549A6NIU2 74 aa12.5□□□□□ -0.41
LSM12-204ENST00000591247 CRYGDP07320 174 aa12.5□□□□□ -0.41
LSM12-204ENST00000591247 SPINK8P0C7L1 97 aa12.5□□□□□ -0.41
LSM12-204ENST00000591247 UBE2D1P51668 147 aa12.49□□□□□ -0.41
LSM12-204ENST00000591247 PRADC1Q9BSG0 188 aa12.49□□□□□ -0.41
LSM12-204ENST00000591247 WNK1Q9H4A3 2382 aa12.49□□□□□ -0.41
LSM12-204ENST00000591247 PRM2P04554 102 aa12.49□□□□□ -0.41
LSM12-204ENST00000591247 POLR2KP53803 58 aaKnown RBP12.49□□□□□ -0.41
LSM12-204ENST00000591247 C2orf66Q6UXQ4 117 aa12.49□□□□□ -0.41
LSM12-204ENST00000591247 PSMB2P49721 201 aa12.48□□□□□ -0.41
LSM12-204ENST00000591247 ZNF815PA8K554 130 aa12.48□□□□□ -0.41
LSM12-204ENST00000591247 HTN1P15515 57 aa12.48□□□□□ -0.41
LSM12-204ENST00000591247 ZNF256Q9Y2P7 627 aaPredicted RBP12.48□□□□□ -0.41
LSM12-204ENST00000591247 LOC107984156A0A0G2JMH3 177 aa12.47□□□□□ -0.41
LSM12-204ENST00000591247 TSPAN13O95857 204 aa12.47□□□□□ -0.41
LSM12-204ENST00000591247 RPL32P62910 135 aaKnown RBP12.47□□□□□ -0.41
LSM12-204ENST00000591247 FHL3Q13643 280 aa12.47□□□□□ -0.41
LSM12-204ENST00000591247 ZNF876PQ49A33 203 aa12.47□□□□□ -0.41
LSM12-204ENST00000591247 ARL17AQ8IVW1 177 aa12.47□□□□□ -0.41
LSM12-204ENST00000591247 TRGV11A0A075B6L2 103 aa12.47□□□□□ -0.41
LSM12-204ENST00000591247 MT-ATP8P03928 68 aa12.47□□□□□ -0.41
LSM12-204ENST00000591247 UBE2D3P61077 147 aa12.47□□□□□ -0.41
LSM12-204ENST00000591247 UBE2D2P62837 147 aa12.47□□□□□ -0.41
LSM12-204ENST00000591247 SRSF9Q13242 221 aaKnown RBP eCLIP12.47□□□□□ -0.41
LSM12-204ENST00000591247 SCGB1D4Q6XE38 83 aa12.47□□□□□ -0.41
LSM12-204ENST00000591247 ZFP2Q6ZN57 461 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms