RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 UBE2G1P62253 170 aa11.86□□□□□ -0.51
H3F3B-209ENST00000589949 SYT8Q8NBV8 401 aa11.86□□□□□ -0.51
H3F3B-209ENST00000589949 CARHSP1Q9Y2V2 147 aaKnown RBP11.86□□□□□ -0.51
H3F3B-209ENST00000589949 PHLDA3Q9Y5J5 127 aa11.86□□□□□ -0.51
H3F3B-209ENST00000589949 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.85□□□□□ -0.51
H3F3B-209ENST00000589949 C11orf52Q96A22 123 aa11.85□□□□□ -0.51
H3F3B-209ENST00000589949 CEBPGP53567 150 aa11.84□□□□□ -0.51
H3F3B-209ENST00000589949 RPL19P84098 196 aaKnown RBP11.84□□□□□ -0.51
H3F3B-209ENST00000589949 FAM74A3Q4VXF1 159 aa11.84□□□□□ -0.51
H3F3B-209ENST00000589949 SCO2A0A1W2PP80 73 aa11.83□□□□□ -0.52
H3F3B-209ENST00000589949 AKR1C3P42330 323 aa11.83□□□□□ -0.52
H3F3B-209ENST00000589949 KLK12Q9UKR0 248 aa11.83□□□□□ -0.52
H3F3B-209ENST00000589949 ZNF727A8MUV8 499 aa11.82□□□□□ -0.52
H3F3B-209ENST00000589949 APOC3P02656 99 aa11.82□□□□□ -0.52
H3F3B-209ENST00000589949 UBE2D3P61077 147 aa11.82□□□□□ -0.52
H3F3B-209ENST00000589949 UBE2D2P62837 147 aa11.82□□□□□ -0.52
H3F3B-209ENST00000589949 ZFP82Q8N141 532 aa11.82□□□□□ -0.52
H3F3B-209ENST00000589949 OR10AG1Q8NH19 301 aa11.82□□□□□ -0.52
H3F3B-209ENST00000589949 SVBPQ8N300 66 aa11.81□□□□□ -0.52
H3F3B-209ENST00000589949 MLST8Q9BVC4 326 aa11.81□□□□□ -0.52
H3F3B-209ENST00000589949 MUC21A0A0G2JKD1 596 aa11.8□□□□□ -0.52
H3F3B-209ENST00000589949 TRBV10-1A0A0K0K1A3 114 aa11.8□□□□□ -0.52
H3F3B-209ENST00000589949 MUC21A0A140T8X8 626 aa11.8□□□□□ -0.52
H3F3B-209ENST00000589949 SMIM7Q9BQ49 75 aa11.8□□□□□ -0.52
H3F3B-209ENST00000589949 TRBV7-3A0A075B6L6 115 aa11.79□□□□□ -0.52
H3F3B-209ENST00000589949 IGKV2D-24A0A075B6R9 120 aa11.79□□□□□ -0.52
H3F3B-209ENST00000589949 TMEM241Q24JQ0 296 aa11.79□□□□□ -0.52
H3F3B-209ENST00000589949 PRR27Q6MZM9 219 aa11.79□□□□□ -0.52
H3F3B-209ENST00000589949 NEXN-AS1Q8NBZ9 246 aa11.79□□□□□ -0.52
H3F3B-209ENST00000589949 OR10G8Q8NGN5 311 aa11.79□□□□□ -0.52
H3F3B-209ENST00000589949 UBE2WQ96B02 151 aa11.79□□□□□ -0.52
H3F3B-209ENST00000589949 NAT8Q9UHE5 227 aa11.79□□□□□ -0.52
H3F3B-209ENST00000589949 URGCP-MRPS24S4R325 110 aa11.79□□□□□ -0.52
H3F3B-209ENST00000589949 SNAPINO95295 136 aa11.78□□□□□ -0.52
H3F3B-209ENST00000589949 S100A9P06702 114 aaKnown RBP11.78□□□□□ -0.52
H3F3B-209ENST00000589949 RPL35P42766 123 aaKnown RBP11.78□□□□□ -0.52
H3F3B-209ENST00000589949 RPL36AP83881 106 aaKnown RBP11.78□□□□□ -0.52
H3F3B-209ENST00000589949 ATRAIDQ6UW56 229 aa11.78□□□□□ -0.52
H3F3B-209ENST00000589949 RPL36ALQ969Q0 106 aaKnown RBP11.78□□□□□ -0.52
H3F3B-209ENST00000589949 DERL1Q9BUN8 251 aa11.78□□□□□ -0.52
H3F3B-209ENST00000589949 SSBP4Q9BWG4 385 aaPredicted RBP11.78□□□□□ -0.52
H3F3B-209ENST00000589949 SNAI2O43623 268 aa11.77□□□□□ -0.53
H3F3B-209ENST00000589949 RAB4BP61018 213 aa11.77□□□□□ -0.53
H3F3B-209ENST00000589949 PNRC1Q12796 327 aaPredicted RBP11.77□□□□□ -0.53
H3F3B-209ENST00000589949 ENHOQ6UWT2 76 aa11.77□□□□□ -0.53
H3F3B-209ENST00000589949 SCXQ7RTU7 201 aa11.77□□□□□ -0.53
H3F3B-209ENST00000589949 BAGE2Q86Y30 109 aa11.77□□□□□ -0.53
H3F3B-209ENST00000589949 LINC00528Q8N1L1 170 aa11.77□□□□□ -0.53
H3F3B-209ENST00000589949 CLRN3Q8NCR9 226 aa11.77□□□□□ -0.53
H3F3B-209ENST00000589949 COX11Q9Y6N1 276 aa11.77□□□□□ -0.53
H3F3B-209ENST00000589949 A0A087WX48 190 aa11.76□□□□□ -0.53
H3F3B-209ENST00000589949 TRBV6-8A0A0A6YYG3 113 aa11.76□□□□□ -0.53
H3F3B-209ENST00000589949 RMI2Q96E14 147 aa11.76□□□□□ -0.53
H3F3B-209ENST00000589949 CXCL1P09341 107 aa11.75□□□□□ -0.53
H3F3B-209ENST00000589949 SSTP61278 116 aa11.75□□□□□ -0.53
H3F3B-209ENST00000589949 ZNF56Q15929 161 aa11.75□□□□□ -0.53
H3F3B-209ENST00000589949 MPV17L2Q567V2 206 aa11.75□□□□□ -0.53
H3F3B-209ENST00000589949 NTM-AS1Q6ZSK4 140 aa11.75□□□□□ -0.53
H3F3B-209ENST00000589949 Q8N976 141 aa11.75□□□□□ -0.53
H3F3B-209ENST00000589949 CHCHD7Q9BUK0 85 aa11.75□□□□□ -0.53
H3F3B-209ENST00000589949 KIF25-AS1Q9Y6Z4 181 aa11.75□□□□□ -0.53
H3F3B-209ENST00000589949 TRBV20OR9-2A0A075B6H5 130 aa11.74□□□□□ -0.53
H3F3B-209ENST00000589949 OR5AL1P0C617 328 aa11.74□□□□□ -0.53
H3F3B-209ENST00000589949 GNG4P50150 75 aa11.74□□□□□ -0.53
H3F3B-209ENST00000589949 KRTAP10-4P60372 401 aaPredicted RBP11.74□□□□□ -0.53
H3F3B-209ENST00000589949 RPL23P62829 140 aaKnown RBP11.74□□□□□ -0.53
H3F3B-209ENST00000589949 TMEM262E9PQX1 116 aa11.73□□□□□ -0.53
H3F3B-209ENST00000589949 CENPWQ5EE01 88 aa11.73□□□□□ -0.53
H3F3B-209ENST00000589949 C15orf54Q8N8G6 183 aa11.73□□□□□ -0.53
H3F3B-209ENST00000589949 OCC1Q8TAD7 63 aa11.73□□□□□ -0.53
H3F3B-209ENST00000589949 PLA2G1BP04054 148 aaKnown RBP11.72□□□□□ -0.53
H3F3B-209ENST00000589949 ELOBQ15370 118 aa11.72□□□□□ -0.53
H3F3B-209ENST00000589949 RHEBQ15382 184 aa11.72□□□□□ -0.53
H3F3B-209ENST00000589949 LINC01551Q86U37 167 aa11.72□□□□□ -0.53
H3F3B-209ENST00000589949 SMIM12Q96EX1 92 aa11.72□□□□□ -0.53
H3F3B-209ENST00000589949 C7orf77A4D0Y5 90 aa11.71□□□□□ -0.53
H3F3B-209ENST00000589949 GZMBP10144 247 aa11.71□□□□□ -0.53
H3F3B-209ENST00000589949 ADIRFQ15847 76 aa11.71□□□□□ -0.53
H3F3B-209ENST00000589949 SPANXN1Q5VSR9 72 aa11.71□□□□□ -0.53
H3F3B-209ENST00000589949 CHAC1Q9BUX1 264 aa11.71□□□□□ -0.53
H3F3B-209ENST00000589949 IGLV2-8P01709 118 aa11.7□□□□□ -0.54
H3F3B-209ENST00000589949 Q0VG73 95 aa11.7□□□□□ -0.54
H3F3B-209ENST00000589949 CIRBP-AS1Q8TBR5 109 aa11.7□□□□□ -0.54
H3F3B-209ENST00000589949 F5H697 171 aa11.69□□□□□ -0.54
H3F3B-209ENST00000589949 ANGP03950 147 aaKnown RBP11.69□□□□□ -0.54
H3F3B-209ENST00000589949 KRTAP26-1Q6PEX3 210 aa11.69□□□□□ -0.54
H3F3B-209ENST00000589949 KCNIP4Q6PIL6 250 aa11.69□□□□□ -0.54
H3F3B-209ENST00000589949 ISOC2Q96AB3 205 aa11.69□□□□□ -0.54
H3F3B-209ENST00000589949 C1orf43Q9BWL3 253 aa11.69□□□□□ -0.54
H3F3B-209ENST00000589949 RPS10P5Q9NQ39 176 aa11.69□□□□□ -0.54
H3F3B-209ENST00000589949 CHCHD5Q9BSY4 110 aa11.68□□□□□ -0.54
H3F3B-209ENST00000589949 BIN3Q9NQY0 253 aa11.68□□□□□ -0.54
H3F3B-209ENST00000589949 USP17L23D6RBM5 183 aa11.67□□□□□ -0.54
H3F3B-209ENST00000589949 J3QL48 77 aa11.67□□□□□ -0.54
H3F3B-209ENST00000589949 K7EN84 100 aa11.67□□□□□ -0.54
H3F3B-209ENST00000589949 MT-ND4LP03901 98 aa11.67□□□□□ -0.54
H3F3B-209ENST00000589949 IGLC6P0CF74 106 aa11.67□□□□□ -0.54
H3F3B-209ENST00000589949 ANAPC16Q96DE5 110 aa11.67□□□□□ -0.54
H3F3B-209ENST00000589949 CTDSP1Q9GZU7 261 aa11.67□□□□□ -0.54
H3F3B-209ENST00000589949 LRP1Q07954 4544 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms