RNA–Protein interactions for RNA: ENST00000589162.1

CAPNS1-208, Transcript of calpain small subunit 1, humanhuman

TSL 3

Gene CAPNS1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-208ENST00000589162 GAGE1Q13065 139 aa4.23□□□□□ -1.73
CAPNS1-208ENST00000589162 GAGE4Q13068 117 aa4.23□□□□□ -1.73
CAPNS1-208ENST00000589162 GAGE5Q13069 117 aa4.23□□□□□ -1.73
CAPNS1-208ENST00000589162 IQCJQ1A5X6 159 aa4.23□□□□□ -1.73
CAPNS1-208ENST00000589162 LGALS9BQ3B8N2 356 aa4.23□□□□□ -1.73
CAPNS1-208ENST00000589162 GAGE13Q4V321 117 aa4.23□□□□□ -1.73
CAPNS1-208ENST00000589162 ZFAND6Q6FIF0 208 aa4.23□□□□□ -1.73
CAPNS1-208ENST00000589162 WDR73Q6P4I2 378 aa4.23□□□□□ -1.73
CAPNS1-208ENST00000589162 GATD1Q8NB37 220 aa4.23□□□□□ -1.73
CAPNS1-208ENST00000589162 FRZBQ92765 325 aa4.23□□□□□ -1.73
CAPNS1-208ENST00000589162 TMEM191AQ9H0A3 160 aa4.23□□□□□ -1.73
CAPNS1-208ENST00000589162 DPH3P1Q9H4G8 78 aa4.23□□□□□ -1.73
CAPNS1-208ENST00000589162 NOTCH1P46531 2555 aa4.23□□□□□ -1.73
CAPNS1-208ENST00000589162 IGHV3-38A0A0C4DH36 116 aa4.22□□□□□ -1.73
CAPNS1-208ENST00000589162 A8MWV9 139 aa4.22□□□□□ -1.73
CAPNS1-208ENST00000589162 D6R8Y8 96 aa4.22□□□□□ -1.73
CAPNS1-208ENST00000589162 NPYP01303 97 aa4.22□□□□□ -1.73
CAPNS1-208ENST00000589162 TRGC2P03986 189 aa4.22□□□□□ -1.73
CAPNS1-208ENST00000589162 ATP5G1P05496 136 aa4.22□□□□□ -1.73
CAPNS1-208ENST00000589162 NHLRC4P0CG21 123 aaPredicted RBP4.22□□□□□ -1.73
CAPNS1-208ENST00000589162 SMIM17P0DL12 118 aa4.22□□□□□ -1.73
CAPNS1-208ENST00000589162 FAM104BQ5XKR9 115 aa4.22□□□□□ -1.73
CAPNS1-208ENST00000589162 PHLDA1Q8WV24 401 aaPredicted RBP4.22□□□□□ -1.73
CAPNS1-208ENST00000589162 PTH2Q96A98 100 aa4.22□□□□□ -1.73
CAPNS1-208ENST00000589162 VSIG2Q96IQ7 327 aa4.22□□□□□ -1.73
CAPNS1-208ENST00000589162 TRAPPC1Q9Y5R8 145 aa4.22□□□□□ -1.73
CAPNS1-208ENST00000589162 HUWE1Q7Z6Z7 4374 aaKnown RBP4.21□□□□□ -1.73
CAPNS1-208ENST00000589162 TRAV9-1A0A075B6T8 112 aa4.21□□□□□ -1.74
CAPNS1-208ENST00000589162 TRAV26-1A0A087WT03 109 aa4.21□□□□□ -1.74
CAPNS1-208ENST00000589162 DEFB131BA0A096LNP1 70 aa4.21□□□□□ -1.74
CAPNS1-208ENST00000589162 LOC389332A0A1B0GUA5 103 aa4.21□□□□□ -1.74
CAPNS1-208ENST00000589162 M0QY20 66 aa4.21□□□□□ -1.74
CAPNS1-208ENST00000589162 APCSP02743 223 aa4.21□□□□□ -1.74
CAPNS1-208ENST00000589162 CRYBA4P53673 196 aa4.21□□□□□ -1.74
CAPNS1-208ENST00000589162 SMIM15Q7Z3B0 74 aa4.21□□□□□ -1.74
CAPNS1-208ENST00000589162 ATP5L2Q7Z4Y8 100 aa4.21□□□□□ -1.74
CAPNS1-208ENST00000589162 SLC25A29Q8N8R3 303 aa4.21□□□□□ -1.74
CAPNS1-208ENST00000589162 NRACQ8N912 160 aa4.21□□□□□ -1.74
CAPNS1-208ENST00000589162 NEXN-AS1Q8NBZ9 246 aa4.21□□□□□ -1.74
CAPNS1-208ENST00000589162 GNB1LQ9BYB4 327 aa4.21□□□□□ -1.74
CAPNS1-208ENST00000589162 K7EQD1 137 aa4.2□□□□□ -1.74
CAPNS1-208ENST00000589162 PHOX2AO14813 284 aa4.2□□□□□ -1.74
CAPNS1-208ENST00000589162 HLA-DQA1P01909 254 aa4.2□□□□□ -1.74
CAPNS1-208ENST00000589162 PLA2G1BP04054 148 aaKnown RBP4.2□□□□□ -1.74
CAPNS1-208ENST00000589162 GYPEP15421 78 aa4.2□□□□□ -1.74
CAPNS1-208ENST00000589162 SRIP30626 198 aa4.2□□□□□ -1.74
CAPNS1-208ENST00000589162 CKS2P33552 79 aa4.2□□□□□ -1.74
CAPNS1-208ENST00000589162 OR10J3Q5JRS4 329 aa4.2□□□□□ -1.74
CAPNS1-208ENST00000589162 ZNRF2Q8NHG8 242 aa4.2□□□□□ -1.74
CAPNS1-208ENST00000589162 HHLA3Q9XRX5 114 aa4.2□□□□□ -1.74
CAPNS1-208ENST00000589162 TENM3Q9P273 2699 aa4.2□□□□□ -1.74
CAPNS1-208ENST00000589162 DNAH9Q9NYC9 4486 aa4.2□□□□□ -1.74
CAPNS1-208ENST00000589162 TRAV10A0A0B4J240 114 aa4.19□□□□□ -1.74
CAPNS1-208ENST00000589162 A0A1B0GW15 77 aa4.19□□□□□ -1.74
CAPNS1-208ENST00000589162 PRSS47A8MTI9 375 aa4.19□□□□□ -1.74
CAPNS1-208ENST00000589162 IGLL5B9A064 214 aa4.19□□□□□ -1.74
CAPNS1-208ENST00000589162 RHODO00212 210 aa4.19□□□□□ -1.74
CAPNS1-208ENST00000589162 TNFRSF6BO95407 300 aa4.19□□□□□ -1.74
CAPNS1-208ENST00000589162 NUDT3O95989 172 aa4.19□□□□□ -1.74
CAPNS1-208ENST00000589162 S100A8P05109 93 aa4.19□□□□□ -1.74
CAPNS1-208ENST00000589162 PIK3CD-AS1Q5SR53 167 aa4.19□□□□□ -1.74
CAPNS1-208ENST00000589162 RASL11AQ6T310 242 aa4.19□□□□□ -1.74
CAPNS1-208ENST00000589162 ZFP2Q6ZN57 461 aa4.19□□□□□ -1.74
CAPNS1-208ENST00000589162 PRELID3AQ96N28 172 aa4.19□□□□□ -1.74
CAPNS1-208ENST00000589162 C18orf15Q96N68 181 aa4.19□□□□□ -1.74
CAPNS1-208ENST00000589162 ALKBH7Q9BT30 221 aaPredicted RBP4.19□□□□□ -1.74
CAPNS1-208ENST00000589162 TNFRSF18Q9Y5U5 241 aa4.19□□□□□ -1.74
CAPNS1-208ENST00000589162 TEX48A0A1B0GUV7 120 aa4.18□□□□□ -1.74
CAPNS1-208ENST00000589162 TCAPO15273 167 aa4.18□□□□□ -1.74
CAPNS1-208ENST00000589162 RHOHQ15669 191 aa4.18□□□□□ -1.74
CAPNS1-208ENST00000589162 ORMDL3Q8N138 153 aa4.18□□□□□ -1.74
CAPNS1-208ENST00000589162 MRAP2Q96G30 205 aa4.18□□□□□ -1.74
CAPNS1-208ENST00000589162 URB1-AS1Q96HZ7 61 aa4.18□□□□□ -1.74
CAPNS1-208ENST00000589162 NDUFAF3Q9BU61 184 aa4.18□□□□□ -1.74
CAPNS1-208ENST00000589162 NIT2Q9NQR4 276 aa4.18□□□□□ -1.74
CAPNS1-208ENST00000589162 PRO0255Q9UI72 69 aa4.18□□□□□ -1.74
CAPNS1-208ENST00000589162 NBEAL1Q6ZS30 2694 aa4.18□□□□□ -1.74
CAPNS1-208ENST00000589162 TRBV6-4A0A1B0GX49 114 aa4.17□□□□□ -1.74
CAPNS1-208ENST00000589162 SDHAF1A6NFY7 115 aa4.17□□□□□ -1.74
CAPNS1-208ENST00000589162 NUPR1O60356 82 aa4.17□□□□□ -1.74
CAPNS1-208ENST00000589162 MT-ND6P03923 174 aa4.17□□□□□ -1.74
CAPNS1-208ENST00000589162 LINC00694P0DN24 101 aa4.17□□□□□ -1.74
CAPNS1-208ENST00000589162 IFI27P40305 119 aaPredicted RBP4.17□□□□□ -1.74
CAPNS1-208ENST00000589162 UBE2D3P61077 147 aa4.17□□□□□ -1.74
CAPNS1-208ENST00000589162 UBE2D2P62837 147 aa4.17□□□□□ -1.74
CAPNS1-208ENST00000589162 PMCHL1Q16048 86 aa4.17□□□□□ -1.74
CAPNS1-208ENST00000589162 COX19Q49B96 90 aa4.17□□□□□ -1.74
CAPNS1-208ENST00000589162 CEMP1Q6PRD7 247 aaPredicted RBP4.17□□□□□ -1.74
CAPNS1-208ENST00000589162 NTM-AS1Q6ZSK4 140 aa4.17□□□□□ -1.74
CAPNS1-208ENST00000589162 C18orf32Q8TCD1 76 aa4.17□□□□□ -1.74
CAPNS1-208ENST00000589162 PRADC1Q9BSG0 188 aa4.17□□□□□ -1.74
CAPNS1-208ENST00000589162 TMEM70Q9BUB7 260 aa4.17□□□□□ -1.74
CAPNS1-208ENST00000589162 ST20Q9HBF5 79 aa4.17□□□□□ -1.74
CAPNS1-208ENST00000589162 NBEAL2Q6ZNJ1 2754 aa4.16□□□□□ -1.74
CAPNS1-208ENST00000589162 MEGF8Q7Z7M0 2845 aa4.16□□□□□ -1.74
CAPNS1-208ENST00000589162 IGLV2-18A0A075B6J9 118 aa4.16□□□□□ -1.74
CAPNS1-208ENST00000589162 C1orf196B1AJZ1 125 aa4.16□□□□□ -1.74
CAPNS1-208ENST00000589162 HIST1H2BKO60814 126 aa4.16□□□□□ -1.74
CAPNS1-208ENST00000589162 TSHBP01222 138 aa4.16□□□□□ -1.74
CAPNS1-208ENST00000589162 HIST1H2BJP06899 126 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 155.8 ms