RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 PCP4L1A6NKN8 68 aa10.24□□□□□ -0.77
NPC1-207ENST00000588867 F5H768 121 aa10.24□□□□□ -0.77
NPC1-207ENST00000588867 NRACQ8N912 160 aa10.24□□□□□ -0.77
NPC1-207ENST00000588867 LOC389332A0A1B0GUA5 103 aa10.23□□□□□ -0.77
NPC1-207ENST00000588867 IQCJQ1A5X6 159 aa10.23□□□□□ -0.77
NPC1-207ENST00000588867 Q6ZTC4 211 aa10.23□□□□□ -0.77
NPC1-207ENST00000588867 Q9UF83 564 aa10.23□□□□□ -0.77
NPC1-207ENST00000588867 PPP1R17O96001 155 aa10.23□□□□□ -0.77
NPC1-207ENST00000588867 NIT2Q9NQR4 276 aa10.23□□□□□ -0.77
NPC1-207ENST00000588867 K7EQD1 137 aa10.22□□□□□ -0.77
NPC1-207ENST00000588867 C18orf32Q8TCD1 76 aa10.22□□□□□ -0.77
NPC1-207ENST00000588867 LAMTOR2Q9Y2Q5 125 aa10.22□□□□□ -0.77
NPC1-207ENST00000588867 TRBV6-4A0A1B0GX49 114 aa10.21□□□□□ -0.77
NPC1-207ENST00000588867 MAP1LC3AQ9H492 121 aa10.21□□□□□ -0.77
NPC1-207ENST00000588867 ST20Q9HBF5 79 aa10.21□□□□□ -0.77
NPC1-207ENST00000588867 TNFRSF18Q9Y5U5 241 aa10.21□□□□□ -0.77
NPC1-207ENST00000588867 NDUFA6P56556 154 aa10.21□□□□□ -0.78
NPC1-207ENST00000588867 BAGE3Q86Y29 109 aa10.21□□□□□ -0.78
NPC1-207ENST00000588867 NEXN-AS1Q8NBZ9 246 aa10.21□□□□□ -0.78
NPC1-207ENST00000588867 PRADC1Q9BSG0 188 aa10.21□□□□□ -0.78
NPC1-207ENST00000588867 EDA2RQ9HAV5 297 aa10.21□□□□□ -0.78
NPC1-207ENST00000588867 PRO0255Q9UI72 69 aa10.21□□□□□ -0.78
NPC1-207ENST00000588867 COL7A1Q02388 2944 aa10.2□□□□□ -0.78
NPC1-207ENST00000588867 A0A0J9YY99 117 aa10.2□□□□□ -0.78
NPC1-207ENST00000588867 LOC100131303A0A0U1RQF7 123 aa10.2□□□□□ -0.78
NPC1-207ENST00000588867 CRYBA4P53673 196 aa10.2□□□□□ -0.78
NPC1-207ENST00000588867 SUMO2P61956 95 aaKnown RBP10.2□□□□□ -0.78
NPC1-207ENST00000588867 RHOHQ15669 191 aa10.2□□□□□ -0.78
NPC1-207ENST00000588867 ZNRF2Q8NHG8 242 aa10.2□□□□□ -0.78
NPC1-207ENST00000588867 PRSS3P2Q8NHM4 247 aa10.2□□□□□ -0.78
NPC1-207ENST00000588867 PAX4O43316 350 aa10.19□□□□□ -0.78
NPC1-207ENST00000588867 C20orf78Q9BR46 151 aa10.19□□□□□ -0.78
NPC1-207ENST00000588867 TRAV26-1A0A087WT03 109 aa10.19□□□□□ -0.78
NPC1-207ENST00000588867 TRBV10-1A0A0K0K1A3 114 aa10.19□□□□□ -0.78
NPC1-207ENST00000588867 GAGE12JA6NER3 117 aa10.19□□□□□ -0.78
NPC1-207ENST00000588867 IFI27P40305 119 aaPredicted RBP10.19□□□□□ -0.78
NPC1-207ENST00000588867 Q0VG73 95 aa10.19□□□□□ -0.78
NPC1-207ENST00000588867 GAGE1Q13065 139 aa10.19□□□□□ -0.78
NPC1-207ENST00000588867 GAGE4Q13068 117 aa10.19□□□□□ -0.78
NPC1-207ENST00000588867 GAGE5Q13069 117 aa10.19□□□□□ -0.78
NPC1-207ENST00000588867 GAGE13Q4V321 117 aa10.19□□□□□ -0.78
NPC1-207ENST00000588867 HUWE1Q7Z6Z7 4374 aaKnown RBP10.18□□□□□ -0.78
NPC1-207ENST00000588867 DEFB131BA0A096LNP1 70 aa10.18□□□□□ -0.78
NPC1-207ENST00000588867 TRBV6-5A0A0K0K1A5 114 aa10.18□□□□□ -0.78
NPC1-207ENST00000588867 SDHAF1A6NFY7 115 aa10.18□□□□□ -0.78
NPC1-207ENST00000588867 RPL36AP83881 106 aaKnown RBP10.18□□□□□ -0.78
NPC1-207ENST00000588867 DEFB104AQ8WTQ1 72 aa10.18□□□□□ -0.78
NPC1-207ENST00000588867 RPL36ALQ969Q0 106 aaKnown RBP10.18□□□□□ -0.78
NPC1-207ENST00000588867 DNAJC30Q96LL9 226 aa10.18□□□□□ -0.78
NPC1-207ENST00000588867 TRBV7-3A0A075B6L6 115 aa10.17□□□□□ -0.78
NPC1-207ENST00000588867 S100A6P06703 90 aa10.17□□□□□ -0.78
NPC1-207ENST00000588867 GYPEP15421 78 aa10.17□□□□□ -0.78
NPC1-207ENST00000588867 NEGR1Q7Z3B1 354 aa10.17□□□□□ -0.78
NPC1-207ENST00000588867 NIT1Q86X76 327 aa10.17□□□□□ -0.78
NPC1-207ENST00000588867 TMEM70Q9BUB7 260 aa10.17□□□□□ -0.78
NPC1-207ENST00000588867 RNASEKQ6P5S7 137 aaKnown RBP10.17□□□□□ -0.78
NPC1-207ENST00000588867 VSIG2Q96IQ7 327 aa10.17□□□□□ -0.78
NPC1-207ENST00000588867 DNAH9Q9NYC9 4486 aa10.16□□□□□ -0.78
NPC1-207ENST00000588867 PMCHP20382 165 aa10.16□□□□□ -0.78
NPC1-207ENST00000588867 POLR2KP53803 58 aaKnown RBP10.16□□□□□ -0.78
NPC1-207ENST00000588867 PHLDA1Q8WV24 401 aaPredicted RBP10.16□□□□□ -0.78
NPC1-207ENST00000588867 SMIM2Q9BVW6 85 aa10.16□□□□□ -0.78
NPC1-207ENST00000588867 TRAV10A0A0B4J240 114 aa10.16□□□□□ -0.78
NPC1-207ENST00000588867 IGHV3-38A0A0C4DH36 116 aa10.16□□□□□ -0.78
NPC1-207ENST00000588867 PRSS47A8MTI9 375 aa10.16□□□□□ -0.78
NPC1-207ENST00000588867 VCYO14598 125 aa10.16□□□□□ -0.78
NPC1-207ENST00000588867 FA2HQ7L5A8 372 aa10.16□□□□□ -0.78
NPC1-207ENST00000588867 NXT2Q9NPJ8 142 aaKnown RBP10.16□□□□□ -0.78
NPC1-207ENST00000588867 SERF1AO75920 110 aa10.15□□□□□ -0.78
NPC1-207ENST00000588867 LINC00614P0C842 121 aa10.15□□□□□ -0.78
NPC1-207ENST00000588867 Q8N8P6 123 aa10.15□□□□□ -0.78
NPC1-207ENST00000588867 C12orf57Q99622 126 aa10.15□□□□□ -0.78
NPC1-207ENST00000588867 PRKDCP78527 4128 aaKnown RBP10.15□□□□□ -0.79
NPC1-207ENST00000588867 TCAPO15273 167 aa10.14□□□□□ -0.79
NPC1-207ENST00000588867 URB1-AS1Q96HZ7 61 aa10.14□□□□□ -0.79
NPC1-207ENST00000588867 IGLV2-18A0A075B6J9 118 aa10.14□□□□□ -0.79
NPC1-207ENST00000588867 A0A096LPF7 62 aa10.14□□□□□ -0.79
NPC1-207ENST00000588867 I3L3M4 83 aa10.14□□□□□ -0.79
NPC1-207ENST00000588867 NUPR1O60356 82 aa10.14□□□□□ -0.79
NPC1-207ENST00000588867 UBE2D3P61077 147 aa10.14□□□□□ -0.79
NPC1-207ENST00000588867 UBE2D2P62837 147 aa10.14□□□□□ -0.79
NPC1-207ENST00000588867 LINC00469Q8N7U9 141 aa10.14□□□□□ -0.79
NPC1-207ENST00000588867 KIR2DL4Q99706 377 aa10.14□□□□□ -0.79
NPC1-207ENST00000588867 TRBV27A0A0K0K1C4 114 aa10.13□□□□□ -0.79
NPC1-207ENST00000588867 AKR1D1P51857 326 aa10.13□□□□□ -0.79
NPC1-207ENST00000588867 SNRPEP62304 92 aaKnown RBP10.13□□□□□ -0.79
NPC1-207ENST00000588867 LINC00310P59036 64 aa10.12□□□□□ -0.79
NPC1-207ENST00000588867 RPL32P62910 135 aaKnown RBP10.12□□□□□ -0.79
NPC1-207ENST00000588867 AP5S1Q9NUS5 200 aa10.12□□□□□ -0.79
NPC1-207ENST00000588867 STAB2Q8WWQ8 2551 aa10.12□□□□□ -0.79
NPC1-207ENST00000588867 HSBP1O75506 76 aa10.12□□□□□ -0.79
NPC1-207ENST00000588867 FCER1GP30273 86 aa10.12□□□□□ -0.79
NPC1-207ENST00000588867 DAZ4Q86SG3 579 aaKnown RBP10.12□□□□□ -0.79
NPC1-207ENST00000588867 CHCHD1Q96BP2 118 aaKnown RBP10.12□□□□□ -0.79
NPC1-207ENST00000588867 DAZ3Q9NR90 486 aaKnown RBP10.12□□□□□ -0.79
NPC1-207ENST00000588867 FBN3Q75N90 2809 aa10.12□□□□□ -0.79
NPC1-207ENST00000588867 NUDT3O95989 172 aa10.11□□□□□ -0.79
NPC1-207ENST00000588867 MRPL23Q16540 153 aaKnown RBP10.11□□□□□ -0.79
NPC1-207ENST00000588867 PDZD11Q5EBL8 140 aa10.11□□□□□ -0.79
NPC1-207ENST00000588867 COA6Q5JTJ3 125 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms