RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 NXT2Q9NPJ8 142 aaKnown RBP18.52■□□□□ 0.55
SCAMP4-210ENST00000588555 TRBV6-5A0A0K0K1A5 114 aa18.51■□□□□ 0.55
SCAMP4-210ENST00000588555 LINC01546A6NGU7 62 aa18.51■□□□□ 0.55
SCAMP4-210ENST00000588555 LYRM9A8MSI8 78 aa18.51■□□□□ 0.55
SCAMP4-210ENST00000588555 Q8N8P6 123 aa18.51■□□□□ 0.55
SCAMP4-210ENST00000588555 TMEM18Q96B42 140 aa18.51■□□□□ 0.55
SCAMP4-210ENST00000588555 C18orf15Q96N68 181 aa18.51■□□□□ 0.55
SCAMP4-210ENST00000588555 SMIM2Q9BVW6 85 aa18.51■□□□□ 0.55
SCAMP4-210ENST00000588555 TENM3Q9P273 2699 aa18.51■□□□□ 0.55
SCAMP4-210ENST00000588555 PMCHP20382 165 aa18.5■□□□□ 0.55
SCAMP4-210ENST00000588555 FAM222AQ5U5X8 452 aa18.5■□□□□ 0.55
SCAMP4-210ENST00000588555 H7C1H1 209 aa18.5■□□□□ 0.55
SCAMP4-210ENST00000588555 PACRGQ96M98 296 aaPredicted RBP18.5■□□□□ 0.55
SCAMP4-210ENST00000588555 NIT2Q9NQR4 276 aa18.5■□□□□ 0.55
SCAMP4-210ENST00000588555 DKK2Q9UBU2 259 aa18.5■□□□□ 0.55
SCAMP4-210ENST00000588555 P0DMU3 169 aa18.49■□□□□ 0.55
SCAMP4-210ENST00000588555 FAM231AP0DMU4 169 aa18.49■□□□□ 0.55
SCAMP4-210ENST00000588555 FAM231CP0DMU5 169 aa18.49■□□□□ 0.55
SCAMP4-210ENST00000588555 AMTP48728 403 aa18.49■□□□□ 0.55
SCAMP4-210ENST00000588555 SBSPONQ8IVN8 264 aa18.49■□□□□ 0.55
SCAMP4-210ENST00000588555 ST20Q9HBF5 79 aa18.49■□□□□ 0.55
SCAMP4-210ENST00000588555 IGHV1-24A0A0C4DH33 117 aa18.48■□□□□ 0.55
SCAMP4-210ENST00000588555 POLR2KP53803 58 aaKnown RBP18.48■□□□□ 0.55
SCAMP4-210ENST00000588555 RPL32P62910 135 aaKnown RBP18.48■□□□□ 0.55
SCAMP4-210ENST00000588555 PMCHL1Q16048 86 aa18.48■□□□□ 0.55
SCAMP4-210ENST00000588555 DEFB130BP0DP73 79 aa18.47■□□□□ 0.55
SCAMP4-210ENST00000588555 DEFB130AP0DP74 79 aa18.47■□□□□ 0.55
SCAMP4-210ENST00000588555 TMEM70Q9BUB7 260 aa18.47■□□□□ 0.55
SCAMP4-210ENST00000588555 Q9UF83 564 aa18.47■□□□□ 0.55
SCAMP4-210ENST00000588555 CIDEAO60543 219 aa18.47■□□□□ 0.55
SCAMP4-210ENST00000588555 SDHAF1A6NFY7 115 aa18.45■□□□□ 0.54
SCAMP4-210ENST00000588555 AKR1D1P51857 326 aa18.45■□□□□ 0.54
SCAMP4-210ENST00000588555 CELA1Q9UNI1 258 aa18.45■□□□□ 0.54
SCAMP4-210ENST00000588555 A0A096LNJ9 63 aa18.45■□□□□ 0.54
SCAMP4-210ENST00000588555 OR10D4PQ8NGN7 298 aa18.45■□□□□ 0.54
SCAMP4-210ENST00000588555 DEFB121Q5J5C9 76 aa18.44■□□□□ 0.54
SCAMP4-210ENST00000588555 NEXN-AS1Q8NBZ9 246 aa18.43■□□□□ 0.54
SCAMP4-210ENST00000588555 TRBV27A0A0K0K1C4 114 aa18.42■□□□□ 0.54
SCAMP4-210ENST00000588555 FHL2Q14192 279 aa18.42■□□□□ 0.54
SCAMP4-210ENST00000588555 NEGR1Q7Z3B1 354 aa18.42■□□□□ 0.54
SCAMP4-210ENST00000588555 TCAPO15273 167 aa18.42■□□□□ 0.54
SCAMP4-210ENST00000588555 SLC25A29Q8N8R3 303 aa18.42■□□□□ 0.54
SCAMP4-210ENST00000588555 K7EQD1 137 aa18.41■□□□□ 0.54
SCAMP4-210ENST00000588555 TM2D3Q9BRN9 247 aa18.41■□□□□ 0.54
SCAMP4-210ENST00000588555 VCYO14598 125 aa18.4■□□□□ 0.54
SCAMP4-210ENST00000588555 SPART-AS1P0CW21 52 aa18.4■□□□□ 0.54
SCAMP4-210ENST00000588555 LAGE3Q14657 143 aa18.4■□□□□ 0.54
SCAMP4-210ENST00000588555 DNAJC30Q96LL9 226 aa18.4■□□□□ 0.54
SCAMP4-210ENST00000588555 TRBV6-4A0A1B0GX49 114 aa18.39■□□□□ 0.53
SCAMP4-210ENST00000588555 K7EMI3 77 aa18.39■□□□□ 0.53
SCAMP4-210ENST00000588555 C11orf68Q9H3H3 251 aaKnown RBP18.39■□□□□ 0.53
SCAMP4-210ENST00000588555 TRGV4A0A0C4DH28 118 aa18.38■□□□□ 0.53
SCAMP4-210ENST00000588555 TRBV10-1A0A0K0K1A3 114 aa18.38■□□□□ 0.53
SCAMP4-210ENST00000588555 SPATA25Q9BR10 227 aa18.38■□□□□ 0.53
SCAMP4-210ENST00000588555 TNFRSF18Q9Y5U5 241 aa18.38■□□□□ 0.53
SCAMP4-210ENST00000588555 DAD1P61803 113 aa18.37■□□□□ 0.53
SCAMP4-210ENST00000588555 MRAPQ8TCY5 172 aa18.37■□□□□ 0.53
SCAMP4-210ENST00000588555 HUWE1Q7Z6Z7 4374 aaKnown RBP18.37■□□□□ 0.53
SCAMP4-210ENST00000588555 HBDP02042 147 aa18.37■□□□□ 0.53
SCAMP4-210ENST00000588555 FCER1GP30273 86 aa18.37■□□□□ 0.53
SCAMP4-210ENST00000588555 TEX48A0A1B0GUV7 120 aa18.35■□□□□ 0.53
SCAMP4-210ENST00000588555 LEPROTL1O95214 131 aa18.35■□□□□ 0.53
SCAMP4-210ENST00000588555 ORMDL2Q53FV1 153 aa18.35■□□□□ 0.53
SCAMP4-210ENST00000588555 KIR2DL4Q99706 377 aa18.35■□□□□ 0.53
SCAMP4-210ENST00000588555 LINC00173Q6ZV60 143 aa18.35■□□□□ 0.53
SCAMP4-210ENST00000588555 TRBV7-3A0A075B6L6 115 aa18.34■□□□□ 0.53
SCAMP4-210ENST00000588555 I3L3M4 83 aa18.34■□□□□ 0.53
SCAMP4-210ENST00000588555 DEFB104AQ8WTQ1 72 aa18.34■□□□□ 0.53
SCAMP4-210ENST00000588555 TSHBP01222 138 aa18.33■□□□□ 0.53
SCAMP4-210ENST00000588555 RHOHQ15669 191 aa18.33■□□□□ 0.53
SCAMP4-210ENST00000588555 ZNRF2Q8NHG8 242 aa18.33■□□□□ 0.53
SCAMP4-210ENST00000588555 HHLA3Q9XRX5 114 aa18.32■□□□□ 0.52
SCAMP4-210ENST00000588555 RPL36AP83881 106 aaKnown RBP18.32■□□□□ 0.52
SCAMP4-210ENST00000588555 RPL36ALQ969Q0 106 aaKnown RBP18.32■□□□□ 0.52
SCAMP4-210ENST00000588555 DNAH9Q9NYC9 4486 aa18.31■□□□□ 0.52
SCAMP4-210ENST00000588555 NUDT3O95989 172 aa18.31■□□□□ 0.52
SCAMP4-210ENST00000588555 PYY3Q5JQD4 70 aa18.31■□□□□ 0.52
SCAMP4-210ENST00000588555 A0A0J9YWU9 116 aa18.3■□□□□ 0.52
SCAMP4-210ENST00000588555 LOC100131303A0A0U1RQF7 123 aa18.3■□□□□ 0.52
SCAMP4-210ENST00000588555 ATP5G1P05496 136 aa18.3■□□□□ 0.52
SCAMP4-210ENST00000588555 C12orf74Q32Q52 190 aa18.3■□□□□ 0.52
SCAMP4-210ENST00000588555 MEGF8Q7Z7M0 2845 aa18.3■□□□□ 0.52
SCAMP4-210ENST00000588555 C3orf79P0CE67 100 aa18.3■□□□□ 0.52
SCAMP4-210ENST00000588555 BTF3P20290 206 aaKnown RBP18.3■□□□□ 0.52
SCAMP4-210ENST00000588555 CRYBA4P53673 196 aa18.3■□□□□ 0.52
SCAMP4-210ENST00000588555 UBE2D3P61077 147 aa18.3■□□□□ 0.52
SCAMP4-210ENST00000588555 UBE2D2P62837 147 aa18.3■□□□□ 0.52
SCAMP4-210ENST00000588555 HSPB8Q9UJY1 196 aa18.3■□□□□ 0.52
SCAMP4-210ENST00000588555 GAGE12JA6NER3 117 aa18.29■□□□□ 0.52
SCAMP4-210ENST00000588555 GAGE1Q13065 139 aa18.29■□□□□ 0.52
SCAMP4-210ENST00000588555 GAGE4Q13068 117 aa18.29■□□□□ 0.52
SCAMP4-210ENST00000588555 GAGE5Q13069 117 aa18.29■□□□□ 0.52
SCAMP4-210ENST00000588555 GAGE13Q4V321 117 aa18.29■□□□□ 0.52
SCAMP4-210ENST00000588555 PRADC1Q9BSG0 188 aa18.29■□□□□ 0.52
SCAMP4-210ENST00000588555 PRO0255Q9UI72 69 aa18.29■□□□□ 0.52
SCAMP4-210ENST00000588555 COL7A1Q02388 2944 aa18.28■□□□□ 0.52
SCAMP4-210ENST00000588555 LINC00694P0DN24 101 aa18.27■□□□□ 0.52
SCAMP4-210ENST00000588555 KRTDAPP60985 99 aa18.27■□□□□ 0.52
SCAMP4-210ENST00000588555 JOSD1Q15040 202 aaPredicted RBP18.27■□□□□ 0.52
SCAMP4-210ENST00000588555 PHLDA1Q8WV24 401 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms