RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 LYRM9A8MSI8 78 aa7.53□□□□□ -1.2
CHMP1B-202ENST00000588284 M0QY20 66 aa7.53□□□□□ -1.2
CHMP1B-202ENST00000588284 IGHV3-53P01767 116 aa7.53□□□□□ -1.2
CHMP1B-202ENST00000588284 G0S2P27469 103 aa7.53□□□□□ -1.2
CHMP1B-202ENST00000588284 LINC00310P59036 64 aa7.53□□□□□ -1.2
CHMP1B-202ENST00000588284 KPRPQ5T749 579 aaPredicted RBP7.53□□□□□ -1.2
CHMP1B-202ENST00000588284 UFSP1Q6NVU6 142 aa7.53□□□□□ -1.2
CHMP1B-202ENST00000588284 Q6ZTI0 123 aa7.53□□□□□ -1.2
CHMP1B-202ENST00000588284 URB1-AS1Q96HZ7 61 aa7.53□□□□□ -1.2
CHMP1B-202ENST00000588284 DNAJC30Q96LL9 226 aa7.53□□□□□ -1.2
CHMP1B-202ENST00000588284 GAGE12BA1L429 117 aa7.52□□□□□ -1.21
CHMP1B-202ENST00000588284 LINC01546A6NGU7 62 aa7.52□□□□□ -1.21
CHMP1B-202ENST00000588284 IFITM10A6NMD0 228 aa7.52□□□□□ -1.21
CHMP1B-202ENST00000588284 TCAPO15273 167 aa7.52□□□□□ -1.21
CHMP1B-202ENST00000588284 GAGE7O76087 117 aa7.52□□□□□ -1.21
CHMP1B-202ENST00000588284 GAS8-AS1O95177 125 aa7.52□□□□□ -1.21
CHMP1B-202ENST00000588284 GAGE12FP0CL80 117 aa7.52□□□□□ -1.21
CHMP1B-202ENST00000588284 GAGE12GP0CL81 117 aa7.52□□□□□ -1.21
CHMP1B-202ENST00000588284 GAGE12IP0CL82 117 aa7.52□□□□□ -1.21
CHMP1B-202ENST00000588284 OR10D4PQ8NGN7 298 aa7.52□□□□□ -1.21
CHMP1B-202ENST00000588284 C18orf15Q96N68 181 aa7.52□□□□□ -1.21
CHMP1B-202ENST00000588284 SMIM2Q9BVW6 85 aa7.52□□□□□ -1.21
CHMP1B-202ENST00000588284 TNFRSF18Q9Y5U5 241 aa7.52□□□□□ -1.21
CHMP1B-202ENST00000588284 TGP01266 2768 aa7.51□□□□□ -1.21
CHMP1B-202ENST00000588284 IGHV3-73A0A0B4J1V6 119 aa7.51□□□□□ -1.21
CHMP1B-202ENST00000588284 TEX48A0A1B0GUV7 120 aa7.51□□□□□ -1.21
CHMP1B-202ENST00000588284 POLR2KP53803 58 aaKnown RBP7.51□□□□□ -1.21
CHMP1B-202ENST00000588284 EMP1P54849 157 aa7.51□□□□□ -1.21
CHMP1B-202ENST00000588284 ORMDL2Q53FV1 153 aa7.51□□□□□ -1.21
CHMP1B-202ENST00000588284 FAM19A2Q8N3H0 131 aa7.51□□□□□ -1.21
CHMP1B-202ENST00000588284 LINC00612Q8N6U2 182 aa7.51□□□□□ -1.21
CHMP1B-202ENST00000588284 RPL39LQ96EH5 51 aaKnown RBP7.51□□□□□ -1.21
CHMP1B-202ENST00000588284 IGLV2-18A0A075B6J9 118 aa7.5□□□□□ -1.21
CHMP1B-202ENST00000588284 IGHV4-28A0A0C4DH34 117 aa7.5□□□□□ -1.21
CHMP1B-202ENST00000588284 TRBV10-1A0A0K0K1A3 114 aa7.5□□□□□ -1.21
CHMP1B-202ENST00000588284 LINC01549A6NIU2 74 aa7.5□□□□□ -1.21
CHMP1B-202ENST00000588284 SPART-AS1P0CW21 52 aa7.5□□□□□ -1.21
CHMP1B-202ENST00000588284 FCER1GP30273 86 aa7.5□□□□□ -1.21
CHMP1B-202ENST00000588284 LAGE3Q14657 143 aa7.5□□□□□ -1.21
CHMP1B-202ENST00000588284 KIR2DL4Q99706 377 aa7.5□□□□□ -1.21
CHMP1B-202ENST00000588284 HSPB8Q9UJY1 196 aa7.5□□□□□ -1.21
CHMP1B-202ENST00000588284 TRGV4A0A0C4DH28 118 aa7.49□□□□□ -1.21
CHMP1B-202ENST00000588284 IGHV1-24A0A0C4DH33 117 aa7.49□□□□□ -1.21
CHMP1B-202ENST00000588284 TRBV27A0A0K0K1C4 114 aa7.49□□□□□ -1.21
CHMP1B-202ENST00000588284 SDHAF1A6NFY7 115 aa7.49□□□□□ -1.21
CHMP1B-202ENST00000588284 LEPROTL1O95214 131 aa7.49□□□□□ -1.21
CHMP1B-202ENST00000588284 HBDP02042 147 aa7.49□□□□□ -1.21
CHMP1B-202ENST00000588284 DEFB121Q5J5C9 76 aa7.49□□□□□ -1.21
CHMP1B-202ENST00000588284 ZNF479Q96JC4 524 aa7.49□□□□□ -1.21
CHMP1B-202ENST00000588284 TMEM70Q9BUB7 260 aa7.49□□□□□ -1.21
CHMP1B-202ENST00000588284 PKD1L1Q8TDX9 2849 aa7.49□□□□□ -1.21
CHMP1B-202ENST00000588284 TRBV6-4A0A1B0GX49 114 aa7.48□□□□□ -1.21
CHMP1B-202ENST00000588284 I3L3M4 83 aa7.48□□□□□ -1.21
CHMP1B-202ENST00000588284 DEFB130BP0DP73 79 aa7.48□□□□□ -1.21
CHMP1B-202ENST00000588284 DEFB130AP0DP74 79 aa7.48□□□□□ -1.21
CHMP1B-202ENST00000588284 RPL36AP83881 106 aaKnown RBP7.48□□□□□ -1.21
CHMP1B-202ENST00000588284 FAM222AQ5U5X8 452 aa7.48□□□□□ -1.21
CHMP1B-202ENST00000588284 CDPF1Q6NVV7 123 aa7.48□□□□□ -1.21
CHMP1B-202ENST00000588284 Q8NAQ8 132 aa7.48□□□□□ -1.21
CHMP1B-202ENST00000588284 RPL36ALQ969Q0 106 aaKnown RBP7.48□□□□□ -1.21
CHMP1B-202ENST00000588284 DKK2Q9UBU2 259 aa7.48□□□□□ -1.21
CHMP1B-202ENST00000588284 VWFP04275 2813 aa7.48□□□□□ -1.21
CHMP1B-202ENST00000588284 K7EIL1 84 aa7.47□□□□□ -1.21
CHMP1B-202ENST00000588284 NUDT3O95989 172 aa7.47□□□□□ -1.21
CHMP1B-202ENST00000588284 DAD1P61803 113 aa7.47□□□□□ -1.21
CHMP1B-202ENST00000588284 JOSD1Q15040 202 aaPredicted RBP7.47□□□□□ -1.21
CHMP1B-202ENST00000588284 Q6ZSN1 163 aa7.47□□□□□ -1.21
CHMP1B-202ENST00000588284 PRADC1Q9BSG0 188 aa7.47□□□□□ -1.21
CHMP1B-202ENST00000588284 TRBV7-3A0A075B6L6 115 aa7.46□□□□□ -1.22
CHMP1B-202ENST00000588284 K7EQD1 137 aa7.46□□□□□ -1.22
CHMP1B-202ENST00000588284 SMIM6P0DI80 62 aa7.46□□□□□ -1.22
CHMP1B-202ENST00000588284 FHL2Q14192 279 aa7.46□□□□□ -1.22
CHMP1B-202ENST00000588284 RHOHQ15669 191 aa7.46□□□□□ -1.22
CHMP1B-202ENST00000588284 PMCHL1Q16048 86 aa7.46□□□□□ -1.22
CHMP1B-202ENST00000588284 NEXN-AS1Q8NBZ9 246 aa7.46□□□□□ -1.22
CHMP1B-202ENST00000588284 SPATA25Q9BR10 227 aa7.46□□□□□ -1.22
CHMP1B-202ENST00000588284 MAP1LC3CQ9BXW4 147 aa7.46□□□□□ -1.22
CHMP1B-202ENST00000588284 ATP5LO75964 103 aa7.45□□□□□ -1.22
CHMP1B-202ENST00000588284 ATP5G1P05496 136 aa7.45□□□□□ -1.22
CHMP1B-202ENST00000588284 BTF3P20290 206 aaKnown RBP7.45□□□□□ -1.22
CHMP1B-202ENST00000588284 KRTDAPP60985 99 aa7.45□□□□□ -1.22
CHMP1B-202ENST00000588284 DAZ4Q86SG3 579 aaKnown RBP7.45□□□□□ -1.22
CHMP1B-202ENST00000588284 SLC25A29Q8N8R3 303 aa7.45□□□□□ -1.22
CHMP1B-202ENST00000588284 ZNRF2Q8NHG8 242 aa7.45□□□□□ -1.22
CHMP1B-202ENST00000588284 DAZ3Q9NR90 486 aaKnown RBP7.45□□□□□ -1.22
CHMP1B-202ENST00000588284 PRO0255Q9UI72 69 aa7.45□□□□□ -1.22
CHMP1B-202ENST00000588284 HHLA3Q9XRX5 114 aa7.45□□□□□ -1.22
CHMP1B-202ENST00000588284 DEFB4AO15263 64 aa7.44□□□□□ -1.22
CHMP1B-202ENST00000588284 SCGB1D1O95968 90 aa7.44□□□□□ -1.22
CHMP1B-202ENST00000588284 C3orf79P0CE67 100 aa7.44□□□□□ -1.22
CHMP1B-202ENST00000588284 P0DMU3 169 aa7.44□□□□□ -1.22
CHMP1B-202ENST00000588284 FAM231AP0DMU4 169 aa7.44□□□□□ -1.22
CHMP1B-202ENST00000588284 FAM231CP0DMU5 169 aa7.44□□□□□ -1.22
CHMP1B-202ENST00000588284 PET117Q6UWS5 81 aa7.44□□□□□ -1.22
CHMP1B-202ENST00000588284 SBSPONQ8IVN8 264 aa7.44□□□□□ -1.22
CHMP1B-202ENST00000588284 C11orf68Q9H3H3 251 aaKnown RBP7.44□□□□□ -1.22
CHMP1B-202ENST00000588284 MEGF8Q7Z7M0 2845 aa7.43□□□□□ -1.22
CHMP1B-202ENST00000588284 A0A096LNJ9 63 aa7.43□□□□□ -1.22
CHMP1B-202ENST00000588284 C20orf202A1L168 122 aa7.43□□□□□ -1.22
CHMP1B-202ENST00000588284 PRB2P02812 416 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms