RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 PPP1R17O96001 155 aa10.85□□□□□ -0.67
CCDC43-203ENST00000588210 RNASE3P12724 160 aaKnown RBP10.85□□□□□ -0.67
CCDC43-203ENST00000588210 RNASE4P34096 147 aaKnown RBP10.85□□□□□ -0.67
CCDC43-203ENST00000588210 SLURP1P55000 103 aa10.85□□□□□ -0.67
CCDC43-203ENST00000588210 NEGR1Q7Z3B1 354 aa10.85□□□□□ -0.67
CCDC43-203ENST00000588210 CHTOPQ9Y3Y2 248 aaKnown RBP10.85□□□□□ -0.67
CCDC43-203ENST00000588210 MUC4Q99102 2169 aa10.84□□□□□ -0.67
CCDC43-203ENST00000588210 F6UB75 175 aa10.84□□□□□ -0.67
CCDC43-203ENST00000588210 HOXD3P31249 432 aaPredicted RBP10.84□□□□□ -0.67
CCDC43-203ENST00000588210 DLX4Q92988 240 aaPredicted RBP10.84□□□□□ -0.67
CCDC43-203ENST00000588210 RHPN1-AS1Q9BWJ2 59 aa10.84□□□□□ -0.67
CCDC43-203ENST00000588210 K7ERJ3 54 aa10.83□□□□□ -0.68
CCDC43-203ENST00000588210 SPRY2O43597 315 aa10.83□□□□□ -0.68
CCDC43-203ENST00000588210 MGPP08493 103 aa10.83□□□□□ -0.68
CCDC43-203ENST00000588210 RPL11P62913 178 aaKnown RBP10.83□□□□□ -0.68
CCDC43-203ENST00000588210 DAZ1Q9NQZ3 744 aaKnown RBP10.83□□□□□ -0.68
CCDC43-203ENST00000588210 NHP2Q9NX24 153 aaKnown RBP10.83□□□□□ -0.68
CCDC43-203ENST00000588210 MGAM2Q2M2H8 2515 aa10.83□□□□□ -0.68
CCDC43-203ENST00000588210 SAP30O75446 220 aa10.83□□□□□ -0.68
CCDC43-203ENST00000588210 AGRNO00468 2067 aa10.82□□□□□ -0.68
CCDC43-203ENST00000588210 KLLNB2CW77 178 aa10.82□□□□□ -0.68
CCDC43-203ENST00000588210 GNRH2O43555 120 aa10.82□□□□□ -0.68
CCDC43-203ENST00000588210 RPL32P62910 135 aaKnown RBP10.82□□□□□ -0.68
CCDC43-203ENST00000588210 SAMD13Q5VXD3 122 aa10.82□□□□□ -0.68
CCDC43-203ENST00000588210 C2orf66Q6UXQ4 117 aa10.82□□□□□ -0.68
CCDC43-203ENST00000588210 OR11H12B2RN74 326 aa10.81□□□□□ -0.68
CCDC43-203ENST00000588210 K7EMT4 169 aa10.81□□□□□ -0.68
CCDC43-203ENST00000588210 OXLD1Q5BKU9 147 aa10.81□□□□□ -0.68
CCDC43-203ENST00000588210 OR11H2Q8NH07 326 aa10.81□□□□□ -0.68
CCDC43-203ENST00000588210 BAALCQ8WXS3 180 aa10.81□□□□□ -0.68
CCDC43-203ENST00000588210 KIF25-AS1Q9Y6Z4 181 aa10.81□□□□□ -0.68
CCDC43-203ENST00000588210 TRBV7-3A0A075B6L6 115 aa10.81□□□□□ -0.68
CCDC43-203ENST00000588210 G3V4G9 280 aa10.81□□□□□ -0.68
CCDC43-203ENST00000588210 E9PLD3 99 aa10.8□□□□□ -0.68
CCDC43-203ENST00000588210 COTL1Q14019 142 aa10.8□□□□□ -0.68
CCDC43-203ENST00000588210 C9orf66Q5T8R8 295 aa10.8□□□□□ -0.68
CCDC43-203ENST00000588210 IGKV3-7A0A075B6H7 116 aa10.8□□□□□ -0.68
CCDC43-203ENST00000588210 MYMXA0A1B0GTQ4 84 aa10.8□□□□□ -0.68
CCDC43-203ENST00000588210 SYNJ2BPP57105 145 aa10.8□□□□□ -0.68
CCDC43-203ENST00000588210 LINC00315P59091 139 aa10.8□□□□□ -0.68
CCDC43-203ENST00000588210 CSTL1Q9H114 145 aa10.8□□□□□ -0.68
CCDC43-203ENST00000588210 SELENOKQ9Y6D0 94 aa10.8□□□□□ -0.68
CCDC43-203ENST00000588210 ID1P41134 155 aa10.79□□□□□ -0.68
CCDC43-203ENST00000588210 INSL3P51460 131 aa10.79□□□□□ -0.68
CCDC43-203ENST00000588210 LINC01549A6NIU2 74 aa10.78□□□□□ -0.68
CCDC43-203ENST00000588210 IGLL5B9A064 214 aa10.78□□□□□ -0.68
CCDC43-203ENST00000588210 WIPF1O43516 503 aa10.78□□□□□ -0.68
CCDC43-203ENST00000588210 C12orf74Q32Q52 190 aa10.78□□□□□ -0.68
CCDC43-203ENST00000588210 DCANP1Q8TF63 244 aa10.78□□□□□ -0.68
CCDC43-203ENST00000588210 HIST1H4GQ99525 98 aa10.78□□□□□ -0.68
CCDC43-203ENST00000588210 A0A1B0GWB2 263 aa10.78□□□□□ -0.68
CCDC43-203ENST00000588210 PRSS29PA6NIE9 313 aa10.78□□□□□ -0.68
CCDC43-203ENST00000588210 LGALS9O00182 355 aa10.78□□□□□ -0.68
CCDC43-203ENST00000588210 BEAN1Q3B7T3 259 aa10.78□□□□□ -0.68
CCDC43-203ENST00000588210 KPRPQ5T749 579 aaPredicted RBP10.78□□□□□ -0.68
CCDC43-203ENST00000588210 FAM159AQ6UWV7 190 aa10.78□□□□□ -0.68
CCDC43-203ENST00000588210 PEMTQ9UBM1 199 aa10.78□□□□□ -0.68
CCDC43-203ENST00000588210 NOTCH3Q9UM47 2321 aa10.78□□□□□ -0.68
CCDC43-203ENST00000588210 ODF3Q96PU9 254 aa10.77□□□□□ -0.69
CCDC43-203ENST00000588210 CYSLTR1Q9Y271 337 aa10.77□□□□□ -0.69
CCDC43-203ENST00000588210 EDN2P20800 178 aa10.77□□□□□ -0.69
CCDC43-203ENST00000588210 ZNF479Q96JC4 524 aa10.77□□□□□ -0.69
CCDC43-203ENST00000588210 POLR2KP53803 58 aaKnown RBP10.76□□□□□ -0.69
CCDC43-203ENST00000588210 SUMO4Q6EEV6 95 aa10.76□□□□□ -0.69
CCDC43-203ENST00000588210 PRADC1Q9BSG0 188 aa10.76□□□□□ -0.69
CCDC43-203ENST00000588210 DUSP14O95147 198 aaKnown RBP10.75□□□□□ -0.69
CCDC43-203ENST00000588210 EGFEM1PQ0D2K5 195 aa10.75□□□□□ -0.69
CCDC43-203ENST00000588210 CRYGDP07320 174 aa10.75□□□□□ -0.69
CCDC43-203ENST00000588210 ZFP2Q6ZN57 461 aa10.75□□□□□ -0.69
CCDC43-203ENST00000588210 FOXI2Q6ZQN5 318 aa10.75□□□□□ -0.69
CCDC43-203ENST00000588210 RRN3P1Q2M238 152 aa10.74□□□□□ -0.69
CCDC43-203ENST00000588210 PAPPA-AS1Q5QFB9 102 aa10.74□□□□□ -0.69
CCDC43-203ENST00000588210 TP53TG1Q9Y2A0 90 aa10.74□□□□□ -0.69
CCDC43-203ENST00000588210 NBEAL1Q6ZS30 2694 aa10.74□□□□□ -0.69
CCDC43-203ENST00000588210 IGLV4-69A0A075B6H9 119 aa10.73□□□□□ -0.69
CCDC43-203ENST00000588210 IGIPA6NJ69 53 aa10.73□□□□□ -0.69
CCDC43-203ENST00000588210 TSHBP01222 138 aa10.73□□□□□ -0.69
CCDC43-203ENST00000588210 CD7P09564 240 aa10.73□□□□□ -0.69
CCDC43-203ENST00000588210 C9orf85Q96MD7 179 aa10.73□□□□□ -0.69
CCDC43-203ENST00000588210 FBN3Q75N90 2809 aa10.73□□□□□ -0.69
CCDC43-203ENST00000588210 TRAV12-3A0A0B4J271 114 aa10.73□□□□□ -0.69
CCDC43-203ENST00000588210 TRBV6-5A0A0K0K1A5 114 aa10.73□□□□□ -0.69
CCDC43-203ENST00000588210 VCYO14598 125 aa10.73□□□□□ -0.69
CCDC43-203ENST00000588210 TMEM141Q96I45 108 aa10.73□□□□□ -0.69
CCDC43-203ENST00000588210 TIMM17AQ99595 171 aa10.73□□□□□ -0.69
CCDC43-203ENST00000588210 ZNF815PA8K554 130 aa10.72□□□□□ -0.69
CCDC43-203ENST00000588210 KIR2DL4Q99706 377 aa10.72□□□□□ -0.69
CCDC43-203ENST00000588210 JPT2Q9H910 190 aa10.72□□□□□ -0.69
CCDC43-203ENST00000588210 IGHV3-16A0A0C4DH30 117 aa10.72□□□□□ -0.69
CCDC43-203ENST00000588210 C11orf86A6NJI1 115 aa10.72□□□□□ -0.69
CCDC43-203ENST00000588210 F8W1H4 67 aa10.72□□□□□ -0.69
CCDC43-203ENST00000588210 IGLV1-51P01701 117 aa10.72□□□□□ -0.69
CCDC43-203ENST00000588210 PMVKQ15126 192 aa10.72□□□□□ -0.69
CCDC43-203ENST00000588210 A0A087WWL8 130 aa10.71□□□□□ -0.69
CCDC43-203ENST00000588210 TRBV27A0A0K0K1C4 114 aa10.71□□□□□ -0.69
CCDC43-203ENST00000588210 KRTAP10-11P60412 298 aa10.71□□□□□ -0.69
CCDC43-203ENST00000588210 HERVK_113P61574 105 aa10.71□□□□□ -0.69
CCDC43-203ENST00000588210 A0A0J9YX75 114 aa10.7□□□□□ -0.7
CCDC43-203ENST00000588210 TEX48A0A1B0GUV7 120 aa10.7□□□□□ -0.7
CCDC43-203ENST00000588210 SDHAF1A6NFY7 115 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms