RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 ATP5G1P05496 136 aa10.52□□□□□ -0.73
NFIX-208ENST00000587260 GATA1P15976 413 aaPredicted RBP10.52□□□□□ -0.73
NFIX-208ENST00000587260 C20orf78Q9BR46 151 aa10.52□□□□□ -0.73
NFIX-208ENST00000587260 TRBV6-4A0A1B0GX49 114 aa10.51□□□□□ -0.73
NFIX-208ENST00000587260 HOXA5P20719 270 aa10.51□□□□□ -0.73
NFIX-208ENST00000587260 COA6Q5JTJ3 125 aaKnown RBP10.51□□□□□ -0.73
NFIX-208ENST00000587260 NIT2Q9NQR4 276 aa10.51□□□□□ -0.73
NFIX-208ENST00000587260 TRGV4A0A0C4DH28 118 aa10.5□□□□□ -0.73
NFIX-208ENST00000587260 TRBV10-1A0A0K0K1A3 114 aa10.5□□□□□ -0.73
NFIX-208ENST00000587260 F5H768 121 aa10.5□□□□□ -0.73
NFIX-208ENST00000587260 RPL32P62910 135 aaKnown RBP10.5□□□□□ -0.73
NFIX-208ENST00000587260 RPL39LQ96EH5 51 aaKnown RBP10.5□□□□□ -0.73
NFIX-208ENST00000587260 SUMO2P61956 95 aaKnown RBP10.49□□□□□ -0.73
NFIX-208ENST00000587260 SLC25A29Q8N8R3 303 aa10.49□□□□□ -0.73
NFIX-208ENST00000587260 DNAJC30Q96LL9 226 aa10.49□□□□□ -0.73
NFIX-208ENST00000587260 DEFB131BA0A096LNP1 70 aa10.48□□□□□ -0.73
NFIX-208ENST00000587260 K7EQD1 137 aa10.48□□□□□ -0.73
NFIX-208ENST00000587260 MAP1LC3AQ9H492 121 aa10.48□□□□□ -0.73
NFIX-208ENST00000587260 TMA7Q9Y2S6 64 aaKnown RBP10.48□□□□□ -0.73
NFIX-208ENST00000587260 TRAV10A0A0B4J240 114 aa10.48□□□□□ -0.73
NFIX-208ENST00000587260 POLR2KP53803 58 aaKnown RBP10.48□□□□□ -0.73
NFIX-208ENST00000587260 IQCJQ1A5X6 159 aa10.48□□□□□ -0.73
NFIX-208ENST00000587260 NEXN-AS1Q8NBZ9 246 aa10.48□□□□□ -0.73
NFIX-208ENST00000587260 ST20Q9HBF5 79 aa10.48□□□□□ -0.73
NFIX-208ENST00000587260 PRO0255Q9UI72 69 aa10.48□□□□□ -0.73
NFIX-208ENST00000587260 HHLA3Q9XRX5 114 aa10.48□□□□□ -0.73
NFIX-208ENST00000587260 IGLV2-18A0A075B6J9 118 aa10.47□□□□□ -0.73
NFIX-208ENST00000587260 A0A0J9YY99 117 aa10.47□□□□□ -0.73
NFIX-208ENST00000587260 NDUFA6P56556 154 aa10.47□□□□□ -0.73
NFIX-208ENST00000587260 RHOHQ15669 191 aa10.47□□□□□ -0.73
NFIX-208ENST00000587260 BAGE3Q86Y29 109 aa10.47□□□□□ -0.73
NFIX-208ENST00000587260 PHLDA1Q8WV24 401 aaPredicted RBP10.47□□□□□ -0.73
NFIX-208ENST00000587260 LINC01546A6NGU7 62 aa10.46□□□□□ -0.74
NFIX-208ENST00000587260 S100A6P06703 90 aa10.46□□□□□ -0.74
NFIX-208ENST00000587260 P0DMU3 169 aa10.46□□□□□ -0.74
NFIX-208ENST00000587260 FAM231AP0DMU4 169 aa10.46□□□□□ -0.74
NFIX-208ENST00000587260 FAM231CP0DMU5 169 aa10.46□□□□□ -0.74
NFIX-208ENST00000587260 CRYBA4P53673 196 aa10.46□□□□□ -0.74
NFIX-208ENST00000587260 LINC00310P59036 64 aa10.46□□□□□ -0.74
NFIX-208ENST00000587260 NIT1Q86X76 327 aa10.46□□□□□ -0.74
NFIX-208ENST00000587260 Q8N8P6 123 aa10.46□□□□□ -0.74
NFIX-208ENST00000587260 URB1-AS1Q96HZ7 61 aa10.46□□□□□ -0.74
NFIX-208ENST00000587260 TMEM70Q9BUB7 260 aa10.46□□□□□ -0.74
NFIX-208ENST00000587260 SMIM2Q9BVW6 85 aa10.46□□□□□ -0.74
NFIX-208ENST00000587260 NXT2Q9NPJ8 142 aaKnown RBP10.46□□□□□ -0.74
NFIX-208ENST00000587260 Q9UF83 564 aa10.46□□□□□ -0.74
NFIX-208ENST00000587260 TRAV26-1A0A087WT03 109 aa10.45□□□□□ -0.74
NFIX-208ENST00000587260 TRBV27A0A0K0K1C4 114 aa10.45□□□□□ -0.74
NFIX-208ENST00000587260 SDHAF1A6NFY7 115 aa10.45□□□□□ -0.74
NFIX-208ENST00000587260 LINC00614P0C842 121 aa10.45□□□□□ -0.74
NFIX-208ENST00000587260 ESDP10768 282 aa10.45□□□□□ -0.74
NFIX-208ENST00000587260 PMCHP20382 165 aa10.45□□□□□ -0.74
NFIX-208ENST00000587260 IFI27P40305 119 aaPredicted RBP10.45□□□□□ -0.74
NFIX-208ENST00000587260 PRSS3P2Q8NHM4 247 aa10.45□□□□□ -0.74
NFIX-208ENST00000587260 CHCHD1Q96BP2 118 aaKnown RBP10.45□□□□□ -0.74
NFIX-208ENST00000587260 PRADC1Q9BSG0 188 aa10.45□□□□□ -0.74
NFIX-208ENST00000587260 TNFRSF18Q9Y5U5 241 aa10.45□□□□□ -0.74
NFIX-208ENST00000587260 TRBV7-3A0A075B6L6 115 aa10.44□□□□□ -0.74
NFIX-208ENST00000587260 LOC389332A0A1B0GUA5 103 aa10.44□□□□□ -0.74
NFIX-208ENST00000587260 C5orf52A6NGY3 159 aa10.44□□□□□ -0.74
NFIX-208ENST00000587260 VCYO14598 125 aa10.44□□□□□ -0.74
NFIX-208ENST00000587260 WWC2-AS2Q96NR7 200 aa10.44□□□□□ -0.74
NFIX-208ENST00000587260 LOC100131303A0A0U1RQF7 123 aa10.43□□□□□ -0.74
NFIX-208ENST00000587260 K7EMI3 77 aa10.43□□□□□ -0.74
NFIX-208ENST00000587260 SERF1AO75920 110 aa10.43□□□□□ -0.74
NFIX-208ENST00000587260 RPL36AP83881 106 aaKnown RBP10.43□□□□□ -0.74
NFIX-208ENST00000587260 ZFAND6Q6FIF0 208 aa10.43□□□□□ -0.74
NFIX-208ENST00000587260 RPL36ALQ969Q0 106 aaKnown RBP10.43□□□□□ -0.74
NFIX-208ENST00000587260 PAX4O43316 350 aa10.43□□□□□ -0.74
NFIX-208ENST00000587260 NUPR1O60356 82 aa10.43□□□□□ -0.74
NFIX-208ENST00000587260 LINC00694P0DN24 101 aa10.43□□□□□ -0.74
NFIX-208ENST00000587260 UBE2D3P61077 147 aa10.43□□□□□ -0.74
NFIX-208ENST00000587260 UBE2D2P62837 147 aa10.43□□□□□ -0.74
NFIX-208ENST00000587260 ZNRF2Q8NHG8 242 aa10.43□□□□□ -0.74
NFIX-208ENST00000587260 VSIG2Q96IQ7 327 aa10.43□□□□□ -0.74
NFIX-208ENST00000587260 AP5S1Q9NUS5 200 aa10.43□□□□□ -0.74
NFIX-208ENST00000587260 DNAH7Q8WXX0 4024 aa10.42□□□□□ -0.74
NFIX-208ENST00000587260 H3BNG1 76 aa10.42□□□□□ -0.74
NFIX-208ENST00000587260 I3L3M4 83 aa10.42□□□□□ -0.74
NFIX-208ENST00000587260 SNRPEP62304 92 aaKnown RBP10.42□□□□□ -0.74
NFIX-208ENST00000587260 FA2HQ7L5A8 372 aa10.42□□□□□ -0.74
NFIX-208ENST00000587260 IGLL5B9A064 214 aa10.41□□□□□ -0.74
NFIX-208ENST00000587260 GYPEP15421 78 aa10.41□□□□□ -0.74
NFIX-208ENST00000587260 RNASEKQ6P5S7 137 aaKnown RBP10.41□□□□□ -0.74
NFIX-208ENST00000587260 MUC7Q8TAX7 377 aa10.41□□□□□ -0.74
NFIX-208ENST00000587260 NUPR2A6NF83 97 aa10.4□□□□□ -0.74
NFIX-208ENST00000587260 TCAPO15273 167 aa10.4□□□□□ -0.74
NFIX-208ENST00000587260 CEMP1Q6PRD7 247 aaPredicted RBP10.4□□□□□ -0.74
NFIX-208ENST00000587260 DAZ4Q86SG3 579 aaKnown RBP10.4□□□□□ -0.74
NFIX-208ENST00000587260 KIR2DL4Q99706 377 aa10.4□□□□□ -0.74
NFIX-208ENST00000587260 DAZ3Q9NR90 486 aaKnown RBP10.4□□□□□ -0.74
NFIX-208ENST00000587260 GAGE12JA6NER3 117 aa10.39□□□□□ -0.75
NFIX-208ENST00000587260 GAGE1Q13065 139 aa10.39□□□□□ -0.75
NFIX-208ENST00000587260 GAGE4Q13068 117 aa10.39□□□□□ -0.75
NFIX-208ENST00000587260 GAGE5Q13069 117 aa10.39□□□□□ -0.75
NFIX-208ENST00000587260 GAGE13Q4V321 117 aa10.39□□□□□ -0.75
NFIX-208ENST00000587260 CSMD3Q7Z407 3707 aa10.39□□□□□ -0.75
NFIX-208ENST00000587260 A0A096LPF7 62 aa10.38□□□□□ -0.75
NFIX-208ENST00000587260 HSBP1O75506 76 aa10.38□□□□□ -0.75
NFIX-208ENST00000587260 NUDT3O95989 172 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms