RNA–Protein interactions for RNA: ENST00000584476.1

MSI2-219, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-219	ENST00000584476	RNASEK	Q6P5S7	137 aa	Known RBP	4.17	□□□□□ -1.74
MSI2-219	ENST00000584476		Q6ZSN1	163 aa		4.17	□□□□□ -1.74
MSI2-219	ENST00000584476		Q6ZWC4	215 aa		4.17	□□□□□ -1.74
MSI2-219	ENST00000584476	NIT1	Q86X76	327 aa		4.17	□□□□□ -1.74
MSI2-219	ENST00000584476	OR11H2	Q8NH07	326 aa		4.17	□□□□□ -1.74
MSI2-219	ENST00000584476	RASL10A	Q92737	203 aa		4.17	□□□□□ -1.74
MSI2-219	ENST00000584476	RNF183	Q96D59	192 aa		4.17	□□□□□ -1.74
MSI2-219	ENST00000584476	RPL39L	Q96EH5	51 aa	Known RBP	4.17	□□□□□ -1.74
MSI2-219	ENST00000584476	MRAP2	Q96G30	205 aa		4.17	□□□□□ -1.74
MSI2-219	ENST00000584476	OVOL2	Q9BRP0	275 aa		4.17	□□□□□ -1.74
MSI2-219	ENST00000584476	RETN	Q9HD89	108 aa		4.17	□□□□□ -1.74
MSI2-219	ENST00000584476	NOTCH3	Q9UM47	2321 aa		4.17	□□□□□ -1.74
MSI2-219	ENST00000584476	IGHV4-28	A0A0C4DH34	117 aa		4.16	□□□□□ -1.74
MSI2-219	ENST00000584476	GAGE12B	A1L429	117 aa		4.16	□□□□□ -1.74
MSI2-219	ENST00000584476	SMIM9	A6NGZ8	99 aa		4.16	□□□□□ -1.74
MSI2-219	ENST00000584476		A8MWV9	139 aa		4.16	□□□□□ -1.74
MSI2-219	ENST00000584476		M0QY20	66 aa		4.16	□□□□□ -1.74
MSI2-219	ENST00000584476	DEFB4A	O15263	64 aa		4.16	□□□□□ -1.74
MSI2-219	ENST00000584476	GAGE7	O76087	117 aa		4.16	□□□□□ -1.74
MSI2-219	ENST00000584476	IGHV3-53	P01767	116 aa		4.16	□□□□□ -1.74
MSI2-219	ENST00000584476	GAGE12F	P0CL80	117 aa		4.16	□□□□□ -1.74
MSI2-219	ENST00000584476	GAGE12G	P0CL81	117 aa		4.16	□□□□□ -1.74
MSI2-219	ENST00000584476	GAGE12I	P0CL82	117 aa		4.16	□□□□□ -1.74
MSI2-219	ENST00000584476	ESD	P10768	282 aa		4.16	□□□□□ -1.74
MSI2-219	ENST00000584476	IFI27	P40305	119 aa	Predicted RBP	4.16	□□□□□ -1.74
MSI2-219	ENST00000584476	ZNF56	Q15929	161 aa		4.16	□□□□□ -1.74
MSI2-219	ENST00000584476	PIK3CD-AS1	Q5SR53	167 aa		4.16	□□□□□ -1.74
MSI2-219	ENST00000584476		Q8NAQ8	132 aa		4.16	□□□□□ -1.74
MSI2-219	ENST00000584476	ZNF479	Q96JC4	524 aa		4.16	□□□□□ -1.74
MSI2-219	ENST00000584476	C1orf43	Q9BWL3	253 aa		4.16	□□□□□ -1.74
MSI2-219	ENST00000584476	VWF	P04275	2813 aa		4.16	□□□□□ -1.74
MSI2-219	ENST00000584476	STAB1	Q9NY15	2570 aa		4.15	□□□□□ -1.74
MSI2-219	ENST00000584476		P0DMU3	169 aa		4.15	□□□□□ -1.75
MSI2-219	ENST00000584476	FAM231A	P0DMU4	169 aa		4.15	□□□□□ -1.75
MSI2-219	ENST00000584476	FAM231C	P0DMU5	169 aa		4.15	□□□□□ -1.75
MSI2-219	ENST00000584476	PMCH	P20382	165 aa		4.15	□□□□□ -1.75
MSI2-219	ENST00000584476	S100A2	P29034	98 aa		4.15	□□□□□ -1.75
MSI2-219	ENST00000584476	PMCHL1	Q16048	86 aa		4.15	□□□□□ -1.75
MSI2-219	ENST00000584476	LGALS9B	Q3B8N2	356 aa		4.15	□□□□□ -1.75
MSI2-219	ENST00000584476	FAM19A2	Q8N3H0	131 aa		4.15	□□□□□ -1.75
MSI2-219	ENST00000584476	OR4C5	Q8NGB2	326 aa		4.15	□□□□□ -1.75
MSI2-219	ENST00000584476	PRSS3P2	Q8NHM4	247 aa		4.15	□□□□□ -1.75
MSI2-219	ENST00000584476	HIST1H2BL	Q99880	126 aa		4.15	□□□□□ -1.75
MSI2-219	ENST00000584476	NDUFAF3	Q9BU61	184 aa		4.15	□□□□□ -1.75
MSI2-219	ENST00000584476	MAP1LC3A	Q9H492	121 aa		4.15	□□□□□ -1.75
MSI2-219	ENST00000584476	FAM30A	Q9NZY2	134 aa		4.15	□□□□□ -1.75
MSI2-219	ENST00000584476		Q9UF83	564 aa		4.15	□□□□□ -1.75
MSI2-219	ENST00000584476	LAMTOR2	Q9Y2Q5	125 aa		4.15	□□□□□ -1.75
MSI2-219	ENST00000584476	IGLV2-18	A0A075B6J9	118 aa		4.14	□□□□□ -1.75
MSI2-219	ENST00000584476	TRGV2	A0A075B6R0	118 aa		4.14	□□□□□ -1.75
MSI2-219	ENST00000584476	TRAV4	A0A0B4J268	109 aa		4.14	□□□□□ -1.75
MSI2-219	ENST00000584476	PRSS47	A8MTI9	375 aa		4.14	□□□□□ -1.75
MSI2-219	ENST00000584476	HSBP1	O75506	76 aa		4.14	□□□□□ -1.75
MSI2-219	ENST00000584476	LINC00614	P0C842	121 aa		4.14	□□□□□ -1.75
MSI2-219	ENST00000584476	DEFB130B	P0DP73	79 aa		4.14	□□□□□ -1.75
MSI2-219	ENST00000584476	DEFB130A	P0DP74	79 aa		4.14	□□□□□ -1.75
MSI2-219	ENST00000584476	MIF	P14174	115 aa		4.14	□□□□□ -1.75
MSI2-219	ENST00000584476	FABP4	P15090	132 aa		4.14	□□□□□ -1.75
MSI2-219	ENST00000584476	SUMO2	P61956	95 aa	Known RBP	4.14	□□□□□ -1.75
MSI2-219	ENST00000584476	DEFB121	Q5J5C9	76 aa		4.14	□□□□□ -1.75
MSI2-219	ENST00000584476	FAM222A	Q5U5X8	452 aa		4.14	□□□□□ -1.75
MSI2-219	ENST00000584476	ZFP2	Q6ZN57	461 aa		4.14	□□□□□ -1.75
MSI2-219	ENST00000584476	FA2H	Q7L5A8	372 aa		4.14	□□□□□ -1.75
MSI2-219	ENST00000584476	NEGR1	Q7Z3B1	354 aa		4.14	□□□□□ -1.75
MSI2-219	ENST00000584476	SBSPON	Q8IVN8	264 aa		4.14	□□□□□ -1.75
MSI2-219	ENST00000584476	LINC00612	Q8N6U2	182 aa		4.14	□□□□□ -1.75
MSI2-219	ENST00000584476	OR10D4P	Q8NGN7	298 aa		4.14	□□□□□ -1.75
MSI2-219	ENST00000584476	DEFB104A	Q8WTQ1	72 aa		4.14	□□□□□ -1.75
MSI2-219	ENST00000584476	CHCHD1	Q96BP2	118 aa	Known RBP	4.14	□□□□□ -1.75
MSI2-219	ENST00000584476	C20orf78	Q9BR46	151 aa		4.14	□□□□□ -1.75
MSI2-219	ENST00000584476	SMIM2	Q9BVW6	85 aa		4.14	□□□□□ -1.75
MSI2-219	ENST00000584476	CELA1	Q9UNI1	258 aa		4.14	□□□□□ -1.75
MSI2-219	ENST00000584476	COL6A5	A8TX70	2615 aa		4.14	□□□□□ -1.75
MSI2-219	ENST00000584476	TRRAP	Q9Y4A5	3859 aa		4.14	□□□□□ -1.75
MSI2-219	ENST00000584476		A0A096LNJ9	63 aa		4.13	□□□□□ -1.75
MSI2-219	ENST00000584476	TRBV6-5	A0A0K0K1A5	114 aa		4.13	□□□□□ -1.75
MSI2-219	ENST00000584476	KRTAP23-1	A1A580	65 aa		4.13	□□□□□ -1.75
MSI2-219	ENST00000584476	LINC01546	A6NGU7	62 aa		4.13	□□□□□ -1.75
MSI2-219	ENST00000584476	RHOD	O00212	210 aa		4.13	□□□□□ -1.75
MSI2-219	ENST00000584476	TCAP	O15273	167 aa		4.13	□□□□□ -1.75
MSI2-219	ENST00000584476	AMT	P48728	403 aa		4.13	□□□□□ -1.75
MSI2-219	ENST00000584476	AKR1D1	P51857	326 aa		4.13	□□□□□ -1.75
MSI2-219	ENST00000584476	POLR2K	P53803	58 aa	Known RBP	4.13	□□□□□ -1.75
MSI2-219	ENST00000584476	FHL2	Q14192	279 aa		4.13	□□□□□ -1.75
MSI2-219	ENST00000584476	KRTAP21-3	Q3LHN1	58 aa		4.13	□□□□□ -1.75
MSI2-219	ENST00000584476		Q8N8P6	123 aa		4.13	□□□□□ -1.75
MSI2-219	ENST00000584476	NEXN-AS1	Q8NBZ9	246 aa		4.13	□□□□□ -1.75
MSI2-219	ENST00000584476	MRAP	Q8TCY5	172 aa		4.13	□□□□□ -1.75
MSI2-219	ENST00000584476	TMEM18	Q96B42	140 aa		4.13	□□□□□ -1.75
MSI2-219	ENST00000584476	PACRG	Q96M98	296 aa	Predicted RBP	4.13	□□□□□ -1.75
MSI2-219	ENST00000584476	EDA2R	Q9HAV5	297 aa		4.13	□□□□□ -1.75
MSI2-219	ENST00000584476	ST20	Q9HBF5	79 aa		4.13	□□□□□ -1.75
MSI2-219	ENST00000584476	NXT2	Q9NPJ8	142 aa	Known RBP	4.13	□□□□□ -1.75
MSI2-219	ENST00000584476	NIT2	Q9NQR4	276 aa		4.13	□□□□□ -1.75
MSI2-219	ENST00000584476	DKK2	Q9UBU2	259 aa		4.13	□□□□□ -1.75
MSI2-219	ENST00000584476	TP53TG1	Q9Y2A0	90 aa		4.13	□□□□□ -1.75
MSI2-219	ENST00000584476	IGHV1-24	A0A0C4DH33	117 aa		4.12	□□□□□ -1.75
MSI2-219	ENST00000584476	SDHAF1	A6NFY7	115 aa		4.12	□□□□□ -1.75
MSI2-219	ENST00000584476	LYRM9	A8MSI8	78 aa		4.12	□□□□□ -1.75
MSI2-219	ENST00000584476		H7C1H1	209 aa		4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 71 ms