RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 ZNF56Q15929 161 aa7.37□□□□□ -1.23
CCDC47-206ENST00000584112 LCE2AQ5TA79 106 aaPredicted RBP7.37□□□□□ -1.23
CCDC47-206ENST00000584112 EIF5AL1Q6IS14 154 aaKnown RBP7.37□□□□□ -1.23
CCDC47-206ENST00000584112 PRR27Q6MZM9 219 aa7.37□□□□□ -1.23
CCDC47-206ENST00000584112 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.37□□□□□ -1.23
CCDC47-206ENST00000584112 OR10AG1Q8NH19 301 aa7.37□□□□□ -1.23
CCDC47-206ENST00000584112 SNAI2O43623 268 aa7.36□□□□□ -1.23
CCDC47-206ENST00000584112 C1QBP02746 253 aa7.36□□□□□ -1.23
CCDC47-206ENST00000584112 OR5AL1P0C617 328 aa7.36□□□□□ -1.23
CCDC47-206ENST00000584112 RPL35P42766 123 aaKnown RBP7.36□□□□□ -1.23
CCDC47-206ENST00000584112 SPANXN1Q5VSR9 72 aa7.36□□□□□ -1.23
CCDC47-206ENST00000584112 OR10G8Q8NGN5 311 aa7.36□□□□□ -1.23
CCDC47-206ENST00000584112 SSBP4Q9BWG4 385 aaPredicted RBP7.36□□□□□ -1.23
CCDC47-206ENST00000584112 GNG13Q9P2W3 67 aa7.36□□□□□ -1.23
CCDC47-206ENST00000584112 TRAV1-1A0A0B4J248 108 aa7.35□□□□□ -1.23
CCDC47-206ENST00000584112 C11orf52Q96A22 123 aa7.35□□□□□ -1.23
CCDC47-206ENST00000584112 KLK12Q9UKR0 248 aa7.35□□□□□ -1.23
CCDC47-206ENST00000584112 IGKV2D-24A0A075B6R9 120 aa7.34□□□□□ -1.23
CCDC47-206ENST00000584112 SMIM17P0DL12 118 aa7.34□□□□□ -1.23
CCDC47-206ENST00000584112 MT1HL1P0DM35 61 aa7.34□□□□□ -1.23
CCDC47-206ENST00000584112 PKIAP61925 76 aa7.34□□□□□ -1.23
CCDC47-206ENST00000584112 Q0VG73 95 aa7.34□□□□□ -1.23
CCDC47-206ENST00000584112 TMEM97Q5BJF2 176 aa7.34□□□□□ -1.23
CCDC47-206ENST00000584112 NEXN-AS1Q8NBZ9 246 aa7.34□□□□□ -1.23
CCDC47-206ENST00000584112 AP1S3Q96PC3 154 aa7.34□□□□□ -1.23
CCDC47-206ENST00000584112 TRBV6-8A0A0A6YYG3 113 aa7.33□□□□□ -1.24
CCDC47-206ENST00000584112 RBFOX3A6NFN3 312 aa7.33□□□□□ -1.24
CCDC47-206ENST00000584112 F5H697 171 aa7.33□□□□□ -1.24
CCDC47-206ENST00000584112 LECT2O14960 151 aa7.33□□□□□ -1.24
CCDC47-206ENST00000584112 IFNA1P01562 189 aa7.33□□□□□ -1.24
CCDC47-206ENST00000584112 RPS20P60866 119 aaKnown RBP7.33□□□□□ -1.24
CCDC47-206ENST00000584112 WFDC2Q14508 124 aa7.33□□□□□ -1.24
CCDC47-206ENST00000584112 CENPWQ5EE01 88 aa7.33□□□□□ -1.24
CCDC47-206ENST00000584112 Q8N976 141 aa7.33□□□□□ -1.24
CCDC47-206ENST00000584112 BAALCQ8WXS3 180 aa7.33□□□□□ -1.24
CCDC47-206ENST00000584112 UBE2WQ96B02 151 aa7.33□□□□□ -1.24
CCDC47-206ENST00000584112 DAZAP1Q96EP5 407 aaKnown RBP7.33□□□□□ -1.24
CCDC47-206ENST00000584112 SMIM12Q96EX1 92 aa7.33□□□□□ -1.24
CCDC47-206ENST00000584112 DERL1Q9BUN8 251 aa7.33□□□□□ -1.24
CCDC47-206ENST00000584112 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.32□□□□□ -1.24
CCDC47-206ENST00000584112 MUC21A0A0G2JKD1 596 aa7.32□□□□□ -1.24
CCDC47-206ENST00000584112 MUC21A0A140T8X8 626 aa7.32□□□□□ -1.24
CCDC47-206ENST00000584112 XKRY2A2RUG3 117 aa7.32□□□□□ -1.24
CCDC47-206ENST00000584112 TMEM262E9PQX1 116 aa7.32□□□□□ -1.24
CCDC47-206ENST00000584112 PDE6DO43924 150 aa7.32□□□□□ -1.24
CCDC47-206ENST00000584112 CRPP02741 224 aa7.32□□□□□ -1.24
CCDC47-206ENST00000584112 GNG4P50150 75 aa7.32□□□□□ -1.24
CCDC47-206ENST00000584112 SULT1A2P50226 295 aa7.32□□□□□ -1.24
CCDC47-206ENST00000584112 CCL20P78556 96 aa7.32□□□□□ -1.24
CCDC47-206ENST00000584112 MEF2BQ02080 365 aaPredicted RBP7.32□□□□□ -1.24
CCDC47-206ENST00000584112 ATRAIDQ6UW56 229 aa7.32□□□□□ -1.24
CCDC47-206ENST00000584112 BIN3Q9NQY0 253 aa7.32□□□□□ -1.24
CCDC47-206ENST00000584112 LPAP08519 4548 aa7.31□□□□□ -1.24
CCDC47-206ENST00000584112 SSTP61278 116 aa7.31□□□□□ -1.24
CCDC47-206ENST00000584112 TCTE3Q8IZS6 198 aa7.31□□□□□ -1.24
CCDC47-206ENST00000584112 FER1L6-AS1Q8NA97 138 aa7.31□□□□□ -1.24
CCDC47-206ENST00000584112 CHCHD5Q9BSY4 110 aa7.31□□□□□ -1.24
CCDC47-206ENST00000584112 TPPP3Q9BW30 176 aa7.31□□□□□ -1.24
CCDC47-206ENST00000584112 C1orf43Q9BWL3 253 aa7.31□□□□□ -1.24
CCDC47-206ENST00000584112 VAX2Q9UIW0 290 aa7.31□□□□□ -1.24
CCDC47-206ENST00000584112 C19orf71A6NCJ1 209 aa7.3□□□□□ -1.24
CCDC47-206ENST00000584112 H7C1H1 209 aa7.3□□□□□ -1.24
CCDC47-206ENST00000584112 IGLC6P0CF74 106 aa7.3□□□□□ -1.24
CCDC47-206ENST00000584112 TAGLN2P37802 199 aaKnown RBP7.3□□□□□ -1.24
CCDC47-206ENST00000584112 KRTAP10-4P60372 401 aaPredicted RBP7.3□□□□□ -1.24
CCDC47-206ENST00000584112 CACNG7P62955 275 aa7.3□□□□□ -1.24
CCDC47-206ENST00000584112 C14orf177Q52M58 125 aa7.3□□□□□ -1.24
CCDC47-206ENST00000584112 Q6ZSA8 131 aa7.3□□□□□ -1.24
CCDC47-206ENST00000584112 SLC51BQ86UW2 128 aa7.3□□□□□ -1.24
CCDC47-206ENST00000584112 OR2D3Q8NGH3 330 aa7.3□□□□□ -1.24
CCDC47-206ENST00000584112 DNAJC30Q96LL9 226 aa7.3□□□□□ -1.24
CCDC47-206ENST00000584112 FAM30AQ9NZY2 134 aa7.3□□□□□ -1.24
CCDC47-206ENST00000584112 KIF25-AS1Q9Y6Z4 181 aa7.3□□□□□ -1.24
CCDC47-206ENST00000584112 TRBV25-1A0A075B6N4 114 aa7.29□□□□□ -1.24
CCDC47-206ENST00000584112 F2Z2F3 143 aa7.29□□□□□ -1.24
CCDC47-206ENST00000584112 IGLV2-8P01709 118 aa7.29□□□□□ -1.24
CCDC47-206ENST00000584112 P01737 135 aa7.29□□□□□ -1.24
CCDC47-206ENST00000584112 ANGP03950 147 aaKnown RBP7.29□□□□□ -1.24
CCDC47-206ENST00000584112 MGPP08493 103 aa7.29□□□□□ -1.24
CCDC47-206ENST00000584112 GZMBP10144 247 aa7.29□□□□□ -1.24
CCDC47-206ENST00000584112 BCL2P10415 239 aa7.29□□□□□ -1.24
CCDC47-206ENST00000584112 MPV17L2Q567V2 206 aa7.29□□□□□ -1.24
CCDC47-206ENST00000584112 C15orf54Q8N8G6 183 aa7.29□□□□□ -1.24
CCDC47-206ENST00000584112 MED9Q9NWA0 146 aa7.29□□□□□ -1.24
CCDC47-206ENST00000584112 RAB19A4D1S5 217 aa7.28□□□□□ -1.24
CCDC47-206ENST00000584112 KRTAP9-7A8MTY7 169 aa7.28□□□□□ -1.24
CCDC47-206ENST00000584112 TRGC1P0CF51 173 aa7.28□□□□□ -1.24
CCDC47-206ENST00000584112 MIAQ16674 131 aa7.28□□□□□ -1.24
CCDC47-206ENST00000584112 ENHOQ6UWT2 76 aa7.28□□□□□ -1.24
CCDC47-206ENST00000584112 IGHV1-24A0A0C4DH33 117 aa7.27□□□□□ -1.25
CCDC47-206ENST00000584112 M0QY20 66 aa7.27□□□□□ -1.25
CCDC47-206ENST00000584112 ODF1Q14990 250 aa7.27□□□□□ -1.25
CCDC47-206ENST00000584112 LCE2CQ5TA81 110 aa7.27□□□□□ -1.25
CCDC47-206ENST00000584112 TRBV20OR9-2A0A075B6H5 130 aa7.26□□□□□ -1.25
CCDC47-206ENST00000584112 IQCJQ1A5X6 159 aa7.26□□□□□ -1.25
CCDC47-206ENST00000584112 SUMO4Q6EEV6 95 aa7.26□□□□□ -1.25
CCDC47-206ENST00000584112 WDR73Q6P4I2 378 aa7.26□□□□□ -1.25
CCDC47-206ENST00000584112 RASL11AQ6T310 242 aa7.26□□□□□ -1.25
CCDC47-206ENST00000584112 NTM-AS1Q6ZSK4 140 aa7.26□□□□□ -1.25
CCDC47-206ENST00000584112 DPH3P1Q9H4G8 78 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms