RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 K7EQD1 137 aa8.18□□□□□ -1.1
CDRT1-207ENST00000583965 PAX4O43316 350 aa8.18□□□□□ -1.1
CDRT1-207ENST00000583965 ESDP10768 282 aa8.18□□□□□ -1.1
CDRT1-207ENST00000583965 RHOHQ15669 191 aa8.18□□□□□ -1.1
CDRT1-207ENST00000583965 KIAA1644Q3SXP7 199 aa8.18□□□□□ -1.1
CDRT1-207ENST00000583965 SLC25A29Q8N8R3 303 aa8.18□□□□□ -1.1
CDRT1-207ENST00000583965 PRADC1Q9BSG0 188 aa8.18□□□□□ -1.1
CDRT1-207ENST00000583965 KLK5Q9Y337 293 aaPredicted RBP8.18□□□□□ -1.1
CDRT1-207ENST00000583965 CSMD3Q7Z407 3707 aa8.18□□□□□ -1.1
CDRT1-207ENST00000583965 TRAV26-1A0A087WT03 109 aa8.17□□□□□ -1.1
CDRT1-207ENST00000583965 TRBV10-1A0A0K0K1A3 114 aa8.17□□□□□ -1.1
CDRT1-207ENST00000583965 PPBPP02775 128 aa8.17□□□□□ -1.1
CDRT1-207ENST00000583965 AMN1Q8IY45 258 aa8.17□□□□□ -1.1
CDRT1-207ENST00000583965 C15orf53Q8NAA6 179 aa8.17□□□□□ -1.1
CDRT1-207ENST00000583965 C18orf32Q8TCD1 76 aa8.17□□□□□ -1.1
CDRT1-207ENST00000583965 RNF185Q96GF1 192 aa8.17□□□□□ -1.1
CDRT1-207ENST00000583965 LAMTOR2Q9Y2Q5 125 aa8.17□□□□□ -1.1
CDRT1-207ENST00000583965 C3orf84H3BNL1 204 aa8.16□□□□□ -1.1
CDRT1-207ENST00000583965 RAB4AP20338 218 aa8.16□□□□□ -1.1
CDRT1-207ENST00000583965 TCTAP57738 103 aa8.16□□□□□ -1.1
CDRT1-207ENST00000583965 MRPL51Q4U2R6 128 aaKnown RBP8.16□□□□□ -1.1
CDRT1-207ENST00000583965 SUMO4Q6EEV6 95 aa8.16□□□□□ -1.1
CDRT1-207ENST00000583965 Q6ZSN1 163 aa8.16□□□□□ -1.1
CDRT1-207ENST00000583965 HIST3H2BBQ8N257 126 aa8.16□□□□□ -1.1
CDRT1-207ENST00000583965 MRAP2Q96G30 205 aa8.16□□□□□ -1.1
CDRT1-207ENST00000583965 VSIG2Q96IQ7 327 aa8.16□□□□□ -1.1
CDRT1-207ENST00000583965 A0A0J9YY99 117 aa8.15□□□□□ -1.1
CDRT1-207ENST00000583965 IGLL5B9A064 214 aa8.15□□□□□ -1.1
CDRT1-207ENST00000583965 M0QY20 66 aa8.15□□□□□ -1.1
CDRT1-207ENST00000583965 LINC00310P59036 64 aa8.15□□□□□ -1.1
CDRT1-207ENST00000583965 ORMDL3Q8N138 153 aa8.15□□□□□ -1.1
CDRT1-207ENST00000583965 PACRGQ96M98 296 aaPredicted RBP8.15□□□□□ -1.1
CDRT1-207ENST00000583965 ICOSQ9Y6W8 199 aa8.15□□□□□ -1.1
CDRT1-207ENST00000583965 DYNC2H1Q8NCM8 4307 aaKnown RBP8.14□□□□□ -1.11
CDRT1-207ENST00000583965 D6R8Y8 96 aa8.14□□□□□ -1.11
CDRT1-207ENST00000583965 PPP1R17O96001 155 aa8.14□□□□□ -1.11
CDRT1-207ENST00000583965 GYPEP15421 78 aa8.14□□□□□ -1.11
CDRT1-207ENST00000583965 RPL36AP83881 106 aaKnown RBP8.14□□□□□ -1.11
CDRT1-207ENST00000583965 MRPL23Q16540 153 aaKnown RBP8.14□□□□□ -1.11
CDRT1-207ENST00000583965 SH2D6Q7Z4S9 175 aa8.14□□□□□ -1.11
CDRT1-207ENST00000583965 BAGE3Q86Y29 109 aa8.14□□□□□ -1.11
CDRT1-207ENST00000583965 RPL36ALQ969Q0 106 aaKnown RBP8.14□□□□□ -1.11
CDRT1-207ENST00000583965 DNAJC30Q96LL9 226 aa8.14□□□□□ -1.11
CDRT1-207ENST00000583965 TRBV7-3A0A075B6L6 115 aa8.13□□□□□ -1.11
CDRT1-207ENST00000583965 IFITM10A6NMD0 228 aa8.13□□□□□ -1.11
CDRT1-207ENST00000583965 SERF1AO75920 110 aa8.13□□□□□ -1.11
CDRT1-207ENST00000583965 CKS2P33552 79 aa8.13□□□□□ -1.11
CDRT1-207ENST00000583965 ZFAND6Q6FIF0 208 aa8.13□□□□□ -1.11
CDRT1-207ENST00000583965 NEXN-AS1Q8NBZ9 246 aa8.13□□□□□ -1.11
CDRT1-207ENST00000583965 PRELID3AQ96N28 172 aa8.13□□□□□ -1.11
CDRT1-207ENST00000583965 NIT2Q9NQR4 276 aa8.13□□□□□ -1.11
CDRT1-207ENST00000583965 A0A096LPF7 62 aa8.12□□□□□ -1.11
CDRT1-207ENST00000583965 TRAV26-2A0A0B4J265 109 aa8.12□□□□□ -1.11
CDRT1-207ENST00000583965 LOC100131303A0A0U1RQF7 123 aa8.12□□□□□ -1.11
CDRT1-207ENST00000583965 PRSS47A8MTI9 375 aa8.12□□□□□ -1.11
CDRT1-207ENST00000583965 NUDT3O95989 172 aa8.12□□□□□ -1.11
CDRT1-207ENST00000583965 P0DMU3 169 aa8.12□□□□□ -1.11
CDRT1-207ENST00000583965 FAM231AP0DMU4 169 aa8.12□□□□□ -1.11
CDRT1-207ENST00000583965 FAM231CP0DMU5 169 aa8.12□□□□□ -1.11
CDRT1-207ENST00000583965 CHCHD1Q96BP2 118 aaKnown RBP8.12□□□□□ -1.11
CDRT1-207ENST00000583965 TNFRSF18Q9Y5U5 241 aa8.12□□□□□ -1.11
CDRT1-207ENST00000583965 TRBV6-5A0A0K0K1A5 114 aa8.11□□□□□ -1.11
CDRT1-207ENST00000583965 GAGE12JA6NER3 117 aa8.11□□□□□ -1.11
CDRT1-207ENST00000583965 LINC00694P0DN24 101 aa8.11□□□□□ -1.11
CDRT1-207ENST00000583965 S100A2P29034 98 aa8.11□□□□□ -1.11
CDRT1-207ENST00000583965 GAGE1Q13065 139 aa8.11□□□□□ -1.11
CDRT1-207ENST00000583965 GAGE4Q13068 117 aa8.11□□□□□ -1.11
CDRT1-207ENST00000583965 GAGE5Q13069 117 aa8.11□□□□□ -1.11
CDRT1-207ENST00000583965 IQCJQ1A5X6 159 aa8.11□□□□□ -1.11
CDRT1-207ENST00000583965 GAGE13Q4V321 117 aa8.11□□□□□ -1.11
CDRT1-207ENST00000583965 CASC10Q5T4H9 136 aa8.11□□□□□ -1.11
CDRT1-207ENST00000583965 NEGR1Q7Z3B1 354 aa8.11□□□□□ -1.11
CDRT1-207ENST00000583965 ZNRF2Q8NHG8 242 aa8.11□□□□□ -1.11
CDRT1-207ENST00000583965 TMEM18Q96B42 140 aa8.11□□□□□ -1.11
CDRT1-207ENST00000583965 HIST1H2BLQ99880 126 aa8.11□□□□□ -1.11
CDRT1-207ENST00000583965 APLNQ9ULZ1 77 aa8.11□□□□□ -1.11
CDRT1-207ENST00000583965 LINC01546A6NGU7 62 aa8.1□□□□□ -1.11
CDRT1-207ENST00000583965 NUPR1O60356 82 aa8.1□□□□□ -1.11
CDRT1-207ENST00000583965 NPYP01303 97 aa8.1□□□□□ -1.11
CDRT1-207ENST00000583965 UBE2D3P61077 147 aa8.1□□□□□ -1.11
CDRT1-207ENST00000583965 UBE2D2P62837 147 aa8.1□□□□□ -1.11
CDRT1-207ENST00000583965 NIT1Q86X76 327 aa8.1□□□□□ -1.11
CDRT1-207ENST00000583965 NRACQ8N912 160 aa8.1□□□□□ -1.11
CDRT1-207ENST00000583965 URB1-AS1Q96HZ7 61 aa8.1□□□□□ -1.11
CDRT1-207ENST00000583965 Q9UF83 564 aa8.1□□□□□ -1.11
CDRT1-207ENST00000583965 STARD9Q9P2P6 4700 aa8.09□□□□□ -1.11
CDRT1-207ENST00000583965 SMKR1H3BMG3 65 aa8.09□□□□□ -1.11
CDRT1-207ENST00000583965 TNFRSF6BO95407 300 aa8.09□□□□□ -1.11
CDRT1-207ENST00000583965 NCR2O95944 276 aa8.09□□□□□ -1.11
CDRT1-207ENST00000583965 LINC00614P0C842 121 aa8.09□□□□□ -1.11
CDRT1-207ENST00000583965 PMCHP20382 165 aa8.09□□□□□ -1.11
CDRT1-207ENST00000583965 DAZ4Q86SG3 579 aaKnown RBP8.09□□□□□ -1.11
CDRT1-207ENST00000583965 ATP6V0E2Q8NHE4 81 aa8.09□□□□□ -1.11
CDRT1-207ENST00000583965 RPL39LQ96EH5 51 aaKnown RBP8.09□□□□□ -1.11
CDRT1-207ENST00000583965 C20orf78Q9BR46 151 aa8.09□□□□□ -1.11
CDRT1-207ENST00000583965 ST20Q9HBF5 79 aa8.09□□□□□ -1.11
CDRT1-207ENST00000583965 DAZ3Q9NR90 486 aaKnown RBP8.09□□□□□ -1.11
CDRT1-207ENST00000583965 GAS8-AS1O95177 125 aa8.08□□□□□ -1.12
CDRT1-207ENST00000583965 TIRAPP58753 221 aa8.08□□□□□ -1.12
CDRT1-207ENST00000583965 RPL32P62910 135 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms