RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 HTN1P15515 57 aa7.39□□□□□ -1.23
SS18-221ENST00000582448 ZNF415Q09FC8 603 aa7.39□□□□□ -1.23
SS18-221ENST00000582448 MRPL51Q4U2R6 128 aaKnown RBP7.39□□□□□ -1.23
SS18-221ENST00000582448 MORN3Q6PF18 240 aaPredicted RBP7.39□□□□□ -1.23
SS18-221ENST00000582448 TRPT1Q86TN4 253 aaKnown RBP7.39□□□□□ -1.23
SS18-221ENST00000582448 PRSS3P2Q8NHM4 247 aa7.39□□□□□ -1.23
SS18-221ENST00000582448 DPH3P1Q9H4G8 78 aa7.39□□□□□ -1.23
SS18-221ENST00000582448 SCRT2Q9NQ03 307 aa7.39□□□□□ -1.23
SS18-221ENST00000582448 MSRB1Q9NZV6 116 aa7.39□□□□□ -1.23
SS18-221ENST00000582448 IGHV3-16A0A0C4DH30 117 aa7.38□□□□□ -1.23
SS18-221ENST00000582448 PPP1R17O96001 155 aa7.38□□□□□ -1.23
SS18-221ENST00000582448 RNASE3P12724 160 aaKnown RBP7.38□□□□□ -1.23
SS18-221ENST00000582448 RAB4AP20338 218 aa7.38□□□□□ -1.23
SS18-221ENST00000582448 PMCHP20382 165 aa7.38□□□□□ -1.23
SS18-221ENST00000582448 EVI2AP22794 236 aa7.38□□□□□ -1.23
SS18-221ENST00000582448 IQCJQ1A5X6 159 aa7.38□□□□□ -1.23
SS18-221ENST00000582448 FA2HQ7L5A8 372 aa7.38□□□□□ -1.23
SS18-221ENST00000582448 MRAP2Q96G30 205 aa7.38□□□□□ -1.23
SS18-221ENST00000582448 LINC00467Q9BRT7 94 aa7.38□□□□□ -1.23
SS18-221ENST00000582448 GOLT1BQ9Y3E0 138 aa7.38□□□□□ -1.23
SS18-221ENST00000582448 LINC00614P0C842 121 aa7.37□□□□□ -1.23
SS18-221ENST00000582448 AMTP48728 403 aa7.37□□□□□ -1.23
SS18-221ENST00000582448 NIT1Q86X76 327 aa7.37□□□□□ -1.23
SS18-221ENST00000582448 C9orf85Q96MD7 179 aa7.37□□□□□ -1.23
SS18-221ENST00000582448 MAP1LC3AQ9H492 121 aa7.37□□□□□ -1.23
SS18-221ENST00000582448 FRAS1Q86XX4 4008 aa7.37□□□□□ -1.23
SS18-221ENST00000582448 A0A0J9YWU9 116 aa7.36□□□□□ -1.23
SS18-221ENST00000582448 CRXO43186 299 aaPredicted RBP7.36□□□□□ -1.23
SS18-221ENST00000582448 NXPH4O95158 308 aa7.36□□□□□ -1.23
SS18-221ENST00000582448 MGPP08493 103 aa7.36□□□□□ -1.23
SS18-221ENST00000582448 CEMP1Q6PRD7 247 aaPredicted RBP7.36□□□□□ -1.23
SS18-221ENST00000582448 C14orf178Q8N769 122 aaPredicted RBP7.36□□□□□ -1.23
SS18-221ENST00000582448 OVOL2Q9BRP0 275 aa7.36□□□□□ -1.23
SS18-221ENST00000582448 SPXQ9BT56 116 aa7.36□□□□□ -1.23
SS18-221ENST00000582448 XCL2Q9UBD3 114 aa7.36□□□□□ -1.23
SS18-221ENST00000582448 TP53TG3Q9ULZ0 132 aa7.36□□□□□ -1.23
SS18-221ENST00000582448 KMT2AQ03164 3969 aa7.35□□□□□ -1.23
SS18-221ENST00000582448 IGHV3OR16-12A0A075B7B8 117 aa7.35□□□□□ -1.23
SS18-221ENST00000582448 NUPR2A6NF83 97 aa7.35□□□□□ -1.23
SS18-221ENST00000582448 IFITM10A6NMD0 228 aa7.35□□□□□ -1.23
SS18-221ENST00000582448 NCR2O95944 276 aa7.35□□□□□ -1.23
SS18-221ENST00000582448 RPL35AP18077 110 aaKnown RBP7.35□□□□□ -1.23
SS18-221ENST00000582448 ZNF876PQ49A33 203 aa7.35□□□□□ -1.23
SS18-221ENST00000582448 LINC00518Q8N0U6 118 aa7.35□□□□□ -1.23
SS18-221ENST00000582448 RNF185Q96GF1 192 aa7.35□□□□□ -1.23
SS18-221ENST00000582448 C12orf57Q99622 126 aa7.35□□□□□ -1.23
SS18-221ENST00000582448 NXT2Q9NPJ8 142 aaKnown RBP7.35□□□□□ -1.23
SS18-221ENST00000582448 MDFICQ9P1T7 246 aa7.35□□□□□ -1.23
SS18-221ENST00000582448 KLK5Q9Y337 293 aaPredicted RBP7.35□□□□□ -1.23
SS18-221ENST00000582448 A0A087WWL8 130 aa7.34□□□□□ -1.23
SS18-221ENST00000582448 LOC389332A0A1B0GUA5 103 aa7.34□□□□□ -1.23
SS18-221ENST00000582448 SMKR1H3BMG3 65 aa7.34□□□□□ -1.23
SS18-221ENST00000582448 TNFRSF6BO95407 300 aa7.34□□□□□ -1.23
SS18-221ENST00000582448 PIK3CD-AS1Q5SR53 167 aa7.34□□□□□ -1.23
SS18-221ENST00000582448 SUMO4Q6EEV6 95 aa7.34□□□□□ -1.23
SS18-221ENST00000582448 KRTAP9-8Q9BYQ0 159 aa7.34□□□□□ -1.23
SS18-221ENST00000582448 A8MWV9 139 aa7.33□□□□□ -1.24
SS18-221ENST00000582448 M0R2P5 195 aa7.33□□□□□ -1.24
SS18-221ENST00000582448 NUPR1O60356 82 aa7.33□□□□□ -1.24
SS18-221ENST00000582448 SCGB1D1O95968 90 aa7.33□□□□□ -1.24
SS18-221ENST00000582448 RBMY1A1P0DJD3 496 aaKnown RBP7.33□□□□□ -1.24
SS18-221ENST00000582448 RBMY1CP0DJD4 496 aa7.33□□□□□ -1.24
SS18-221ENST00000582448 RBMY1FQ15415 496 aaKnown RBP7.33□□□□□ -1.24
SS18-221ENST00000582448 PTH2Q96A98 100 aa7.33□□□□□ -1.24
SS18-221ENST00000582448 NDUFAF3Q9BU61 184 aa7.33□□□□□ -1.24
SS18-221ENST00000582448 CSTL1Q9H114 145 aa7.33□□□□□ -1.24
SS18-221ENST00000582448 GSN-AS1Q9NRJ2 163 aa7.33□□□□□ -1.24
SS18-221ENST00000582448 HERC2O95714 4834 aa7.32□□□□□ -1.24
SS18-221ENST00000582448 H7C1H1 209 aa7.32□□□□□ -1.24
SS18-221ENST00000582448 NPYP01303 97 aa7.32□□□□□ -1.24
SS18-221ENST00000582448 IFI27P40305 119 aaPredicted RBP7.32□□□□□ -1.24
SS18-221ENST00000582448 S100A12P80511 92 aa7.32□□□□□ -1.24
SS18-221ENST00000582448 ZNF56Q15929 161 aa7.32□□□□□ -1.24
SS18-221ENST00000582448 FAM74A4Q5TZK3 123 aa7.32□□□□□ -1.24
SS18-221ENST00000582448 FAM19A2Q8N3H0 131 aa7.32□□□□□ -1.24
SS18-221ENST00000582448 C20orf78Q9BR46 151 aa7.32□□□□□ -1.24
SS18-221ENST00000582448 HSPB8Q9UJY1 196 aa7.32□□□□□ -1.24
SS18-221ENST00000582448 TRAV26-2A0A0B4J265 109 aa7.31□□□□□ -1.24
SS18-221ENST00000582448 SPRY2O43597 315 aa7.31□□□□□ -1.24
SS18-221ENST00000582448 LEPROTL1O95214 131 aa7.31□□□□□ -1.24
SS18-221ENST00000582448 APOC4P55056 127 aa7.31□□□□□ -1.24
SS18-221ENST00000582448 KRTDAPP60985 99 aa7.31□□□□□ -1.24
SS18-221ENST00000582448 JOSD1Q15040 202 aaPredicted RBP7.31□□□□□ -1.24
SS18-221ENST00000582448 RRN3P1Q2M238 152 aa7.31□□□□□ -1.24
SS18-221ENST00000582448 C1orf158Q8N1D5 194 aa7.31□□□□□ -1.24
SS18-221ENST00000582448 TMEM263Q8WUH6 116 aaKnown RBP7.31□□□□□ -1.24
SS18-221ENST00000582448 PHLDA1Q8WV24 401 aaPredicted RBP7.31□□□□□ -1.24
SS18-221ENST00000582448 C16orf74Q96GX8 76 aa7.31□□□□□ -1.24
SS18-221ENST00000582448 IGHV1-24A0A0C4DH33 117 aa7.3□□□□□ -1.24
SS18-221ENST00000582448 C20orf202A1L168 122 aa7.3□□□□□ -1.24
SS18-221ENST00000582448 K7EMI3 77 aa7.3□□□□□ -1.24
SS18-221ENST00000582448 RHODO00212 210 aa7.3□□□□□ -1.24
SS18-221ENST00000582448 G0S2P27469 103 aa7.3□□□□□ -1.24
SS18-221ENST00000582448 DEFB135Q30KP9 77 aa7.3□□□□□ -1.24
SS18-221ENST00000582448 PYY3Q5JQD4 70 aa7.3□□□□□ -1.24
SS18-221ENST00000582448 POM121L12Q8N7R1 296 aa7.3□□□□□ -1.24
SS18-221ENST00000582448 Q8N8P6 123 aa7.3□□□□□ -1.24
SS18-221ENST00000582448 ST20Q9HBF5 79 aa7.3□□□□□ -1.24
SS18-221ENST00000582448 NIT2Q9NQR4 276 aa7.3□□□□□ -1.24
SS18-221ENST00000582448 KIR2DL5BA0A0G2JN68 375 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 172 ms