RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 IFT172Q9UG01 1749 aa0.24□□□□□ -2.37
SMCHD1-206ENST00000581631 SSPOA2VEC9 5147 aa0.24□□□□□ -2.37
SMCHD1-206ENST00000581631 PEG3Q9GZU2 1588 aa0.24□□□□□ -2.37
SMCHD1-206ENST00000581631 POLQO75417 2590 aa0.24□□□□□ -2.37
SMCHD1-206ENST00000581631 FAM135AQ9P2D6 1515 aa0.24□□□□□ -2.37
SMCHD1-206ENST00000581631 ZNF518AQ6AHZ1 1483 aa0.24□□□□□ -2.37
SMCHD1-206ENST00000581631 CPDO75976 1380 aa0.24□□□□□ -2.37
SMCHD1-206ENST00000581631 TRAV12-3A0A0B4J271 114 aa0.24□□□□□ -2.37
SMCHD1-206ENST00000581631 FAM236AA0A1B0GUQ0 79 aa0.24□□□□□ -2.37
SMCHD1-206ENST00000581631 FAM236BA0A1B0GV22 79 aa0.24□□□□□ -2.37
SMCHD1-206ENST00000581631 F2Z2F3 143 aa0.24□□□□□ -2.37
SMCHD1-206ENST00000581631 NDUFB6O95139 128 aa0.24□□□□□ -2.37
SMCHD1-206ENST00000581631 APODP05090 189 aa0.24□□□□□ -2.37
SMCHD1-206ENST00000581631 IL5P05113 134 aa0.24□□□□□ -2.37
SMCHD1-206ENST00000581631 LINC00694P0DN24 101 aa0.24□□□□□ -2.37
SMCHD1-206ENST00000581631 SLC25A6P12236 298 aa0.24□□□□□ -2.37
SMCHD1-206ENST00000581631 CCL3L1P16619 93 aa0.24□□□□□ -2.37
SMCHD1-206ENST00000581631 CBLN1P23435 193 aa0.24□□□□□ -2.37
SMCHD1-206ENST00000581631 BTG2P78543 158 aa0.24□□□□□ -2.37
SMCHD1-206ENST00000581631 EMX2Q04743 252 aa0.24□□□□□ -2.37
SMCHD1-206ENST00000581631 RPL7L1Q6DKI1 246 aaKnown RBP0.24□□□□□ -2.37
SMCHD1-206ENST00000581631 ZNF818PQ6ZRF7 136 aa0.24□□□□□ -2.37
SMCHD1-206ENST00000581631 SPTSSAQ969W0 71 aa0.24□□□□□ -2.37
SMCHD1-206ENST00000581631 PRR15LQ9BU68 103 aa0.24□□□□□ -2.37
SMCHD1-206ENST00000581631 SNRNP25Q9BV90 132 aaKnown RBP0.24□□□□□ -2.37
SMCHD1-206ENST00000581631 RERGLQ9H628 205 aa0.24□□□□□ -2.37
SMCHD1-206ENST00000581631 TMEM242Q9NWH2 141 aa0.24□□□□□ -2.37
SMCHD1-206ENST00000581631 PLAC8Q9NZF1 115 aa0.24□□□□□ -2.37
SMCHD1-206ENST00000581631 ABCA12Q86UK0 2595 aa0.24□□□□□ -2.37
SMCHD1-206ENST00000581631 LRRC37A2A6NM11 1700 aa0.24□□□□□ -2.37
SMCHD1-206ENST00000581631 QRICH2Q9H0J4 1663 aa0.24□□□□□ -2.37
SMCHD1-206ENST00000581631 SHROOM2Q13796 1616 aa0.24□□□□□ -2.37
SMCHD1-206ENST00000581631 IFT140Q96RY7 1462 aa0.23□□□□□ -2.37
SMCHD1-206ENST00000581631 SMG6Q86US8 1419 aaKnown RBP0.23□□□□□ -2.37
SMCHD1-206ENST00000581631 TTC28Q96AY4 2481 aa0.23□□□□□ -2.37
SMCHD1-206ENST00000581631 TPRP12270 2363 aaKnown RBP0.23□□□□□ -2.37
SMCHD1-206ENST00000581631 TRBV7-1A0A0A6YYK4 115 aa0.23□□□□□ -2.37
SMCHD1-206ENST00000581631 A0A0D9SG42 100 aa0.23□□□□□ -2.37
SMCHD1-206ENST00000581631 TRBV10-3A0A0K0K1G6 114 aa0.23□□□□□ -2.37
SMCHD1-206ENST00000581631 K7EP13 123 aa0.23□□□□□ -2.37
SMCHD1-206ENST00000581631 APOC4-APOC2K7ER74 178 aa0.23□□□□□ -2.37
SMCHD1-206ENST00000581631 PIRTP0C851 137 aa0.23□□□□□ -2.37
SMCHD1-206ENST00000581631 SMIM6P0DI80 62 aa0.23□□□□□ -2.37
SMCHD1-206ENST00000581631 FGF7P21781 194 aa0.23□□□□□ -2.37
SMCHD1-206ENST00000581631 SPINK7P58062 85 aa0.23□□□□□ -2.37
SMCHD1-206ENST00000581631 CCL8P80075 99 aa0.23□□□□□ -2.37
SMCHD1-206ENST00000581631 C9orf116Q5BN46 136 aaPredicted RBP0.23□□□□□ -2.37
SMCHD1-206ENST00000581631 MIC13Q5XKP0 118 aa0.23□□□□□ -2.37
SMCHD1-206ENST00000581631 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.23□□□□□ -2.37
SMCHD1-206ENST00000581631 SMIM11BQ8TCY0 68 aa0.23□□□□□ -2.37
SMCHD1-206ENST00000581631 COX7B2Q8TF08 81 aa0.23□□□□□ -2.37
SMCHD1-206ENST00000581631 TSKUQ8WUA8 353 aa0.23□□□□□ -2.37
SMCHD1-206ENST00000581631 IFI27L1Q96BM0 104 aa0.23□□□□□ -2.37
SMCHD1-206ENST00000581631 SPANXDQ9BXN6 97 aa0.23□□□□□ -2.37
SMCHD1-206ENST00000581631 NAA60Q9H7X0 242 aa0.23□□□□□ -2.37
SMCHD1-206ENST00000581631 NDUFA12Q9UI09 145 aa0.23□□□□□ -2.37
SMCHD1-206ENST00000581631 V9GYV3 84 aa0.23□□□□□ -2.37
SMCHD1-206ENST00000581631 ABCA3Q99758 1704 aa0.23□□□□□ -2.37
SMCHD1-206ENST00000581631 TET3O43151 1660 aa0.23□□□□□ -2.37
SMCHD1-206ENST00000581631 MAST4O15021 2626 aa0.23□□□□□ -2.37
SMCHD1-206ENST00000581631 MAPKBP1O60336 1514 aa0.23□□□□□ -2.37
SMCHD1-206ENST00000581631 PDCD11Q14690 1871 aaKnown RBP0.22□□□□□ -2.37
SMCHD1-206ENST00000581631 IGSF10Q6WRI0 2623 aa0.22□□□□□ -2.37
SMCHD1-206ENST00000581631 MYO7BQ6PIF6 2116 aa0.22□□□□□ -2.37
SMCHD1-206ENST00000581631 ARAP2Q8WZ64 1704 aa0.22□□□□□ -2.37
SMCHD1-206ENST00000581631 SPTBN2O15020 2390 aa0.22□□□□□ -2.37
SMCHD1-206ENST00000581631 C2CD3Q4AC94 2353 aa0.22□□□□□ -2.37
SMCHD1-206ENST00000581631 SPAARA0A1B0GVQ0 90 aa0.22□□□□□ -2.37
SMCHD1-206ENST00000581631 FAM25AB3EWG3 89 aa0.22□□□□□ -2.37
SMCHD1-206ENST00000581631 FAM25CB3EWG5 89 aa0.22□□□□□ -2.37
SMCHD1-206ENST00000581631 FAM25GB3EWG6 89 aa0.22□□□□□ -2.37
SMCHD1-206ENST00000581631 NDUFA2O43678 99 aa0.22□□□□□ -2.37
SMCHD1-206ENST00000581631 SNCGO76070 127 aa0.22□□□□□ -2.37
SMCHD1-206ENST00000581631 LY6G6CO95867 125 aa0.22□□□□□ -2.37
SMCHD1-206ENST00000581631 UBE2D1P51668 147 aa0.22□□□□□ -2.37
SMCHD1-206ENST00000581631 ELOF1P60002 83 aaKnown RBP0.22□□□□□ -2.37
SMCHD1-206ENST00000581631 Q5VV11 94 aa0.22□□□□□ -2.37
SMCHD1-206ENST00000581631 Q6AWC8 147 aa0.22□□□□□ -2.37
SMCHD1-206ENST00000581631 C20orf197Q8N268 126 aa0.22□□□□□ -2.37
SMCHD1-206ENST00000581631 SDF2Q99470 211 aa0.22□□□□□ -2.37
SMCHD1-206ENST00000581631 PDCD10Q9BUL8 212 aa0.22□□□□□ -2.37
SMCHD1-206ENST00000581631 LINC00470Q9BZP3 86 aa0.22□□□□□ -2.37
SMCHD1-206ENST00000581631 NRKQ7Z2Y5 1582 aa0.22□□□□□ -2.37
SMCHD1-206ENST00000581631 CELSR2Q9HCU4 2923 aa0.22□□□□□ -2.37
SMCHD1-206ENST00000581631 CHD9Q3L8U1 2897 aa0.22□□□□□ -2.37
SMCHD1-206ENST00000581631 ZFYVE26Q68DK2 2539 aa0.22□□□□□ -2.37
SMCHD1-206ENST00000581631 A2ML1A8K2U0 1454 aa0.22□□□□□ -2.37
SMCHD1-206ENST00000581631 CHD1O14646 1710 aa0.21□□□□□ -2.38
SMCHD1-206ENST00000581631 KTN1Q86UP2 1357 aaKnown RBP0.21□□□□□ -2.38
SMCHD1-206ENST00000581631 MYOM1P52179 1685 aa0.21□□□□□ -2.38
SMCHD1-206ENST00000581631 KIF21AQ7Z4S6 1674 aa0.21□□□□□ -2.38
SMCHD1-206ENST00000581631 RAPGEF6Q8TEU7 1601 aa0.21□□□□□ -2.38
SMCHD1-206ENST00000581631 NCOR1O75376 2440 aa0.21□□□□□ -2.38
SMCHD1-206ENST00000581631 PIN1P1O15428 100 aa0.21□□□□□ -2.38
SMCHD1-206ENST00000581631 PITX3O75364 302 aa0.21□□□□□ -2.38
SMCHD1-206ENST00000581631 SIX6O95475 246 aa0.21□□□□□ -2.38
SMCHD1-206ENST00000581631 Q56UQ5 140 aa0.21□□□□□ -2.38
SMCHD1-206ENST00000581631 RPL13AP3Q6NVV1 102 aa0.21□□□□□ -2.38
SMCHD1-206ENST00000581631 VMO1Q7Z5L0 202 aa0.21□□□□□ -2.38
SMCHD1-206ENST00000581631 DPH3Q96FX2 82 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms