RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 LINC00614P0C842 121 aa5.67□□□□□ -1.5
KPNB1-210ENST00000580573 GATA1P15976 413 aaPredicted RBP5.67□□□□□ -1.5
KPNB1-210ENST00000580573 POLR2KP53803 58 aaKnown RBP5.67□□□□□ -1.5
KPNB1-210ENST00000580573 NIT1Q86X76 327 aa5.67□□□□□ -1.5
KPNB1-210ENST00000580573 BAGE3Q86Y29 109 aa5.67□□□□□ -1.5
KPNB1-210ENST00000580573 OR11H2Q8NH07 326 aa5.67□□□□□ -1.5
KPNB1-210ENST00000580573 NOP10Q9NPE3 64 aaKnown RBP5.67□□□□□ -1.5
KPNB1-210ENST00000580573 NXT2Q9NPJ8 142 aaKnown RBP5.67□□□□□ -1.5
KPNB1-210ENST00000580573 STAB2Q8WWQ8 2551 aa5.66□□□□□ -1.5
KPNB1-210ENST00000580573 MEGF8Q7Z7M0 2845 aa5.66□□□□□ -1.5
KPNB1-210ENST00000580573 A0A096LNJ9 63 aa5.66□□□□□ -1.5
KPNB1-210ENST00000580573 TRGV1A0A0A0MS02 117 aa5.66□□□□□ -1.5
KPNB1-210ENST00000580573 IGHV4-28A0A0C4DH34 117 aa5.66□□□□□ -1.5
KPNB1-210ENST00000580573 TRBV27A0A0K0K1C4 114 aa5.66□□□□□ -1.5
KPNB1-210ENST00000580573 MGPP08493 103 aa5.66□□□□□ -1.5
KPNB1-210ENST00000580573 PMCHP20382 165 aa5.66□□□□□ -1.5
KPNB1-210ENST00000580573 SUMO2P61956 95 aaKnown RBP5.66□□□□□ -1.5
KPNB1-210ENST00000580573 FAM74A4Q5TZK3 123 aa5.66□□□□□ -1.5
KPNB1-210ENST00000580573 Q8N8P6 123 aa5.66□□□□□ -1.5
KPNB1-210ENST00000580573 RPL39LQ96EH5 51 aaKnown RBP5.66□□□□□ -1.5
KPNB1-210ENST00000580573 SMIM2Q9BVW6 85 aa5.66□□□□□ -1.5
KPNB1-210ENST00000580573 C11orf68Q9H3H3 251 aaKnown RBP5.66□□□□□ -1.5
KPNB1-210ENST00000580573 MAP1LC3AQ9H492 121 aa5.66□□□□□ -1.5
KPNB1-210ENST00000580573 IGHV1-24A0A0C4DH33 117 aa5.65□□□□□ -1.5
KPNB1-210ENST00000580573 H7C1H1 209 aa5.65□□□□□ -1.5
KPNB1-210ENST00000580573 IFI27P40305 119 aaPredicted RBP5.65□□□□□ -1.5
KPNB1-210ENST00000580573 ZNF56Q15929 161 aa5.65□□□□□ -1.5
KPNB1-210ENST00000580573 Q6ZSN1 163 aa5.65□□□□□ -1.5
KPNB1-210ENST00000580573 TMEM18Q96B42 140 aa5.65□□□□□ -1.5
KPNB1-210ENST00000580573 ZNF479Q96JC4 524 aa5.65□□□□□ -1.5
KPNB1-210ENST00000580573 TM2D3Q9BRN9 247 aa5.65□□□□□ -1.5
KPNB1-210ENST00000580573 TMEM70Q9BUB7 260 aa5.65□□□□□ -1.5
KPNB1-210ENST00000580573 NIT2Q9NQR4 276 aa5.65□□□□□ -1.5
KPNB1-210ENST00000580573 DKK2Q9UBU2 259 aa5.65□□□□□ -1.5
KPNB1-210ENST00000580573 TRBV10-1A0A0K0K1A3 114 aa5.64□□□□□ -1.51
KPNB1-210ENST00000580573 TEX48A0A1B0GUV7 120 aa5.64□□□□□ -1.51
KPNB1-210ENST00000580573 HSBP1O75506 76 aa5.64□□□□□ -1.51
KPNB1-210ENST00000580573 LINC00694P0DN24 101 aa5.64□□□□□ -1.51
KPNB1-210ENST00000580573 RNASEKQ6P5S7 137 aaKnown RBP5.64□□□□□ -1.51
KPNB1-210ENST00000580573 OR4C5Q8NGB2 326 aa5.64□□□□□ -1.51
KPNB1-210ENST00000580573 DNAJC30Q96LL9 226 aa5.64□□□□□ -1.51
KPNB1-210ENST00000580573 TRBV6-4A0A1B0GX49 114 aa5.63□□□□□ -1.51
KPNB1-210ENST00000580573 GAGE12BA1L429 117 aa5.63□□□□□ -1.51
KPNB1-210ENST00000580573 SDHAF1A6NFY7 115 aa5.63□□□□□ -1.51
KPNB1-210ENST00000580573 F5H697 171 aa5.63□□□□□ -1.51
KPNB1-210ENST00000580573 GAGE7O76087 117 aa5.63□□□□□ -1.51
KPNB1-210ENST00000580573 GAGE12FP0CL80 117 aa5.63□□□□□ -1.51
KPNB1-210ENST00000580573 GAGE12GP0CL81 117 aa5.63□□□□□ -1.51
KPNB1-210ENST00000580573 GAGE12IP0CL82 117 aa5.63□□□□□ -1.51
KPNB1-210ENST00000580573 FABP4P15090 132 aa5.63□□□□□ -1.51
KPNB1-210ENST00000580573 S100A2P29034 98 aa5.63□□□□□ -1.51
KPNB1-210ENST00000580573 AMTP48728 403 aa5.63□□□□□ -1.51
KPNB1-210ENST00000580573 FHL2Q14192 279 aa5.63□□□□□ -1.51
KPNB1-210ENST00000580573 PDZD11Q5EBL8 140 aa5.63□□□□□ -1.51
KPNB1-210ENST00000580573 FAM222AQ5U5X8 452 aa5.63□□□□□ -1.51
KPNB1-210ENST00000580573 FA2HQ7L5A8 372 aa5.63□□□□□ -1.51
KPNB1-210ENST00000580573 NEXN-AS1Q8NBZ9 246 aa5.63□□□□□ -1.51
KPNB1-210ENST00000580573 PRSS3P2Q8NHM4 247 aa5.63□□□□□ -1.51
KPNB1-210ENST00000580573 ST20Q9HBF5 79 aa5.63□□□□□ -1.51
KPNB1-210ENST00000580573 TRGV2A0A075B6R0 118 aa5.62□□□□□ -1.51
KPNB1-210ENST00000580573 LOC389332A0A1B0GUA5 103 aa5.62□□□□□ -1.51
KPNB1-210ENST00000580573 K7EQD1 137 aa5.62□□□□□ -1.51
KPNB1-210ENST00000580573 VCYO14598 125 aa5.62□□□□□ -1.51
KPNB1-210ENST00000580573 SBSPONQ8IVN8 264 aa5.62□□□□□ -1.51
KPNB1-210ENST00000580573 FAM19A2Q8N3H0 131 aa5.62□□□□□ -1.51
KPNB1-210ENST00000580573 SLC25A29Q8N8R3 303 aa5.62□□□□□ -1.51
KPNB1-210ENST00000580573 Q9UF83 564 aa5.62□□□□□ -1.51
KPNB1-210ENST00000580573 CELA1Q9UNI1 258 aa5.62□□□□□ -1.51
KPNB1-210ENST00000580573 IGHV3-73A0A0B4J1V6 119 aa5.61□□□□□ -1.51
KPNB1-210ENST00000580573 TCAPO15273 167 aa5.61□□□□□ -1.51
KPNB1-210ENST00000580573 HBDP02042 147 aa5.61□□□□□ -1.51
KPNB1-210ENST00000580573 SPART-AS1P0CW21 52 aa5.61□□□□□ -1.51
KPNB1-210ENST00000580573 P0DMU3 169 aa5.61□□□□□ -1.51
KPNB1-210ENST00000580573 FAM231AP0DMU4 169 aa5.61□□□□□ -1.51
KPNB1-210ENST00000580573 FAM231CP0DMU5 169 aa5.61□□□□□ -1.51
KPNB1-210ENST00000580573 FCER1GP30273 86 aa5.61□□□□□ -1.51
KPNB1-210ENST00000580573 LAGE3Q14657 143 aa5.61□□□□□ -1.51
KPNB1-210ENST00000580573 ORMDL2Q53FV1 153 aa5.61□□□□□ -1.51
KPNB1-210ENST00000580573 OR10D4PQ8NGN7 298 aa5.61□□□□□ -1.51
KPNB1-210ENST00000580573 SPATA25Q9BR10 227 aa5.61□□□□□ -1.51
KPNB1-210ENST00000580573 RETNQ9HD89 108 aa5.61□□□□□ -1.51
KPNB1-210ENST00000580573 TRBV7-3A0A075B6L6 115 aa5.6□□□□□ -1.51
KPNB1-210ENST00000580573 LINC01549A6NIU2 74 aa5.6□□□□□ -1.51
KPNB1-210ENST00000580573 I3L3M4 83 aa5.6□□□□□ -1.51
KPNB1-210ENST00000580573 TSHBP01222 138 aa5.6□□□□□ -1.51
KPNB1-210ENST00000580573 PRB2P02812 416 aaPredicted RBP5.6□□□□□ -1.51
KPNB1-210ENST00000580573 SMIM6P0DI80 62 aa5.6□□□□□ -1.51
KPNB1-210ENST00000580573 EMP1P54849 157 aa5.6□□□□□ -1.51
KPNB1-210ENST00000580573 UBE2D3P61077 147 aa5.6□□□□□ -1.51
KPNB1-210ENST00000580573 UBE2D2P62837 147 aa5.6□□□□□ -1.51
KPNB1-210ENST00000580573 JOSD1Q15040 202 aaPredicted RBP5.6□□□□□ -1.51
KPNB1-210ENST00000580573 RHOHQ15669 191 aa5.6□□□□□ -1.51
KPNB1-210ENST00000580573 PMCHL1Q16048 86 aa5.6□□□□□ -1.51
KPNB1-210ENST00000580573 SPATA12Q7Z6I5 190 aa5.6□□□□□ -1.51
KPNB1-210ENST00000580573 DEFB4AO15263 64 aa5.59□□□□□ -1.51
KPNB1-210ENST00000580573 LEPROTL1O95214 131 aa5.59□□□□□ -1.51
KPNB1-210ENST00000580573 DEFB130BP0DP73 79 aa5.59□□□□□ -1.51
KPNB1-210ENST00000580573 DEFB130AP0DP74 79 aa5.59□□□□□ -1.51
KPNB1-210ENST00000580573 CRYBA4P53673 196 aa5.59□□□□□ -1.51
KPNB1-210ENST00000580573 PYY3Q5JQD4 70 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms