RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 NMUP48645 174 aa9.37□□□□□ -0.91
CDK5RAP3-217ENST00000580287 OR5A1Q8NGJ0 315 aa9.37□□□□□ -0.91
CDK5RAP3-217ENST00000580287 WFDC10AQ9H1F0 79 aa9.37□□□□□ -0.91
CDK5RAP3-217ENST00000580287 A0A0J9YX75 114 aa9.36□□□□□ -0.91
CDK5RAP3-217ENST00000580287 C14orf178Q8N769 122 aaPredicted RBP9.36□□□□□ -0.91
CDK5RAP3-217ENST00000580287 MGPP08493 103 aa9.36□□□□□ -0.91
CDK5RAP3-217ENST00000580287 CD7P09564 240 aa9.36□□□□□ -0.91
CDK5RAP3-217ENST00000580287 FAM159AQ6UWV7 190 aa9.36□□□□□ -0.91
CDK5RAP3-217ENST00000580287 M0QXV9 152 aa9.35□□□□□ -0.91
CDK5RAP3-217ENST00000580287 FAM19A4Q96LR4 140 aa9.35□□□□□ -0.91
CDK5RAP3-217ENST00000580287 MAP6D1Q9H9H5 199 aa9.35□□□□□ -0.91
CDK5RAP3-217ENST00000580287 NXT2Q9NPJ8 142 aaKnown RBP9.35□□□□□ -0.91
CDK5RAP3-217ENST00000580287 SPINK13Q1W4C9 94 aa9.35□□□□□ -0.91
CDK5RAP3-217ENST00000580287 ODF3L2Q3SX64 289 aa9.35□□□□□ -0.91
CDK5RAP3-217ENST00000580287 SAMD13Q5VXD3 122 aa9.35□□□□□ -0.91
CDK5RAP3-217ENST00000580287 TMEM158Q8WZ71 300 aa9.35□□□□□ -0.91
CDK5RAP3-217ENST00000580287 IGKV2D-26A0A0A0MRZ7 120 aa9.35□□□□□ -0.91
CDK5RAP3-217ENST00000580287 A8MZ25 164 aa9.35□□□□□ -0.91
CDK5RAP3-217ENST00000580287 K7EMI3 77 aa9.35□□□□□ -0.91
CDK5RAP3-217ENST00000580287 IGLV1-51P01701 117 aa9.35□□□□□ -0.91
CDK5RAP3-217ENST00000580287 FABP2P12104 132 aa9.34□□□□□ -0.91
CDK5RAP3-217ENST00000580287 SEC61GP60059 68 aa9.34□□□□□ -0.91
CDK5RAP3-217ENST00000580287 SPAG8Q99932 426 aaPredicted RBP9.34□□□□□ -0.91
CDK5RAP3-217ENST00000580287 MUC4Q99102 2169 aa9.34□□□□□ -0.91
CDK5RAP3-217ENST00000580287 IGHV4-4A0A075B6R2 117 aa9.34□□□□□ -0.91
CDK5RAP3-217ENST00000580287 PRSS1P07477 247 aa9.34□□□□□ -0.91
CDK5RAP3-217ENST00000580287 SAMD5Q5TGI4 173 aa9.34□□□□□ -0.91
CDK5RAP3-217ENST00000580287 SMIM17P0DL12 118 aa9.33□□□□□ -0.92
CDK5RAP3-217ENST00000580287 RBMY1BA6NDE4 496 aaKnown RBP9.33□□□□□ -0.92
CDK5RAP3-217ENST00000580287 RBMY1EA6NEQ0 496 aaKnown RBP9.33□□□□□ -0.92
CDK5RAP3-217ENST00000580287 KLLNB2CW77 178 aa9.33□□□□□ -0.92
CDK5RAP3-217ENST00000580287 PRM2P04554 102 aa9.33□□□□□ -0.92
CDK5RAP3-217ENST00000580287 RBMY1DP0C7P1 496 aaKnown RBP9.33□□□□□ -0.92
CDK5RAP3-217ENST00000580287 SMIM13P0DJ93 91 aa9.33□□□□□ -0.92
CDK5RAP3-217ENST00000580287 RNASE3P12724 160 aaKnown RBP9.33□□□□□ -0.92
CDK5RAP3-217ENST00000580287 FXYD2P54710 66 aa9.33□□□□□ -0.92
CDK5RAP3-217ENST00000580287 C3orf56Q8N813 242 aa9.33□□□□□ -0.92
CDK5RAP3-217ENST00000580287 NRACQ8N912 160 aa9.33□□□□□ -0.92
CDK5RAP3-217ENST00000580287 GCSHP23434 173 aa9.32□□□□□ -0.92
CDK5RAP3-217ENST00000580287 Q8N8P6 123 aa9.32□□□□□ -0.92
CDK5RAP3-217ENST00000580287 DPH3P1Q9H4G8 78 aa9.32□□□□□ -0.92
CDK5RAP3-217ENST00000580287 NBEAL2Q6ZNJ1 2754 aa9.32□□□□□ -0.92
CDK5RAP3-217ENST00000580287 TRBV7-9A0A0J9YWB2 115 aa9.32□□□□□ -0.92
CDK5RAP3-217ENST00000580287 TEX48A0A1B0GUV7 120 aa9.32□□□□□ -0.92
CDK5RAP3-217ENST00000580287 H3BMM0 161 aa9.32□□□□□ -0.92
CDK5RAP3-217ENST00000580287 K7ERJ3 54 aa9.32□□□□□ -0.92
CDK5RAP3-217ENST00000580287 FCER1GP30273 86 aa9.32□□□□□ -0.92
CDK5RAP3-217ENST00000580287 RPL24P83731 157 aaKnown RBP9.32□□□□□ -0.92
CDK5RAP3-217ENST00000580287 FOXI2Q6ZQN5 318 aa9.32□□□□□ -0.92
CDK5RAP3-217ENST00000580287 AMTNQ6UX39 209 aa9.31□□□□□ -0.92
CDK5RAP3-217ENST00000580287 RPL39LQ96EH5 51 aaKnown RBP9.31□□□□□ -0.92
CDK5RAP3-217ENST00000580287 A0A0U1RRA0 63 aa9.31□□□□□ -0.92
CDK5RAP3-217ENST00000580287 GTSCR1Q86UQ5 136 aa9.31□□□□□ -0.92
CDK5RAP3-217ENST00000580287 MRAP2Q96G30 205 aa9.31□□□□□ -0.92
CDK5RAP3-217ENST00000580287 IGLV2-18A0A075B6J9 118 aa9.3□□□□□ -0.92
CDK5RAP3-217ENST00000580287 HTN1P15515 57 aa9.3□□□□□ -0.92
CDK5RAP3-217ENST00000580287 LAGE3Q14657 143 aa9.3□□□□□ -0.92
CDK5RAP3-217ENST00000580287 JPT2Q9H910 190 aa9.3□□□□□ -0.92
CDK5RAP3-217ENST00000580287 OR11H12B2RN74 326 aa9.3□□□□□ -0.92
CDK5RAP3-217ENST00000580287 HLA-DRB4P13762 266 aa9.3□□□□□ -0.92
CDK5RAP3-217ENST00000580287 CHAC1Q9BUX1 264 aa9.3□□□□□ -0.92
CDK5RAP3-217ENST00000580287 HIGD1BQ9P298 99 aa9.3□□□□□ -0.92
CDK5RAP3-217ENST00000580287 HLA-DRB4X5D2U9 266 aa9.3□□□□□ -0.92
CDK5RAP3-217ENST00000580287 A0A087WWL8 130 aa9.29□□□□□ -0.92
CDK5RAP3-217ENST00000580287 F5H697 171 aa9.29□□□□□ -0.92
CDK5RAP3-217ENST00000580287 FAM74A4Q5TZK3 123 aa9.29□□□□□ -0.92
CDK5RAP3-217ENST00000580287 PHLDA1Q8WV24 401 aaPredicted RBP9.29□□□□□ -0.92
CDK5RAP3-217ENST00000580287 HHLA3Q9XRX5 114 aa9.29□□□□□ -0.92
CDK5RAP3-217ENST00000580287 TRAV2A0A0B4J234 112 aa9.29□□□□□ -0.92
CDK5RAP3-217ENST00000580287 RBMY1A1P0DJD3 496 aaKnown RBP9.29□□□□□ -0.92
CDK5RAP3-217ENST00000580287 RBMY1CP0DJD4 496 aa9.29□□□□□ -0.92
CDK5RAP3-217ENST00000580287 RBMY1FQ15415 496 aaKnown RBP9.29□□□□□ -0.92
CDK5RAP3-217ENST00000580287 MED14OSP0DP75 135 aa9.28□□□□□ -0.92
CDK5RAP3-217ENST00000580287 SUMO2P61956 95 aaKnown RBP9.28□□□□□ -0.92
CDK5RAP3-217ENST00000580287 RASL10AQ92737 203 aa9.28□□□□□ -0.92
CDK5RAP3-217ENST00000580287 SMIM2Q9BVW6 85 aa9.28□□□□□ -0.92
CDK5RAP3-217ENST00000580287 C19orf73Q9NVV2 129 aa9.28□□□□□ -0.92
CDK5RAP3-217ENST00000580287 MRPL35Q9NZE8 188 aaKnown RBP9.28□□□□□ -0.92
CDK5RAP3-217ENST00000580287 DUSP14O95147 198 aaKnown RBP9.28□□□□□ -0.92
CDK5RAP3-217ENST00000580287 AZU1P20160 251 aa9.28□□□□□ -0.92
CDK5RAP3-217ENST00000580287 MDFICQ9P1T7 246 aa9.28□□□□□ -0.92
CDK5RAP3-217ENST00000580287 BEAN1Q3B7T3 259 aa9.27□□□□□ -0.93
CDK5RAP3-217ENST00000580287 ZC2HC1BQ5TFG8 222 aa9.27□□□□□ -0.93
CDK5RAP3-217ENST00000580287 DGAT2L7PQ6IED9 249 aa9.27□□□□□ -0.93
CDK5RAP3-217ENST00000580287 Q8N1Y9 231 aa9.27□□□□□ -0.93
CDK5RAP3-217ENST00000580287 GTSF1LQ9H1H1 148 aa9.27□□□□□ -0.93
CDK5RAP3-217ENST00000580287 XCL2Q9UBD3 114 aa9.27□□□□□ -0.93
CDK5RAP3-217ENST00000580287 NOTCH1P46531 2555 aa9.27□□□□□ -0.93
CDK5RAP3-217ENST00000580287 RPL35AP18077 110 aaKnown RBP9.27□□□□□ -0.93
CDK5RAP3-217ENST00000580287 NHP2Q9NX24 153 aaKnown RBP9.27□□□□□ -0.93
CDK5RAP3-217ENST00000580287 TRBV25-1A0A075B6N4 114 aa9.26□□□□□ -0.93
CDK5RAP3-217ENST00000580287 LINC01546A6NGU7 62 aa9.26□□□□□ -0.93
CDK5RAP3-217ENST00000580287 STHQ8IWL8 128 aa9.26□□□□□ -0.93
CDK5RAP3-217ENST00000580287 IGHV1OR15-1A0A075B7D0 117 aa9.26□□□□□ -0.93
CDK5RAP3-217ENST00000580287 IGKCP01834 107 aa9.26□□□□□ -0.93
CDK5RAP3-217ENST00000580287 WIPF1O43516 503 aa9.25□□□□□ -0.93
CDK5RAP3-217ENST00000580287 SMAGPQ0VAQ4 97 aa9.25□□□□□ -0.93
CDK5RAP3-217ENST00000580287 CEND1Q8N111 149 aa9.25□□□□□ -0.93
CDK5RAP3-217ENST00000580287 ODF3Q96PU9 254 aa9.25□□□□□ -0.93
CDK5RAP3-217ENST00000580287 SIGMAR1Q99720 223 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms