RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 TRAV26-1A0A087WT03 109 aa13.26□□□□□ -0.29
LIMD2-209ENST00000580222 A0A0J9YY99 117 aa13.26□□□□□ -0.29
LIMD2-209ENST00000580222 A0A1B0GUT8 65 aa13.26□□□□□ -0.29
LIMD2-209ENST00000580222 SLAQ13239 276 aa13.26□□□□□ -0.29
LIMD2-209ENST00000580222 RHEBQ15382 184 aa13.26□□□□□ -0.29
LIMD2-209ENST00000580222 Q6ZRN7 208 aaPredicted RBP13.26□□□□□ -0.29
LIMD2-209ENST00000580222 C14orf178Q8N769 122 aaPredicted RBP13.26□□□□□ -0.29
LIMD2-209ENST00000580222 CTDSP1Q9GZU7 261 aa13.26□□□□□ -0.29
LIMD2-209ENST00000580222 PRO0255Q9UI72 69 aa13.26□□□□□ -0.29
LIMD2-209ENST00000580222 SNAPINO95295 136 aa13.25□□□□□ -0.29
LIMD2-209ENST00000580222 CRYGDP07320 174 aa13.25□□□□□ -0.29
LIMD2-209ENST00000580222 ZNF56Q15929 161 aa13.25□□□□□ -0.29
LIMD2-209ENST00000580222 SMIM15Q7Z3B0 74 aa13.25□□□□□ -0.29
LIMD2-209ENST00000580222 HHLA3Q9XRX5 114 aa13.25□□□□□ -0.29
LIMD2-209ENST00000580222 C7orf77A4D0Y5 90 aa13.24□□□□□ -0.29
LIMD2-209ENST00000580222 J3QL48 77 aa13.24□□□□□ -0.29
LIMD2-209ENST00000580222 PAX4O43316 350 aa13.24□□□□□ -0.29
LIMD2-209ENST00000580222 MGPP08493 103 aa13.24□□□□□ -0.29
LIMD2-209ENST00000580222 GATA1P15976 413 aaPredicted RBP13.24□□□□□ -0.29
LIMD2-209ENST00000580222 RIGQ13278 110 aa13.24□□□□□ -0.29
LIMD2-209ENST00000580222 UFSP1Q6NVU6 142 aa13.24□□□□□ -0.29
LIMD2-209ENST00000580222 RPS10P5Q9NQ39 176 aa13.24□□□□□ -0.29
LIMD2-209ENST00000580222 PGPEP1Q9NXJ5 209 aa13.24□□□□□ -0.29
LIMD2-209ENST00000580222 CRYBA4P53673 196 aa13.23□□□□□ -0.29
LIMD2-209ENST00000580222 HAMPP81172 84 aa13.23□□□□□ -0.29
LIMD2-209ENST00000580222 DPH3P1Q9H4G8 78 aa13.23□□□□□ -0.29
LIMD2-209ENST00000580222 A0A087WWC5 75 aa13.22□□□□□ -0.29
LIMD2-209ENST00000580222 EVI2AP22794 236 aa13.22□□□□□ -0.29
LIMD2-209ENST00000580222 RHOHQ15669 191 aa13.22□□□□□ -0.29
LIMD2-209ENST00000580222 TTC32Q5I0X7 151 aa13.22□□□□□ -0.29
LIMD2-209ENST00000580222 TRBV6-4A0A1B0GX49 114 aa13.21□□□□□ -0.29
LIMD2-209ENST00000580222 F5H697 171 aa13.21□□□□□ -0.29
LIMD2-209ENST00000580222 K7EQD1 137 aa13.21□□□□□ -0.29
LIMD2-209ENST00000580222 LINC00315P59091 139 aa13.21□□□□□ -0.29
LIMD2-209ENST00000580222 ESRGQ1W209 222 aa13.21□□□□□ -0.29
LIMD2-209ENST00000580222 MRPL54Q6P161 138 aaKnown RBP13.21□□□□□ -0.29
LIMD2-209ENST00000580222 KCNIP4Q6PIL6 250 aa13.21□□□□□ -0.29
LIMD2-209ENST00000580222 VSIG2Q96IQ7 327 aa13.21□□□□□ -0.29
LIMD2-209ENST00000580222 PRADC1Q9BSG0 188 aa13.21□□□□□ -0.29
LIMD2-209ENST00000580222 KIF25-AS1Q9Y6Z4 181 aa13.21□□□□□ -0.29
LIMD2-209ENST00000580222 LRP1Q07954 4544 aaKnown RBP13.2□□□□□ -0.3
LIMD2-209ENST00000580222 H3BNG1 76 aa13.2□□□□□ -0.3
LIMD2-209ENST00000580222 SLC25A29Q8N8R3 303 aa13.2□□□□□ -0.3
LIMD2-209ENST00000580222 ICOSQ9Y6W8 199 aa13.2□□□□□ -0.3
LIMD2-209ENST00000580222 DNAH8Q96JB1 4490 aa13.2□□□□□ -0.3
LIMD2-209ENST00000580222 S100PP25815 95 aa13.19□□□□□ -0.3
LIMD2-209ENST00000580222 RAB4BP61018 213 aa13.19□□□□□ -0.3
LIMD2-209ENST00000580222 Q6ZSN1 163 aa13.19□□□□□ -0.3
LIMD2-209ENST00000580222 IMMP2LQ96T52 175 aa13.19□□□□□ -0.3
LIMD2-209ENST00000580222 TMEM242Q9NWH2 141 aa13.19□□□□□ -0.3
LIMD2-209ENST00000580222 A0A1B0GW15 77 aa13.18□□□□□ -0.3
LIMD2-209ENST00000580222 GYPEP15421 78 aa13.18□□□□□ -0.3
LIMD2-209ENST00000580222 CAMPP49913 170 aa13.18□□□□□ -0.3
LIMD2-209ENST00000580222 HBBP68871 147 aa13.18□□□□□ -0.3
LIMD2-209ENST00000580222 ATP5L2Q7Z4Y8 100 aa13.18□□□□□ -0.3
LIMD2-209ENST00000580222 BTF3L4Q96K17 158 aa13.18□□□□□ -0.3
LIMD2-209ENST00000580222 UPK3BQ9BT76 320 aa13.18□□□□□ -0.3
LIMD2-209ENST00000580222 TNFRSF18Q9Y5U5 241 aa13.18□□□□□ -0.3
LIMD2-209ENST00000580222 LOC100131303A0A0U1RQF7 123 aa13.17□□□□□ -0.3
LIMD2-209ENST00000580222 S100A8P05109 93 aa13.17□□□□□ -0.3
LIMD2-209ENST00000580222 TMEM191AQ9H0A3 160 aa13.17□□□□□ -0.3
LIMD2-209ENST00000580222 URGCP-MRPS24S4R325 110 aa13.16□□□□□ -0.3
LIMD2-209ENST00000580222 A0A096LPF7 62 aa13.15□□□□□ -0.3
LIMD2-209ENST00000580222 A0A1B0GXF2 115 aa13.15□□□□□ -0.3
LIMD2-209ENST00000580222 DNAH10OSP0CZ25 163 aa13.15□□□□□ -0.3
LIMD2-209ENST00000580222 SRIP30626 198 aa13.15□□□□□ -0.3
LIMD2-209ENST00000580222 MRPL23Q16540 153 aaKnown RBP13.15□□□□□ -0.3
LIMD2-209ENST00000580222 SUMO4Q6EEV6 95 aa13.15□□□□□ -0.3
LIMD2-209ENST00000580222 TRAV9-1A0A075B6T8 112 aa13.14□□□□□ -0.31
LIMD2-209ENST00000580222 GAGE12JA6NER3 117 aa13.14□□□□□ -0.31
LIMD2-209ENST00000580222 H7C1H1 209 aa13.14□□□□□ -0.31
LIMD2-209ENST00000580222 GAGE1Q13065 139 aa13.14□□□□□ -0.31
LIMD2-209ENST00000580222 GAGE4Q13068 117 aa13.14□□□□□ -0.31
LIMD2-209ENST00000580222 GAGE5Q13069 117 aa13.14□□□□□ -0.31
LIMD2-209ENST00000580222 GAGE13Q4V321 117 aa13.14□□□□□ -0.31
LIMD2-209ENST00000580222 MRPS16Q9Y3D3 137 aaKnown RBP13.14□□□□□ -0.31
LIMD2-209ENST00000580222 TRBV10-1A0A0K0K1A3 114 aa13.13□□□□□ -0.31
LIMD2-209ENST00000580222 FAM229AH3BQW9 127 aa13.13□□□□□ -0.31
LIMD2-209ENST00000580222 CDPF1Q6NVV7 123 aa13.13□□□□□ -0.31
LIMD2-209ENST00000580222 ATRAIDQ6UW56 229 aa13.13□□□□□ -0.31
LIMD2-209ENST00000580222 AMN1Q8IY45 258 aa13.13□□□□□ -0.31
LIMD2-209ENST00000580222 TRAV26-2A0A0B4J265 109 aa13.12□□□□□ -0.31
LIMD2-209ENST00000580222 RPL36AP83881 106 aaKnown RBP13.12□□□□□ -0.31
LIMD2-209ENST00000580222 RPL36ALQ969Q0 106 aaKnown RBP13.12□□□□□ -0.31
LIMD2-209ENST00000580222 RASL11AQ6T310 242 aa13.11□□□□□ -0.31
LIMD2-209ENST00000580222 NEGR1Q7Z3B1 354 aa13.11□□□□□ -0.31
LIMD2-209ENST00000580222 GATD1Q8NB37 220 aa13.11□□□□□ -0.31
LIMD2-209ENST00000580222 NEXN-AS1Q8NBZ9 246 aa13.11□□□□□ -0.31
LIMD2-209ENST00000580222 RNF185Q96GF1 192 aa13.11□□□□□ -0.31
LIMD2-209ENST00000580222 M0QY20 66 aa13.1□□□□□ -0.31
LIMD2-209ENST00000580222 RAB4AP20338 218 aa13.1□□□□□ -0.31
LIMD2-209ENST00000580222 FAM104BQ5XKR9 115 aa13.1□□□□□ -0.31
LIMD2-209ENST00000580222 SH2D6Q7Z4S9 175 aa13.1□□□□□ -0.31
LIMD2-209ENST00000580222 Q9UF83 564 aa13.1□□□□□ -0.31
LIMD2-209ENST00000580222 FAT3Q8TDW7 4589 aa13.1□□□□□ -0.31
LIMD2-209ENST00000580222 A0A087WTM6 91 aa13.09□□□□□ -0.31
LIMD2-209ENST00000580222 KRTAP29-1A8MX34 341 aaPredicted RBP13.09□□□□□ -0.31
LIMD2-209ENST00000580222 TRBV7-3A0A075B6L6 115 aa13.08□□□□□ -0.32
LIMD2-209ENST00000580222 LINC00694P0DN24 101 aa13.08□□□□□ -0.32
LIMD2-209ENST00000580222 ATP6V0E2Q8NHE4 81 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms