RNA–Protein interactions for RNA: ENST00000579780.5

CDK5RAP3-215, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 611 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-215	ENST00000579780		F5H768	121 aa		11.75	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	NEXN-AS1	Q8NBZ9	246 aa		11.75	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	C20orf78	Q9BR46	151 aa		11.75	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	HHLA3	Q9XRX5	114 aa		11.75	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	HTN3	P15516	51 aa		11.74	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	RAB5B	P61020	215 aa		11.74	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	RPL32	P62910	135 aa	Known RBP	11.74	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	C18orf32	Q8TCD1	76 aa		11.74	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	MAP1LC3A	Q9H492	121 aa		11.74	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	DEFB131B	A0A096LNP1	70 aa		11.73	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	HIST1H2BK	O60814	126 aa		11.73	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	HIST1H2BJ	P06899	126 aa		11.73	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780		P0DMU3	169 aa		11.73	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	FAM231A	P0DMU4	169 aa		11.73	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	FAM231C	P0DMU5	169 aa		11.73	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	LINC00694	P0DN24	101 aa		11.73	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	HIST1H2BO	P23527	126 aa		11.73	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	HIST1H2BB	P33778	126 aa		11.73	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	HIST1H2BD	P58876	126 aa		11.73	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	SUMO2	P61956	95 aa	Known RBP	11.73	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	HIST1H2BC	P62807	126 aa		11.73	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	RPL36A	P83881	106 aa	Known RBP	11.73	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	HIST2H2BE	Q16778	126 aa		11.73	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	11.73	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	HIST1H2BH	Q93079	126 aa		11.73	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	RPL36AL	Q969Q0	106 aa	Known RBP	11.73	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	HIST1H2BN	Q99877	126 aa		11.73	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	HIST1H2BM	Q99879	126 aa		11.73	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	ST20	Q9HBF5	79 aa		11.73	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	PRSS47	A8MTI9	375 aa		11.72	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780		H3BNG1	76 aa		11.72	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	PAX4	O43316	350 aa		11.72	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	VSIG2	Q96IQ7	327 aa		11.72	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	TRBV7-3	A0A075B6L6	115 aa		11.71	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	TRAV26-1	A0A087WT03	109 aa		11.71	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780		Q0VG73	95 aa		11.71	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	TMEM70	Q9BUB7	260 aa		11.71	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	SMIM2	Q9BVW6	85 aa		11.71	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	TNFRSF18	Q9Y5U5	241 aa		11.71	□□□□□ -0.53
CDK5RAP3-215	ENST00000579780	SDHAF1	A6NFY7	115 aa		11.7	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780	GYPE	P15421	78 aa		11.7	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780	UBE2D3	P61077	147 aa		11.7	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780	UBE2D2	P62837	147 aa		11.7	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780	TRBV27	A0A0K0K1C4	114 aa		11.69	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780	LOC100131303	A0A0U1RQF7	123 aa		11.69	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780	GAGE12J	A6NER3	117 aa		11.69	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780	PMCH	P20382	165 aa		11.69	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780	POLR2K	P53803	58 aa	Known RBP	11.69	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780	GAGE1	Q13065	139 aa		11.69	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780	GAGE4	Q13068	117 aa		11.69	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780	GAGE5	Q13069	117 aa		11.69	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780	IQCJ	Q1A5X6	159 aa		11.69	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780	GAGE13	Q4V321	117 aa		11.69	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780	ZNRF2	Q8NHG8	242 aa		11.69	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780	NXT2	Q9NPJ8	142 aa	Known RBP	11.69	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780		Q9UF83	564 aa		11.69	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780	IGLV2-18	A0A075B6J9	118 aa		11.68	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780		A0A0J9YY99	117 aa		11.68	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780		Q8N8P6	123 aa		11.68	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780	PHLDA1	Q8WV24	401 aa	Predicted RBP	11.68	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780	ICOS	Q9Y6W8	199 aa		11.68	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780	DNAH7	Q8WXX0	4024 aa		11.67	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780	DAZ4	Q86SG3	579 aa	Known RBP	11.67	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780	DAZ3	Q9NR90	486 aa	Known RBP	11.67	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780	DYNC2H1	Q8NCM8	4307 aa	Known RBP	11.66	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780	LOC389332	A0A1B0GUA5	103 aa		11.66	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780		K7EMI3	77 aa		11.66	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780	VCY	O14598	125 aa		11.66	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780	TCAP	O15273	167 aa		11.66	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780	MRPL23	Q16540	153 aa	Known RBP	11.66	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780	COA6	Q5JTJ3	125 aa	Known RBP	11.66	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780	SH2D6	Q7Z4S9	175 aa		11.66	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780	BAGE3	Q86Y29	109 aa		11.66	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780		I3L3M4	83 aa		11.65	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780	IFI27	P40305	119 aa	Predicted RBP	11.65	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780	FA2H	Q7L5A8	372 aa		11.65	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780	C15orf53	Q8NAA6	179 aa		11.65	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780	PRSS3P2	Q8NHM4	247 aa		11.65	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780	KIR2DL4	Q99706	377 aa		11.65	□□□□□ -0.54
CDK5RAP3-215	ENST00000579780		A0A096LPF7	62 aa		11.64	□□□□□ -0.55
CDK5RAP3-215	ENST00000579780	NUPR2	A6NF83	97 aa		11.64	□□□□□ -0.55
CDK5RAP3-215	ENST00000579780	LINC01546	A6NGU7	62 aa		11.64	□□□□□ -0.55
CDK5RAP3-215	ENST00000579780	NEGR1	Q7Z3B1	354 aa		11.64	□□□□□ -0.55
CDK5RAP3-215	ENST00000579780	CHCHD1	Q96BP2	118 aa	Known RBP	11.64	□□□□□ -0.55
CDK5RAP3-215	ENST00000579780	LINC00310	P59036	64 aa		11.63	□□□□□ -0.55
CDK5RAP3-215	ENST00000579780	TMEM97	Q5BJF2	176 aa		11.63	□□□□□ -0.55
CDK5RAP3-215	ENST00000579780	RNASEK	Q6P5S7	137 aa	Known RBP	11.63	□□□□□ -0.55
CDK5RAP3-215	ENST00000579780	ATP6V0E2	Q8NHE4	81 aa		11.63	□□□□□ -0.55
CDK5RAP3-215	ENST00000579780	URB1-AS1	Q96HZ7	61 aa		11.63	□□□□□ -0.55
CDK5RAP3-215	ENST00000579780	AP5S1	Q9NUS5	200 aa		11.63	□□□□□ -0.55
CDK5RAP3-215	ENST00000579780	IGHV3-38	A0A0C4DH36	116 aa		11.62	□□□□□ -0.55
CDK5RAP3-215	ENST00000579780	SERF1A	O75920	110 aa		11.62	□□□□□ -0.55
CDK5RAP3-215	ENST00000579780	TSHB	P01222	138 aa		11.62	□□□□□ -0.55
CDK5RAP3-215	ENST00000579780	LINC00614	P0C842	121 aa		11.62	□□□□□ -0.55
CDK5RAP3-215	ENST00000579780	COTL1	Q14019	142 aa		11.62	□□□□□ -0.55
CDK5RAP3-215	ENST00000579780	NIT1	Q86X76	327 aa		11.62	□□□□□ -0.55
CDK5RAP3-215	ENST00000579780	ESD	P10768	282 aa		11.61	□□□□□ -0.55
CDK5RAP3-215	ENST00000579780	ORMDL2	Q53FV1	153 aa		11.61	□□□□□ -0.55
CDK5RAP3-215	ENST00000579780	CEMP1	Q6PRD7	247 aa	Predicted RBP	11.61	□□□□□ -0.55
CDK5RAP3-215	ENST00000579780	GTSF1L	Q9H1H1	148 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms