RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 HIST2H2BEQ16778 126 aa9.77□□□□□ -0.85
TSEN54-206ENST00000579449 OR10J3Q5JRS4 329 aa9.77□□□□□ -0.85
TSEN54-206ENST00000579449 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.77□□□□□ -0.85
TSEN54-206ENST00000579449 Q6ZTC4 211 aa9.77□□□□□ -0.85
TSEN54-206ENST00000579449 SLC25A29Q8N8R3 303 aa9.77□□□□□ -0.85
TSEN54-206ENST00000579449 HIST1H2BHQ93079 126 aa9.77□□□□□ -0.85
TSEN54-206ENST00000579449 HIST1H2BNQ99877 126 aa9.77□□□□□ -0.85
TSEN54-206ENST00000579449 HIST1H2BMQ99879 126 aa9.77□□□□□ -0.85
TSEN54-206ENST00000579449 LAMTOR2Q9Y2Q5 125 aa9.77□□□□□ -0.85
TSEN54-206ENST00000579449 TRBV6-4A0A1B0GX49 114 aa9.76□□□□□ -0.85
TSEN54-206ENST00000579449 F5H768 121 aa9.76□□□□□ -0.85
TSEN54-206ENST00000579449 IQCJQ1A5X6 159 aa9.76□□□□□ -0.85
TSEN54-206ENST00000579449 C18orf32Q8TCD1 76 aa9.76□□□□□ -0.85
TSEN54-206ENST00000579449 NIT2Q9NQR4 276 aa9.76□□□□□ -0.85
TSEN54-206ENST00000579449 Q9UF83 564 aa9.76□□□□□ -0.85
TSEN54-206ENST00000579449 HHLA3Q9XRX5 114 aa9.76□□□□□ -0.85
TSEN54-206ENST00000579449 PPP1R17O96001 155 aa9.75□□□□□ -0.85
TSEN54-206ENST00000579449 CRYBA4P53673 196 aa9.75□□□□□ -0.85
TSEN54-206ENST00000579449 NEXN-AS1Q8NBZ9 246 aa9.75□□□□□ -0.85
TSEN54-206ENST00000579449 PRO0255Q9UI72 69 aa9.75□□□□□ -0.85
TSEN54-206ENST00000579449 TRBV6-5A0A0K0K1A5 114 aa9.74□□□□□ -0.85
TSEN54-206ENST00000579449 LOC100131303A0A0U1RQF7 123 aa9.74□□□□□ -0.85
TSEN54-206ENST00000579449 LOC389332A0A1B0GUA5 103 aa9.74□□□□□ -0.85
TSEN54-206ENST00000579449 RHOHQ15669 191 aa9.74□□□□□ -0.85
TSEN54-206ENST00000579449 PRADC1Q9BSG0 188 aa9.74□□□□□ -0.85
TSEN54-206ENST00000579449 MAP1LC3AQ9H492 121 aa9.74□□□□□ -0.85
TSEN54-206ENST00000579449 ST20Q9HBF5 79 aa9.74□□□□□ -0.85
TSEN54-206ENST00000579449 TMA7Q9Y2S6 64 aaKnown RBP9.74□□□□□ -0.85
TSEN54-206ENST00000579449 TRBV10-1A0A0K0K1A3 114 aa9.73□□□□□ -0.85
TSEN54-206ENST00000579449 PAX4O43316 350 aa9.73□□□□□ -0.85
TSEN54-206ENST00000579449 SUMO2P61956 95 aaKnown RBP9.73□□□□□ -0.85
TSEN54-206ENST00000579449 Q0VG73 95 aa9.73□□□□□ -0.85
TSEN54-206ENST00000579449 DNAJC30Q96LL9 226 aa9.73□□□□□ -0.85
TSEN54-206ENST00000579449 C20orf78Q9BR46 151 aa9.73□□□□□ -0.85
TSEN54-206ENST00000579449 TNFRSF18Q9Y5U5 241 aa9.73□□□□□ -0.85
TSEN54-206ENST00000579449 DEFB131BA0A096LNP1 70 aa9.72□□□□□ -0.85
TSEN54-206ENST00000579449 A0A0J9YY99 117 aa9.72□□□□□ -0.85
TSEN54-206ENST00000579449 GAGE12JA6NER3 117 aa9.72□□□□□ -0.85
TSEN54-206ENST00000579449 PRSS47A8MTI9 375 aa9.72□□□□□ -0.85
TSEN54-206ENST00000579449 NDUFA6P56556 154 aa9.72□□□□□ -0.85
TSEN54-206ENST00000579449 RPL36AP83881 106 aaKnown RBP9.72□□□□□ -0.85
TSEN54-206ENST00000579449 GAGE1Q13065 139 aa9.72□□□□□ -0.85
TSEN54-206ENST00000579449 GAGE4Q13068 117 aa9.72□□□□□ -0.85
TSEN54-206ENST00000579449 GAGE5Q13069 117 aa9.72□□□□□ -0.85
TSEN54-206ENST00000579449 GAGE13Q4V321 117 aa9.72□□□□□ -0.85
TSEN54-206ENST00000579449 ZNRF2Q8NHG8 242 aa9.72□□□□□ -0.85
TSEN54-206ENST00000579449 RPL36ALQ969Q0 106 aaKnown RBP9.72□□□□□ -0.85
TSEN54-206ENST00000579449 VSIG2Q96IQ7 327 aa9.72□□□□□ -0.85
TSEN54-206ENST00000579449 TRAV26-1A0A087WT03 109 aa9.71□□□□□ -0.86
TSEN54-206ENST00000579449 TRAV10A0A0B4J240 114 aa9.71□□□□□ -0.86
TSEN54-206ENST00000579449 SDHAF1A6NFY7 115 aa9.71□□□□□ -0.86
TSEN54-206ENST00000579449 J3QL48 77 aa9.71□□□□□ -0.86
TSEN54-206ENST00000579449 GYPEP15421 78 aa9.71□□□□□ -0.86
TSEN54-206ENST00000579449 IFI27P40305 119 aaPredicted RBP9.71□□□□□ -0.86
TSEN54-206ENST00000579449 POLR2KP53803 58 aaKnown RBP9.71□□□□□ -0.86
TSEN54-206ENST00000579449 BAGE3Q86Y29 109 aa9.71□□□□□ -0.86
TSEN54-206ENST00000579449 PRSS3P2Q8NHM4 247 aa9.71□□□□□ -0.86
TSEN54-206ENST00000579449 TMEM70Q9BUB7 260 aa9.71□□□□□ -0.86
TSEN54-206ENST00000579449 SMIM2Q9BVW6 85 aa9.71□□□□□ -0.86
TSEN54-206ENST00000579449 IGLV2-18A0A075B6J9 118 aa9.7□□□□□ -0.86
TSEN54-206ENST00000579449 TRBV7-3A0A075B6L6 115 aa9.7□□□□□ -0.86
TSEN54-206ENST00000579449 RPL32P62910 135 aaKnown RBP9.7□□□□□ -0.86
TSEN54-206ENST00000579449 NEGR1Q7Z3B1 354 aa9.7□□□□□ -0.86
TSEN54-206ENST00000579449 NIT1Q86X76 327 aa9.7□□□□□ -0.86
TSEN54-206ENST00000579449 Q8N8P6 123 aa9.7□□□□□ -0.86
TSEN54-206ENST00000579449 NXT2Q9NPJ8 142 aaKnown RBP9.7□□□□□ -0.86
TSEN54-206ENST00000579449 VCYO14598 125 aa9.69□□□□□ -0.86
TSEN54-206ENST00000579449 LINC00694P0DN24 101 aa9.69□□□□□ -0.86
TSEN54-206ENST00000579449 PMCHP20382 165 aa9.69□□□□□ -0.86
TSEN54-206ENST00000579449 UBE2D3P61077 147 aa9.69□□□□□ -0.86
TSEN54-206ENST00000579449 UBE2D2P62837 147 aa9.69□□□□□ -0.86
TSEN54-206ENST00000579449 FA2HQ7L5A8 372 aa9.69□□□□□ -0.86
TSEN54-206ENST00000579449 PHLDA1Q8WV24 401 aaPredicted RBP9.69□□□□□ -0.86
TSEN54-206ENST00000579449 URB1-AS1Q96HZ7 61 aa9.69□□□□□ -0.86
TSEN54-206ENST00000579449 FBN3Q75N90 2809 aa9.69□□□□□ -0.86
TSEN54-206ENST00000579449 STAB2Q8WWQ8 2551 aa9.68□□□□□ -0.86
TSEN54-206ENST00000579449 IGHV3-38A0A0C4DH36 116 aa9.68□□□□□ -0.86
TSEN54-206ENST00000579449 TRBV27A0A0K0K1C4 114 aa9.68□□□□□ -0.86
TSEN54-206ENST00000579449 SERF1AO75920 110 aa9.68□□□□□ -0.86
TSEN54-206ENST00000579449 LINC00614P0C842 121 aa9.68□□□□□ -0.86
TSEN54-206ENST00000579449 LINC00310P59036 64 aa9.68□□□□□ -0.86
TSEN54-206ENST00000579449 RNASEKQ6P5S7 137 aaKnown RBP9.68□□□□□ -0.86
TSEN54-206ENST00000579449 DEFB104AQ8WTQ1 72 aa9.68□□□□□ -0.86
TSEN54-206ENST00000579449 I3L3M4 83 aa9.67□□□□□ -0.86
TSEN54-206ENST00000579449 TCAPO15273 167 aa9.67□□□□□ -0.86
TSEN54-206ENST00000579449 NUPR1O60356 82 aa9.67□□□□□ -0.86
TSEN54-206ENST00000579449 S100A6P06703 90 aa9.67□□□□□ -0.86
TSEN54-206ENST00000579449 COA6Q5JTJ3 125 aaKnown RBP9.67□□□□□ -0.86
TSEN54-206ENST00000579449 ICOSQ9Y6W8 199 aa9.67□□□□□ -0.86
TSEN54-206ENST00000579449 LINC01546A6NGU7 62 aa9.66□□□□□ -0.86
TSEN54-206ENST00000579449 H3BNG1 76 aa9.66□□□□□ -0.86
TSEN54-206ENST00000579449 DAZ4Q86SG3 579 aaKnown RBP9.66□□□□□ -0.86
TSEN54-206ENST00000579449 CHCHD1Q96BP2 118 aaKnown RBP9.66□□□□□ -0.86
TSEN54-206ENST00000579449 KIR2DL4Q99706 377 aa9.66□□□□□ -0.86
TSEN54-206ENST00000579449 DAZ3Q9NR90 486 aaKnown RBP9.66□□□□□ -0.86
TSEN54-206ENST00000579449 A0A096LPF7 62 aa9.65□□□□□ -0.86
TSEN54-206ENST00000579449 TSHBP01222 138 aa9.65□□□□□ -0.86
TSEN54-206ENST00000579449 MRPL23Q16540 153 aaKnown RBP9.65□□□□□ -0.86
TSEN54-206ENST00000579449 ATP6V0E2Q8NHE4 81 aa9.65□□□□□ -0.86
TSEN54-206ENST00000579449 AP5S1Q9NUS5 200 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms