RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 UBE2D3P61077 147 aa4.43□□□□□ -1.7
TRAF4-213ENST00000578917 UBE2D2P62837 147 aa4.43□□□□□ -1.7
TRAF4-213ENST00000578917 FAM74A3Q4VXF1 159 aa4.43□□□□□ -1.7
TRAF4-213ENST00000578917 TMEM97Q5BJF2 176 aa4.43□□□□□ -1.7
TRAF4-213ENST00000578917 DAZ4Q86SG3 579 aaKnown RBP4.43□□□□□ -1.7
TRAF4-213ENST00000578917 PGLYRP4Q96LB8 373 aa4.43□□□□□ -1.7
TRAF4-213ENST00000578917 DPH3P1Q9H4G8 78 aa4.43□□□□□ -1.7
TRAF4-213ENST00000578917 DAZ3Q9NR90 486 aaKnown RBP4.43□□□□□ -1.7
TRAF4-213ENST00000578917 FRAS1Q86XX4 4008 aa4.43□□□□□ -1.7
TRAF4-213ENST00000578917 TRBV6-8A0A0A6YYG3 113 aa4.42□□□□□ -1.7
TRAF4-213ENST00000578917 M0QY20 66 aa4.42□□□□□ -1.7
TRAF4-213ENST00000578917 PKIAP61925 76 aa4.42□□□□□ -1.7
TRAF4-213ENST00000578917 ADIRFQ15847 76 aa4.42□□□□□ -1.7
TRAF4-213ENST00000578917 SUMO4Q6EEV6 95 aa4.42□□□□□ -1.7
TRAF4-213ENST00000578917 RASL11AQ6T310 242 aa4.42□□□□□ -1.7
TRAF4-213ENST00000578917 FAM231DQ6ZW35 169 aa4.42□□□□□ -1.7
TRAF4-213ENST00000578917 LINC01551Q86U37 167 aa4.42□□□□□ -1.7
TRAF4-213ENST00000578917 NEXN-AS1Q8NBZ9 246 aa4.42□□□□□ -1.7
TRAF4-213ENST00000578917 OR10G8Q8NGN5 311 aa4.42□□□□□ -1.7
TRAF4-213ENST00000578917 UBE2WQ96B02 151 aa4.42□□□□□ -1.7
TRAF4-213ENST00000578917 RMI2Q96E14 147 aa4.42□□□□□ -1.7
TRAF4-213ENST00000578917 DNAJC30Q96LL9 226 aa4.42□□□□□ -1.7
TRAF4-213ENST00000578917 NIT2Q9NQR4 276 aa4.42□□□□□ -1.7
TRAF4-213ENST00000578917 KLK12Q9UKR0 248 aa4.42□□□□□ -1.7
TRAF4-213ENST00000578917 COX11Q9Y6N1 276 aa4.42□□□□□ -1.7
TRAF4-213ENST00000578917 KIF25-AS1Q9Y6Z4 181 aa4.42□□□□□ -1.7
TRAF4-213ENST00000578917 TRBV25-1A0A075B6N4 114 aa4.41□□□□□ -1.7
TRAF4-213ENST00000578917 IGKV2D-24A0A075B6R9 120 aa4.41□□□□□ -1.7
TRAF4-213ENST00000578917 A0A087WTM6 91 aa4.41□□□□□ -1.7
TRAF4-213ENST00000578917 NDUFS6O75380 124 aaKnown RBP4.41□□□□□ -1.7
TRAF4-213ENST00000578917 CRPP02741 224 aa4.41□□□□□ -1.7
TRAF4-213ENST00000578917 ANGP03950 147 aaKnown RBP4.41□□□□□ -1.7
TRAF4-213ENST00000578917 LINC00694P0DN24 101 aa4.41□□□□□ -1.7
TRAF4-213ENST00000578917 CTRLP40313 264 aa4.41□□□□□ -1.7
TRAF4-213ENST00000578917 KRTAP10-2P60368 255 aa4.41□□□□□ -1.7
TRAF4-213ENST00000578917 LAGE3Q14657 143 aa4.41□□□□□ -1.7
TRAF4-213ENST00000578917 Q6ZRN7 208 aaPredicted RBP4.41□□□□□ -1.7
TRAF4-213ENST00000578917 NIT1Q86X76 327 aa4.41□□□□□ -1.7
TRAF4-213ENST00000578917 Q8N3U1 123 aa4.41□□□□□ -1.7
TRAF4-213ENST00000578917 TSKUQ8WUA8 353 aa4.41□□□□□ -1.7
TRAF4-213ENST00000578917 GTSF1Q8WW33 167 aa4.41□□□□□ -1.7
TRAF4-213ENST00000578917 SMDT1Q9H4I9 107 aa4.41□□□□□ -1.7
TRAF4-213ENST00000578917 OSTCQ9NRP0 149 aa4.41□□□□□ -1.7
TRAF4-213ENST00000578917 NAT8Q9UHE5 227 aa4.41□□□□□ -1.7
TRAF4-213ENST00000578917 TRAV26-2A0A0B4J265 109 aa4.4□□□□□ -1.71
TRAF4-213ENST00000578917 IGHV1-24A0A0C4DH33 117 aa4.4□□□□□ -1.71
TRAF4-213ENST00000578917 A0A1B0GUT8 65 aa4.4□□□□□ -1.71
TRAF4-213ENST00000578917 HIGD1CA8MV81 97 aa4.4□□□□□ -1.71
TRAF4-213ENST00000578917 UBE2L6O14933 153 aa4.4□□□□□ -1.71
TRAF4-213ENST00000578917 FOXA3P55318 350 aaPredicted RBP4.4□□□□□ -1.71
TRAF4-213ENST00000578917 SRSF3P84103 164 aaKnown RBP4.4□□□□□ -1.71
TRAF4-213ENST00000578917 Q0VG73 95 aa4.4□□□□□ -1.71
TRAF4-213ENST00000578917 GAGE6Q13070 117 aa4.4□□□□□ -1.71
TRAF4-213ENST00000578917 RIGQ13278 110 aa4.4□□□□□ -1.71
TRAF4-213ENST00000578917 CT83Q5H943 113 aa4.4□□□□□ -1.71
TRAF4-213ENST00000578917 DEFB104AQ8WTQ1 72 aa4.4□□□□□ -1.71
TRAF4-213ENST00000578917 CHCHD7Q9BUK0 85 aa4.4□□□□□ -1.71
TRAF4-213ENST00000578917 GFRA4Q9GZZ7 299 aa4.4□□□□□ -1.71
TRAF4-213ENST00000578917 HECTD4Q9Y4D8 3996 aa4.39□□□□□ -1.71
TRAF4-213ENST00000578917 DNAH2Q9P225 4427 aa4.39□□□□□ -1.71
TRAF4-213ENST00000578917 FAM231BA6NCW3 169 aa4.39□□□□□ -1.71
TRAF4-213ENST00000578917 C9JQL5 133 aa4.39□□□□□ -1.71
TRAF4-213ENST00000578917 LECT2O14960 151 aa4.39□□□□□ -1.71
TRAF4-213ENST00000578917 PMCHP20382 165 aa4.39□□□□□ -1.71
TRAF4-213ENST00000578917 FUSP35637 526 aaKnown RBP eCLIP4.39□□□□□ -1.71
TRAF4-213ENST00000578917 AMTP48728 403 aa4.39□□□□□ -1.71
TRAF4-213ENST00000578917 RPL23P62829 140 aaKnown RBP4.39□□□□□ -1.71
TRAF4-213ENST00000578917 COTL1Q14019 142 aa4.39□□□□□ -1.71
TRAF4-213ENST00000578917 CDPF1Q6NVV7 123 aa4.39□□□□□ -1.71
TRAF4-213ENST00000578917 Q8N976 141 aa4.39□□□□□ -1.71
TRAF4-213ENST00000578917 GATD1Q8NB37 220 aa4.39□□□□□ -1.71
TRAF4-213ENST00000578917 FRZBQ92765 325 aa4.39□□□□□ -1.71
TRAF4-213ENST00000578917 ISOC2Q96AB3 205 aa4.39□□□□□ -1.71
TRAF4-213ENST00000578917 TMEM243Q9BU79 118 aa4.39□□□□□ -1.71
TRAF4-213ENST00000578917 C1orf43Q9BWL3 253 aa4.39□□□□□ -1.71
TRAF4-213ENST00000578917 CNFNQ9BYD5 112 aa4.39□□□□□ -1.71
TRAF4-213ENST00000578917 NAT8BQ9UHF3 227 aa4.39□□□□□ -1.71
TRAF4-213ENST00000578917 DNAH6Q9C0G6 4158 aa4.39□□□□□ -1.71
TRAF4-213ENST00000578917 IGLV5-52A0A0A0MRZ9 124 aa4.38□□□□□ -1.71
TRAF4-213ENST00000578917 GCSHP23434 173 aa4.38□□□□□ -1.71
TRAF4-213ENST00000578917 CAMPP49913 170 aa4.38□□□□□ -1.71
TRAF4-213ENST00000578917 RBX1P62877 108 aa4.38□□□□□ -1.71
TRAF4-213ENST00000578917 MPV17L2Q567V2 206 aa4.38□□□□□ -1.71
TRAF4-213ENST00000578917 AMMECR1LQ6DCA0 310 aa4.38□□□□□ -1.71
TRAF4-213ENST00000578917 ATRAIDQ6UW56 229 aa4.38□□□□□ -1.71
TRAF4-213ENST00000578917 NTM-AS1Q6ZSK4 140 aa4.38□□□□□ -1.71
TRAF4-213ENST00000578917 LINC00269Q8N2A0 174 aa4.38□□□□□ -1.71
TRAF4-213ENST00000578917 BAALCQ8WXS3 180 aa4.38□□□□□ -1.71
TRAF4-213ENST00000578917 CDK2AP2O75956 126 aa4.37□□□□□ -1.71
TRAF4-213ENST00000578917 IQCJQ1A5X6 159 aa4.37□□□□□ -1.71
TRAF4-213ENST00000578917 CLPSL2Q6UWE3 100 aa4.37□□□□□ -1.71
TRAF4-213ENST00000578917 Q8N814 137 aa4.37□□□□□ -1.71
TRAF4-213ENST00000578917 NUP35Q8NFH5 326 aa4.37□□□□□ -1.71
TRAF4-213ENST00000578917 NTN5Q8WTR8 489 aaPredicted RBP4.37□□□□□ -1.71
TRAF4-213ENST00000578917 RPL39LQ96EH5 51 aaKnown RBP4.37□□□□□ -1.71
TRAF4-213ENST00000578917 TMEM191AQ9H0A3 160 aa4.37□□□□□ -1.71
TRAF4-213ENST00000578917 ST20Q9HBF5 79 aa4.37□□□□□ -1.71
TRAF4-213ENST00000578917 V9GYV3 84 aa4.37□□□□□ -1.71
TRAF4-213ENST00000578917 KIAA1109Q2LD37 5005 aa4.37□□□□□ -1.71
TRAF4-213ENST00000578917 PKHD1P08F94 4074 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms