RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 YAE1D1Q9NRH1 226 aa6.82□□□□□ -1.32
CDK5RAP3-208ENST00000578525 IGSF10Q6WRI0 2623 aa6.81□□□□□ -1.32
CDK5RAP3-208ENST00000578525 A0A1B0GWB2 263 aa6.81□□□□□ -1.32
CDK5RAP3-208ENST00000578525 IGLL5B9A064 214 aa6.81□□□□□ -1.32
CDK5RAP3-208ENST00000578525 CCL24O00175 119 aa6.81□□□□□ -1.32
CDK5RAP3-208ENST00000578525 RS1O15537 224 aa6.81□□□□□ -1.32
CDK5RAP3-208ENST00000578525 EMP1P54849 157 aa6.81□□□□□ -1.32
CDK5RAP3-208ENST00000578525 BEAN1Q3B7T3 259 aa6.81□□□□□ -1.32
CDK5RAP3-208ENST00000578525 ODF3L2Q3SX64 289 aa6.81□□□□□ -1.32
CDK5RAP3-208ENST00000578525 HIST2H2BCQ6DN03 193 aa6.81□□□□□ -1.32
CDK5RAP3-208ENST00000578525 HIST2H2BDQ6DRA6 164 aa6.81□□□□□ -1.32
CDK5RAP3-208ENST00000578525 C11orf72Q8NBR9 251 aa6.81□□□□□ -1.32
CDK5RAP3-208ENST00000578525 PLEKHB2Q96CS7 222 aa6.81□□□□□ -1.32
CDK5RAP3-208ENST00000578525 CBY1Q9Y3M2 126 aa6.81□□□□□ -1.32
CDK5RAP3-208ENST00000578525 TNFRSF18Q9Y5U5 241 aa6.81□□□□□ -1.32
CDK5RAP3-208ENST00000578525 USP9XQ93008 2570 aaPredicted RBP6.8□□□□□ -1.32
CDK5RAP3-208ENST00000578525 IGLV4-3A0A075B6K6 122 aa6.8□□□□□ -1.32
CDK5RAP3-208ENST00000578525 IGHV3-73A0A0B4J1V6 119 aa6.8□□□□□ -1.32
CDK5RAP3-208ENST00000578525 A0A1W2PRX2 142 aa6.8□□□□□ -1.32
CDK5RAP3-208ENST00000578525 GAGE12BA1L429 117 aa6.8□□□□□ -1.32
CDK5RAP3-208ENST00000578525 RNASE1P07998 156 aaKnown RBP6.8□□□□□ -1.32
CDK5RAP3-208ENST00000578525 CMC4P56277 68 aaPredicted RBP6.8□□□□□ -1.32
CDK5RAP3-208ENST00000578525 PROK1P58294 105 aa6.8□□□□□ -1.32
CDK5RAP3-208ENST00000578525 TMEM170BQ5T4T1 132 aa6.8□□□□□ -1.32
CDK5RAP3-208ENST00000578525 CFAP126Q5VTH2 177 aa6.8□□□□□ -1.32
CDK5RAP3-208ENST00000578525 SCGB1D4Q6XE38 83 aa6.8□□□□□ -1.32
CDK5RAP3-208ENST00000578525 ZNRF2Q8NHG8 242 aa6.8□□□□□ -1.32
CDK5RAP3-208ENST00000578525 DNAJC30Q96LL9 226 aa6.8□□□□□ -1.32
CDK5RAP3-208ENST00000578525 MRPL16Q9NX20 251 aaKnown RBP6.8□□□□□ -1.32
CDK5RAP3-208ENST00000578525 PYGO1Q9Y3Y4 419 aa6.8□□□□□ -1.32
CDK5RAP3-208ENST00000578525 TSSC4Q9Y5U2 329 aaPredicted RBP6.8□□□□□ -1.32
CDK5RAP3-208ENST00000578525 LEPROTO15243 131 aa6.79□□□□□ -1.32
CDK5RAP3-208ENST00000578525 PLA2G2AP14555 144 aa6.79□□□□□ -1.32
CDK5RAP3-208ENST00000578525 CRYBA4P53673 196 aa6.79□□□□□ -1.32
CDK5RAP3-208ENST00000578525 RBX1P62877 108 aa6.79□□□□□ -1.32
CDK5RAP3-208ENST00000578525 OCIAD2Q56VL3 154 aa6.79□□□□□ -1.32
CDK5RAP3-208ENST00000578525 STHQ8IWL8 128 aa6.79□□□□□ -1.32
CDK5RAP3-208ENST00000578525 OPRPNQ99935 248 aaPredicted RBP6.79□□□□□ -1.32
CDK5RAP3-208ENST00000578525 SPANXB1Q9NS25 103 aaPredicted RBP6.79□□□□□ -1.32
CDK5RAP3-208ENST00000578525 A0A0J9YY99 117 aa6.78□□□□□ -1.32
CDK5RAP3-208ENST00000578525 TMEM238LA0A1B0GVL6 79 aa6.78□□□□□ -1.32
CDK5RAP3-208ENST00000578525 TMEM223A0PJW6 202 aa6.78□□□□□ -1.32
CDK5RAP3-208ENST00000578525 A6NJY4 79 aa6.78□□□□□ -1.32
CDK5RAP3-208ENST00000578525 J3QKU1 62 aa6.78□□□□□ -1.32
CDK5RAP3-208ENST00000578525 IGHV3-53P01767 116 aa6.78□□□□□ -1.32
CDK5RAP3-208ENST00000578525 PRM2P04554 102 aa6.78□□□□□ -1.32
CDK5RAP3-208ENST00000578525 ZNF22P17026 224 aaPredicted RBP6.78□□□□□ -1.32
CDK5RAP3-208ENST00000578525 LGALS3P17931 250 aaKnown RBP6.78□□□□□ -1.32
CDK5RAP3-208ENST00000578525 TSPEAR-AS2P59090 65 aa6.78□□□□□ -1.32
CDK5RAP3-208ENST00000578525 RRN3P1Q2M238 152 aa6.78□□□□□ -1.32
CDK5RAP3-208ENST00000578525 Q6ZSN1 163 aa6.78□□□□□ -1.32
CDK5RAP3-208ENST00000578525 C1orf158Q8N1D5 194 aa6.78□□□□□ -1.32
CDK5RAP3-208ENST00000578525 C11orf44Q8N8P7 122 aa6.78□□□□□ -1.32
CDK5RAP3-208ENST00000578525 IL17DQ8TAD2 202 aa6.78□□□□□ -1.32
CDK5RAP3-208ENST00000578525 ZNF479Q96JC4 524 aa6.78□□□□□ -1.32
CDK5RAP3-208ENST00000578525 AMELXQ99217 191 aa6.78□□□□□ -1.32
CDK5RAP3-208ENST00000578525 CITED2Q99967 270 aaPredicted RBP6.78□□□□□ -1.32
CDK5RAP3-208ENST00000578525 VCX2Q9H322 139 aa6.78□□□□□ -1.32
CDK5RAP3-208ENST00000578525 CFAP46Q8IYW2 2715 aa6.78□□□□□ -1.32
CDK5RAP3-208ENST00000578525 AGRNO00468 2067 aa6.78□□□□□ -1.32
CDK5RAP3-208ENST00000578525 USP24Q9UPU5 2620 aa6.77□□□□□ -1.33
CDK5RAP3-208ENST00000578525 J3QQQ9 107 aa6.77□□□□□ -1.33
CDK5RAP3-208ENST00000578525 SRSF9Q13242 221 aaKnown RBP eCLIP6.77□□□□□ -1.333e-13■■■□□ 16.3
CDK5RAP3-208ENST00000578525 LINC01006Q8NI28 216 aa6.77□□□□□ -1.33
CDK5RAP3-208ENST00000578525 CHCHD7Q9BUK0 85 aa6.77□□□□□ -1.33
CDK5RAP3-208ENST00000578525 SPANXA1Q9NS26 97 aa6.77□□□□□ -1.33
CDK5RAP3-208ENST00000578525 XCL2Q9UBD3 114 aa6.77□□□□□ -1.33
CDK5RAP3-208ENST00000578525 CSPG4Q6UVK1 2322 aa6.77□□□□□ -1.33
CDK5RAP3-208ENST00000578525 SPG11Q96JI7 2443 aa6.77□□□□□ -1.33
CDK5RAP3-208ENST00000578525 ACACBO00763 2458 aa6.76□□□□□ -1.33
CDK5RAP3-208ENST00000578525 ANKRD17O75179 2603 aaKnown RBP6.76□□□□□ -1.33
CDK5RAP3-208ENST00000578525 A0A0J9YXV3 536 aa6.76□□□□□ -1.33
CDK5RAP3-208ENST00000578525 K7ERU9 68 aa6.76□□□□□ -1.33
CDK5RAP3-208ENST00000578525 AZU1P20160 251 aa6.76□□□□□ -1.33
CDK5RAP3-208ENST00000578525 ZNF418Q8TF45 676 aaPredicted RBP6.76□□□□□ -1.33
CDK5RAP3-208ENST00000578525 NDUFA7O95182 113 aa6.75□□□□□ -1.33
CDK5RAP3-208ENST00000578525 UBE2D1P51668 147 aa6.75□□□□□ -1.33
CDK5RAP3-208ENST00000578525 COTL1Q14019 142 aa6.75□□□□□ -1.33
CDK5RAP3-208ENST00000578525 RNF151Q2KHN1 245 aa6.75□□□□□ -1.33
CDK5RAP3-208ENST00000578525 SLC25A29Q8N8R3 303 aa6.75□□□□□ -1.33
CDK5RAP3-208ENST00000578525 FAM104AQ969W3 186 aa6.75□□□□□ -1.33
CDK5RAP3-208ENST00000578525 UBE2D4Q9Y2X8 147 aa6.75□□□□□ -1.33
CDK5RAP3-208ENST00000578525 FBN2P35556 2912 aa6.74□□□□□ -1.33
CDK5RAP3-208ENST00000578525 ZNF462Q96JM2 2506 aa6.74□□□□□ -1.33
CDK5RAP3-208ENST00000578525 IGHV3OR16-12A0A075B7B8 117 aa6.74□□□□□ -1.33
CDK5RAP3-208ENST00000578525 SAP30O75446 220 aa6.74□□□□□ -1.33
CDK5RAP3-208ENST00000578525 MRPS36P82909 103 aaKnown RBP6.74□□□□□ -1.33
CDK5RAP3-208ENST00000578525 FAM110AQ9BQ89 295 aa6.74□□□□□ -1.33
CDK5RAP3-208ENST00000578525 TIMM21Q9BVV7 248 aa6.74□□□□□ -1.33
CDK5RAP3-208ENST00000578525 UBR5O95071 2799 aaPredicted RBP6.74□□□□□ -1.33
CDK5RAP3-208ENST00000578525 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.73□□□□□ -1.33
CDK5RAP3-208ENST00000578525 TRGV1A0A0A0MS02 117 aa6.73□□□□□ -1.33
CDK5RAP3-208ENST00000578525 TRAV4A0A0B4J268 109 aa6.73□□□□□ -1.33
CDK5RAP3-208ENST00000578525 TINCRA0A1B0GVN0 87 aa6.73□□□□□ -1.33
CDK5RAP3-208ENST00000578525 IGKV2-29A2NJV5 120 aaPredicted RBP6.73□□□□□ -1.33
CDK5RAP3-208ENST00000578525 IGLV1-51P01701 117 aa6.73□□□□□ -1.33
CDK5RAP3-208ENST00000578525 IGHV3-30P01768 117 aa6.73□□□□□ -1.33
CDK5RAP3-208ENST00000578525 IGHV3-30-5P0DP03 117 aa6.73□□□□□ -1.33
CDK5RAP3-208ENST00000578525 HILS1P60008 231 aa6.73□□□□□ -1.33
CDK5RAP3-208ENST00000578525 TMEM263Q8WUH6 116 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms