RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 ATP5G1P05496 136 aa9.51□□□□□ -0.89
SRSF1-202ENST00000578430 S100A6P06703 90 aa9.51□□□□□ -0.89
SRSF1-202ENST00000578430 GATA1P15976 413 aaPredicted RBP9.51□□□□□ -0.89
SRSF1-202ENST00000578430 RPL32P62910 135 aaKnown RBP9.51□□□□□ -0.89
SRSF1-202ENST00000578430 COA6Q5JTJ3 125 aaKnown RBP9.51□□□□□ -0.89
SRSF1-202ENST00000578430 DNAJC30Q96LL9 226 aa9.51□□□□□ -0.89
SRSF1-202ENST00000578430 NIT2Q9NQR4 276 aa9.51□□□□□ -0.89
SRSF1-202ENST00000578430 TMA7Q9Y2S6 64 aaKnown RBP9.51□□□□□ -0.89
SRSF1-202ENST00000578430 A0A0J9YWU9 116 aa9.5□□□□□ -0.89
SRSF1-202ENST00000578430 FHL2Q14192 279 aa9.5□□□□□ -0.89
SRSF1-202ENST00000578430 BAGE3Q86Y29 109 aa9.5□□□□□ -0.89
SRSF1-202ENST00000578430 ST20Q9HBF5 79 aa9.5□□□□□ -0.89
SRSF1-202ENST00000578430 NXT2Q9NPJ8 142 aaKnown RBP9.5□□□□□ -0.89
SRSF1-202ENST00000578430 KMT2CQ8NEZ4 4911 aaKnown RBP9.49□□□□□ -0.89
SRSF1-202ENST00000578430 K7EQD1 137 aa9.49□□□□□ -0.89
SRSF1-202ENST00000578430 GAS8-AS1O95177 125 aa9.49□□□□□ -0.89
SRSF1-202ENST00000578430 NDUFA6P56556 154 aa9.49□□□□□ -0.89
SRSF1-202ENST00000578430 SUMO2P61956 95 aaKnown RBP9.49□□□□□ -0.89
SRSF1-202ENST00000578430 RHOHQ15669 191 aa9.49□□□□□ -0.89
SRSF1-202ENST00000578430 Q6ZSN1 163 aa9.49□□□□□ -0.89
SRSF1-202ENST00000578430 PMCHP20382 165 aa9.48□□□□□ -0.89
SRSF1-202ENST00000578430 LORP23490 312 aaPredicted RBP9.48□□□□□ -0.89
SRSF1-202ENST00000578430 C12orf74Q32Q52 190 aa9.48□□□□□ -0.89
SRSF1-202ENST00000578430 PRSS3P2Q8NHM4 247 aa9.48□□□□□ -0.89
SRSF1-202ENST00000578430 C11orf45Q8TAV5 145 aa9.48□□□□□ -0.89
SRSF1-202ENST00000578430 CHCHD1Q96BP2 118 aaKnown RBP9.48□□□□□ -0.89
SRSF1-202ENST00000578430 RPL39LQ96EH5 51 aaKnown RBP9.48□□□□□ -0.89
SRSF1-202ENST00000578430 PRADC1Q9BSG0 188 aa9.48□□□□□ -0.89
SRSF1-202ENST00000578430 PRO0255Q9UI72 69 aa9.48□□□□□ -0.89
SRSF1-202ENST00000578430 HHLA3Q9XRX5 114 aa9.48□□□□□ -0.89
SRSF1-202ENST00000578430 TNFRSF18Q9Y5U5 241 aa9.48□□□□□ -0.89
SRSF1-202ENST00000578430 K7EMI3 77 aa9.47□□□□□ -0.89
SRSF1-202ENST00000578430 VCYO14598 125 aa9.47□□□□□ -0.89
SRSF1-202ENST00000578430 TCAPO15273 167 aa9.47□□□□□ -0.89
SRSF1-202ENST00000578430 RPL36AP83881 106 aaKnown RBP9.47□□□□□ -0.89
SRSF1-202ENST00000578430 IQCJQ1A5X6 159 aa9.47□□□□□ -0.89
SRSF1-202ENST00000578430 FA2HQ7L5A8 372 aa9.47□□□□□ -0.89
SRSF1-202ENST00000578430 Q8N8P6 123 aa9.47□□□□□ -0.89
SRSF1-202ENST00000578430 SLC25A29Q8N8R3 303 aa9.47□□□□□ -0.89
SRSF1-202ENST00000578430 RPL36ALQ969Q0 106 aaKnown RBP9.47□□□□□ -0.89
SRSF1-202ENST00000578430 SMIM2Q9BVW6 85 aa9.47□□□□□ -0.89
SRSF1-202ENST00000578430 TRBV27A0A0K0K1C4 114 aa9.46□□□□□ -0.9
SRSF1-202ENST00000578430 LINC00614P0C842 121 aa9.46□□□□□ -0.9
SRSF1-202ENST00000578430 ESDP10768 282 aa9.46□□□□□ -0.9
SRSF1-202ENST00000578430 CRYBA4P53673 196 aa9.46□□□□□ -0.9
SRSF1-202ENST00000578430 POLR2KP53803 58 aaKnown RBP9.46□□□□□ -0.9
SRSF1-202ENST00000578430 NIT1Q86X76 327 aa9.46□□□□□ -0.9
SRSF1-202ENST00000578430 NEXN-AS1Q8NBZ9 246 aa9.46□□□□□ -0.9
SRSF1-202ENST00000578430 TMEM70Q9BUB7 260 aa9.46□□□□□ -0.9
SRSF1-202ENST00000578430 DNAH9Q9NYC9 4486 aa9.45□□□□□ -0.9
SRSF1-202ENST00000578430 TRBV7-3A0A075B6L6 115 aa9.45□□□□□ -0.9
SRSF1-202ENST00000578430 LOC389332A0A1B0GUA5 103 aa9.45□□□□□ -0.9
SRSF1-202ENST00000578430 SDHAF1A6NFY7 115 aa9.45□□□□□ -0.9
SRSF1-202ENST00000578430 LINC01546A6NGU7 62 aa9.45□□□□□ -0.9
SRSF1-202ENST00000578430 SERF1AO75920 110 aa9.45□□□□□ -0.9
SRSF1-202ENST00000578430 HOXA5P20719 270 aa9.45□□□□□ -0.9
SRSF1-202ENST00000578430 IFI27P40305 119 aaPredicted RBP9.45□□□□□ -0.9
SRSF1-202ENST00000578430 AP5S1Q9NUS5 200 aa9.45□□□□□ -0.9
SRSF1-202ENST00000578430 HUWE1Q7Z6Z7 4374 aaKnown RBP9.44□□□□□ -0.9
SRSF1-202ENST00000578430 IGLV2-18A0A075B6J9 118 aa9.44□□□□□ -0.9
SRSF1-202ENST00000578430 C5orf52A6NGY3 159 aa9.44□□□□□ -0.9
SRSF1-202ENST00000578430 F5H768 121 aa9.44□□□□□ -0.9
SRSF1-202ENST00000578430 P0DMU3 169 aa9.44□□□□□ -0.9
SRSF1-202ENST00000578430 FAM231AP0DMU4 169 aa9.44□□□□□ -0.9
SRSF1-202ENST00000578430 FAM231CP0DMU5 169 aa9.44□□□□□ -0.9
SRSF1-202ENST00000578430 KIR2DL4Q99706 377 aa9.44□□□□□ -0.9
SRSF1-202ENST00000578430 TENM3Q9P273 2699 aa9.44□□□□□ -0.9
SRSF1-202ENST00000578430 RYR3Q15413 4870 aa9.43□□□□□ -0.9
SRSF1-202ENST00000578430 H3BNG1 76 aa9.43□□□□□ -0.9
SRSF1-202ENST00000578430 I3L3M4 83 aa9.43□□□□□ -0.9
SRSF1-202ENST00000578430 PAX4O43316 350 aa9.43□□□□□ -0.9
SRSF1-202ENST00000578430 HSBP1O75506 76 aa9.43□□□□□ -0.9
SRSF1-202ENST00000578430 SNRPEP62304 92 aaKnown RBP9.43□□□□□ -0.9
SRSF1-202ENST00000578430 RNASEKQ6P5S7 137 aaKnown RBP9.43□□□□□ -0.9
SRSF1-202ENST00000578430 Q6ZTC4 211 aa9.43□□□□□ -0.9
SRSF1-202ENST00000578430 DAZ4Q86SG3 579 aaKnown RBP9.43□□□□□ -0.9
SRSF1-202ENST00000578430 ZNRF2Q8NHG8 242 aa9.43□□□□□ -0.9
SRSF1-202ENST00000578430 URB1-AS1Q96HZ7 61 aa9.43□□□□□ -0.9
SRSF1-202ENST00000578430 DAZ3Q9NR90 486 aaKnown RBP9.43□□□□□ -0.9
SRSF1-202ENST00000578430 G0S2P27469 103 aa9.42□□□□□ -0.9
SRSF1-202ENST00000578430 LINC00310P59036 64 aa9.42□□□□□ -0.9
SRSF1-202ENST00000578430 NANOS2P60321 138 aaKnown RBP9.42□□□□□ -0.9
SRSF1-202ENST00000578430 UBE2D3P61077 147 aa9.42□□□□□ -0.9
SRSF1-202ENST00000578430 UBE2D2P62837 147 aa9.42□□□□□ -0.9
SRSF1-202ENST00000578430 ORMDL2Q53FV1 153 aa9.42□□□□□ -0.9
SRSF1-202ENST00000578430 TRAV10A0A0B4J240 114 aa9.41□□□□□ -0.9
SRSF1-202ENST00000578430 GAGE12JA6NER3 117 aa9.41□□□□□ -0.9
SRSF1-202ENST00000578430 LINC01549A6NIU2 74 aa9.41□□□□□ -0.9
SRSF1-202ENST00000578430 LINC00694P0DN24 101 aa9.41□□□□□ -0.9
SRSF1-202ENST00000578430 HTN3P15516 51 aa9.41□□□□□ -0.9
SRSF1-202ENST00000578430 GAGE1Q13065 139 aa9.41□□□□□ -0.9
SRSF1-202ENST00000578430 GAGE4Q13068 117 aa9.41□□□□□ -0.9
SRSF1-202ENST00000578430 GAGE5Q13069 117 aa9.41□□□□□ -0.9
SRSF1-202ENST00000578430 LAGE3Q14657 143 aa9.41□□□□□ -0.9
SRSF1-202ENST00000578430 GAGE13Q4V321 117 aa9.41□□□□□ -0.9
SRSF1-202ENST00000578430 TMEM97Q5BJF2 176 aa9.41□□□□□ -0.9
SRSF1-202ENST00000578430 SH2D6Q7Z4S9 175 aa9.41□□□□□ -0.9
SRSF1-202ENST00000578430 PACRGQ96M98 296 aaPredicted RBP9.41□□□□□ -0.9
SRSF1-202ENST00000578430 COL7A1Q02388 2944 aa9.4□□□□□ -0.9
SRSF1-202ENST00000578430 TRAV26-1A0A087WT03 109 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms