RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 FAM159AQ6UWV7 190 aa2.52□□□□□ -2.01
PTPRM-206ENST00000578093 C14orf178Q8N769 122 aaPredicted RBP2.52□□□□□ -2.01
PTPRM-206ENST00000578093 ATP6V0E2Q8NHE4 81 aa2.52□□□□□ -2.01
PTPRM-206ENST00000578093 MITD1Q8WV92 249 aa2.52□□□□□ -2.01
PTPRM-206ENST00000578093 C14orf144Q96I85 54 aa2.52□□□□□ -2.01
PTPRM-206ENST00000578093 NPCDR1Q9BY65 106 aa2.52□□□□□ -2.01
PTPRM-206ENST00000578093 SAMD10Q9BYL1 202 aa2.52□□□□□ -2.01
PTPRM-206ENST00000578093 NKX6-2Q9C056 277 aaPredicted RBP2.52□□□□□ -2.01
PTPRM-206ENST00000578093 GTSF1LQ9H1H1 148 aa2.52□□□□□ -2.01
PTPRM-206ENST00000578093 GPN1Q9HCN4 374 aaPredicted RBP2.52□□□□□ -2.01
PTPRM-206ENST00000578093 TRAV8-3A0A0A6YYJ7 113 aa2.51□□□□□ -2.01
PTPRM-206ENST00000578093 RBAKDNA6NC62 111 aa2.51□□□□□ -2.01
PTPRM-206ENST00000578093 OR7C2O60412 319 aa2.51□□□□□ -2.01
PTPRM-206ENST00000578093 APOC3P02656 99 aa2.51□□□□□ -2.01
PTPRM-206ENST00000578093 PFN1P07737 140 aaKnown RBP2.51□□□□□ -2.01
PTPRM-206ENST00000578093 RNASE3P12724 160 aaKnown RBP2.51□□□□□ -2.01
PTPRM-206ENST00000578093 SULT1A1P50225 295 aa2.51□□□□□ -2.01
PTPRM-206ENST00000578093 S100A10P60903 97 aa2.51□□□□□ -2.01
PTPRM-206ENST00000578093 RANP62826 216 aaKnown RBP2.51□□□□□ -2.01
PTPRM-206ENST00000578093 GNG5P63218 68 aa2.51□□□□□ -2.01
PTPRM-206ENST00000578093 UBE2L3P68036 154 aaKnown RBP2.51□□□□□ -2.01
PTPRM-206ENST00000578093 RAB31Q13636 194 aa2.51□□□□□ -2.01
PTPRM-206ENST00000578093 ZNF876PQ49A33 203 aa2.51□□□□□ -2.01
PTPRM-206ENST00000578093 ATRAIDQ6UW56 229 aa2.51□□□□□ -2.01
PTPRM-206ENST00000578093 SH2D6Q7Z4S9 175 aa2.51□□□□□ -2.01
PTPRM-206ENST00000578093 NIT1Q86X76 327 aa2.51□□□□□ -2.01
PTPRM-206ENST00000578093 SVBPQ8N300 66 aa2.51□□□□□ -2.01
PTPRM-206ENST00000578093 TMEM252Q8N6L7 170 aa2.51□□□□□ -2.01
PTPRM-206ENST00000578093 UBE2WQ96B02 151 aa2.51□□□□□ -2.01
PTPRM-206ENST00000578093 SGK494Q96LW2 274 aa2.51□□□□□ -2.01
PTPRM-206ENST00000578093 C9orf85Q96MD7 179 aa2.51□□□□□ -2.01
PTPRM-206ENST00000578093 SDHCQ99643 169 aaPredicted RBP2.51□□□□□ -2.01
PTPRM-206ENST00000578093 PRADC1Q9BSG0 188 aa2.51□□□□□ -2.01
PTPRM-206ENST00000578093 PAXXQ9BUH6 204 aa2.51□□□□□ -2.01
PTPRM-206ENST00000578093 MED28Q9H204 178 aa2.51□□□□□ -2.01
PTPRM-206ENST00000578093 PARLQ9H300 379 aa2.51□□□□□ -2.01
PTPRM-206ENST00000578093 JPT2Q9H910 190 aa2.51□□□□□ -2.01
PTPRM-206ENST00000578093 SDF2L1Q9HCN8 221 aa2.51□□□□□ -2.01
PTPRM-206ENST00000578093 LYRM2Q9NU23 88 aaPredicted RBP2.51□□□□□ -2.01
PTPRM-206ENST00000578093 KLK12Q9UKR0 248 aa2.51□□□□□ -2.01
PTPRM-206ENST00000578093 TRAV21A0A0B4J279 112 aa2.5□□□□□ -2.01
PTPRM-206ENST00000578093 C5orf52A6NGY3 159 aa2.5□□□□□ -2.01
PTPRM-206ENST00000578093 GGTLC3B5MD39 225 aa2.5□□□□□ -2.01
PTPRM-206ENST00000578093 GAS8-AS1O95177 125 aa2.5□□□□□ -2.01
PTPRM-206ENST00000578093 CHTF8P0CG12 524 aa2.5□□□□□ -2.01
PTPRM-206ENST00000578093 S100A2P29034 98 aa2.5□□□□□ -2.01
PTPRM-206ENST00000578093 DDTP30046 118 aa2.5□□□□□ -2.01
PTPRM-206ENST00000578093 S100A11P31949 105 aa2.5□□□□□ -2.01
PTPRM-206ENST00000578093 INPP1P49441 399 aa2.5□□□□□ -2.01
PTPRM-206ENST00000578093 FHITP49789 147 aa2.5□□□□□ -2.01
PTPRM-206ENST00000578093 IL15RAQ13261 267 aa2.5□□□□□ -2.01
PTPRM-206ENST00000578093 ACOT6Q3I5F7 207 aaPredicted RBP2.5□□□□□ -2.01
PTPRM-206ENST00000578093 UFSP1Q6NVU6 142 aa2.5□□□□□ -2.01
PTPRM-206ENST00000578093 UQCC3Q6UW78 93 aa2.5□□□□□ -2.01
PTPRM-206ENST00000578093 Q6ZRU5 148 aa2.5□□□□□ -2.01
PTPRM-206ENST00000578093 GOLT1AQ6ZVE7 132 aa2.5□□□□□ -2.01
PTPRM-206ENST00000578093 SMIM29Q86T20 159 aa2.5□□□□□ -2.01
PTPRM-206ENST00000578093 MRPL52Q86TS9 123 aaKnown RBP2.5□□□□□ -2.01
PTPRM-206ENST00000578093 Q8N976 141 aa2.5□□□□□ -2.01
PTPRM-206ENST00000578093 OR2T35Q8NGX2 323 aa2.5□□□□□ -2.01
PTPRM-206ENST00000578093 ASB13Q8WXK3 278 aa2.5□□□□□ -2.01
PTPRM-206ENST00000578093 LINC00479Q96M42 142 aa2.5□□□□□ -2.01
PTPRM-206ENST00000578093 C20orf85Q9H1P6 137 aa2.5□□□□□ -2.01
PTPRM-206ENST00000578093 LENEPQ9Y5L5 61 aa2.5□□□□□ -2.01
PTPRM-206ENST00000578093 FAM240BA0A1B0GVZ2 78 aa2.49□□□□□ -2.01
PTPRM-206ENST00000578093 FAM74A7A6NL05 159 aa2.49□□□□□ -2.01
PTPRM-206ENST00000578093 DLEU1O43261 78 aa2.49□□□□□ -2.01
PTPRM-206ENST00000578093 HLA-DQA1P01909 254 aa2.49□□□□□ -2.01
PTPRM-206ENST00000578093 STAG3L3P0CL85 134 aa2.49□□□□□ -2.01
PTPRM-206ENST00000578093 MGST1P10620 155 aaKnown RBP2.49□□□□□ -2.01
PTPRM-206ENST00000578093 CSN1S1P47710 185 aa2.49□□□□□ -2.01
PTPRM-206ENST00000578093 PEA15Q15121 130 aa2.49□□□□□ -2.01
PTPRM-206ENST00000578093 FAM74A3Q4VXF1 159 aa2.49□□□□□ -2.01
PTPRM-206ENST00000578093 MPV17L2Q567V2 206 aa2.49□□□□□ -2.01
PTPRM-206ENST00000578093 KRTAP26-1Q6PEX3 210 aa2.49□□□□□ -2.01
PTPRM-206ENST00000578093 CLPSL2Q6UWE3 100 aa2.49□□□□□ -2.01
PTPRM-206ENST00000578093 ENHOQ6UWT2 76 aa2.49□□□□□ -2.01
PTPRM-206ENST00000578093 STPG4Q8N801 248 aa2.49□□□□□ -2.01
PTPRM-206ENST00000578093 CYB561D1Q8N8Q1 229 aa2.49□□□□□ -2.01
PTPRM-206ENST00000578093 C9orf163Q8N9P6 203 aa2.49□□□□□ -2.01
PTPRM-206ENST00000578093 OR2D3Q8NGH3 330 aa2.49□□□□□ -2.01
PTPRM-206ENST00000578093 OR5C1Q8NGR4 320 aa2.49□□□□□ -2.01
PTPRM-206ENST00000578093 C2orf50Q96LR7 162 aa2.49□□□□□ -2.01
PTPRM-206ENST00000578093 MARVELD1Q9BSK0 173 aa2.49□□□□□ -2.01
PTPRM-206ENST00000578093 WDR61Q9GZS3 305 aaKnown RBP2.49□□□□□ -2.01
PTPRM-206ENST00000578093 OR5AC2Q9NZP5 309 aa2.49□□□□□ -2.01
PTPRM-206ENST00000578093 IGKV3D-20A0A0C4DH25 116 aa2.48□□□□□ -2.01
PTPRM-206ENST00000578093 SERTM2A0A1B0GWG4 89 aa2.48□□□□□ -2.01
PTPRM-206ENST00000578093 TMEM218A2RU14 115 aa2.48□□□□□ -2.01
PTPRM-206ENST00000578093 XKRY2A2RUG3 117 aa2.48□□□□□ -2.01
PTPRM-206ENST00000578093 PGPA6NDG6 321 aa2.48□□□□□ -2.01
PTPRM-206ENST00000578093 NAP1L6A6NFF2 107 aa2.48□□□□□ -2.01
PTPRM-206ENST00000578093 SMIM1B2RUZ4 78 aa2.48□□□□□ -2.01
PTPRM-206ENST00000578093 INMT-MINDY4F8WBC2 141 aa2.48□□□□□ -2.01
PTPRM-206ENST00000578093 PHOX2AO14813 284 aa2.48□□□□□ -2.01
PTPRM-206ENST00000578093 HMGB3O15347 200 aaKnown RBP2.48□□□□□ -2.01
PTPRM-206ENST00000578093 PLA2G10O15496 165 aa2.48□□□□□ -2.01
PTPRM-206ENST00000578093 SIX6O95475 246 aa2.48□□□□□ -2.01
PTPRM-206ENST00000578093 MPC2O95563 127 aa2.48□□□□□ -2.01
PTPRM-206ENST00000578093 GCGP01275 180 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms