RNA–Protein interactions for RNA: ENST00000577052.5

ABR-236, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 617 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-236ENST00000577052 UFSP1Q6NVU6 142 aa12.06□□□□□ -0.48
ABR-236ENST00000577052 GAGE12BA1L429 117 aa12.05□□□□□ -0.48
ABR-236ENST00000577052 C1orf196B1AJZ1 125 aa12.05□□□□□ -0.48
ABR-236ENST00000577052 GAGE7O76087 117 aa12.05□□□□□ -0.48
ABR-236ENST00000577052 MGPP08493 103 aa12.05□□□□□ -0.48
ABR-236ENST00000577052 GAGE12FP0CL80 117 aa12.05□□□□□ -0.48
ABR-236ENST00000577052 GAGE12GP0CL81 117 aa12.05□□□□□ -0.48
ABR-236ENST00000577052 GAGE12IP0CL82 117 aa12.05□□□□□ -0.48
ABR-236ENST00000577052 FAM74A4Q5TZK3 123 aa12.05□□□□□ -0.48
ABR-236ENST00000577052 SMIM17P0DL12 118 aa12.04□□□□□ -0.48
ABR-236ENST00000577052 APOBP04114 4563 aaKnown RBP12.03□□□□□ -0.48
ABR-236ENST00000577052 TRAV26-2A0A0B4J265 109 aa12.03□□□□□ -0.48
ABR-236ENST00000577052 TRAV4A0A0B4J268 109 aa12.03□□□□□ -0.48
ABR-236ENST00000577052 LYRM9A8MSI8 78 aa12.03□□□□□ -0.48
ABR-236ENST00000577052 D6R8Y8 96 aa12.03□□□□□ -0.48
ABR-236ENST00000577052 SMKR1H3BMG3 65 aa12.03□□□□□ -0.48
ABR-236ENST00000577052 GAS8-AS1O95177 125 aa12.03□□□□□ -0.48
ABR-236ENST00000577052 NCR2O95944 276 aa12.03□□□□□ -0.48
ABR-236ENST00000577052 UBE2DNLQ8IWF7 75 aa12.03□□□□□ -0.48
ABR-236ENST00000577052 IGHV3-73A0A0B4J1V6 119 aa12.02□□□□□ -0.49
ABR-236ENST00000577052 HIST1H2BKO60814 126 aa12.02□□□□□ -0.49
ABR-236ENST00000577052 HIST1H2BJP06899 126 aa12.02□□□□□ -0.49
ABR-236ENST00000577052 HIST1H2BOP23527 126 aa12.02□□□□□ -0.49
ABR-236ENST00000577052 SRIP30626 198 aa12.02□□□□□ -0.49
ABR-236ENST00000577052 HIST1H2BBP33778 126 aa12.02□□□□□ -0.49
ABR-236ENST00000577052 HIST1H2BDP58876 126 aa12.02□□□□□ -0.49
ABR-236ENST00000577052 HIST1H2BCP62807 126 aa12.02□□□□□ -0.49
ABR-236ENST00000577052 HIST2H2BEQ16778 126 aa12.02□□□□□ -0.49
ABR-236ENST00000577052 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.02□□□□□ -0.49
ABR-236ENST00000577052 SUMO4Q6EEV6 95 aa12.02□□□□□ -0.49
ABR-236ENST00000577052 HIST1H2BHQ93079 126 aa12.02□□□□□ -0.49
ABR-236ENST00000577052 ZNF479Q96JC4 524 aa12.02□□□□□ -0.49
ABR-236ENST00000577052 C18orf15Q96N68 181 aa12.02□□□□□ -0.49
ABR-236ENST00000577052 HIST1H2BNQ99877 126 aa12.02□□□□□ -0.49
ABR-236ENST00000577052 HIST1H2BMQ99879 126 aa12.02□□□□□ -0.49
ABR-236ENST00000577052 ALKBH7Q9BT30 221 aaPredicted RBP12.02□□□□□ -0.49
ABR-236ENST00000577052 RHODO00212 210 aa12.01□□□□□ -0.49
ABR-236ENST00000577052 IGHV3-53P01767 116 aa12.01□□□□□ -0.49
ABR-236ENST00000577052 HTN3P15516 51 aa12.01□□□□□ -0.49
ABR-236ENST00000577052 RAB5BP61020 215 aa12.01□□□□□ -0.49
ABR-236ENST00000577052 TNP2Q05952 138 aa12.01□□□□□ -0.49
ABR-236ENST00000577052 ZNF56Q15929 161 aa12.01□□□□□ -0.49
ABR-236ENST00000577052 OR4C5Q8NGB2 326 aa12.01□□□□□ -0.49
ABR-236ENST00000577052 MRAP2Q96G30 205 aa12.01□□□□□ -0.49
ABR-236ENST00000577052 TMA7Q9Y2S6 64 aaKnown RBP12.01□□□□□ -0.49
ABR-236ENST00000577052 TRGV2A0A075B6R0 118 aa12□□□□□ -0.49
ABR-236ENST00000577052 DEFB130BP0DP73 79 aa12□□□□□ -0.49
ABR-236ENST00000577052 DEFB130AP0DP74 79 aa12□□□□□ -0.49
ABR-236ENST00000577052 GATA1P15976 413 aaPredicted RBP12□□□□□ -0.49
ABR-236ENST00000577052 C1orf134Q5TEV5 83 aa12□□□□□ -0.49
ABR-236ENST00000577052 ZFP2Q6ZN57 461 aa12□□□□□ -0.49
ABR-236ENST00000577052 ORMDL3Q8N138 153 aa12□□□□□ -0.49
ABR-236ENST00000577052 NPYP01303 97 aa11.99□□□□□ -0.49
ABR-236ENST00000577052 CKS2P33552 79 aa11.99□□□□□ -0.49
ABR-236ENST00000577052 Q6ZSN1 163 aa11.99□□□□□ -0.49
ABR-236ENST00000577052 NRACQ8N912 160 aa11.99□□□□□ -0.49
ABR-236ENST00000577052 DNAH5Q8TE73 4624 aa11.99□□□□□ -0.49
ABR-236ENST00000577052 F5H697 171 aa11.98□□□□□ -0.49
ABR-236ENST00000577052 PPBPP02775 128 aa11.98□□□□□ -0.49
ABR-236ENST00000577052 PRELID3AQ96N28 172 aa11.98□□□□□ -0.49
ABR-236ENST00000577052 M0QY20 66 aa11.97□□□□□ -0.49
ABR-236ENST00000577052 IQCJQ1A5X6 159 aa11.97□□□□□ -0.49
ABR-236ENST00000577052 C18orf32Q8TCD1 76 aa11.97□□□□□ -0.49
ABR-236ENST00000577052 RPL39LQ96EH5 51 aaKnown RBP11.97□□□□□ -0.49
ABR-236ENST00000577052 TEX48A0A1B0GUV7 120 aa11.96□□□□□ -0.49
ABR-236ENST00000577052 TNFRSF6BO95407 300 aa11.96□□□□□ -0.49
ABR-236ENST00000577052 DAD1P61803 113 aa11.96□□□□□ -0.49
ABR-236ENST00000577052 FHL2Q14192 279 aa11.95□□□□□ -0.5
ABR-236ENST00000577052 ZNRF2Q8NHG8 242 aa11.95□□□□□ -0.5
ABR-236ENST00000577052 LAMTOR2Q9Y2Q5 125 aa11.95□□□□□ -0.5
ABR-236ENST00000577052 C16orf90A8MZG2 172 aa11.94□□□□□ -0.5
ABR-236ENST00000577052 CIDEAO60543 219 aa11.94□□□□□ -0.5
ABR-236ENST00000577052 CDK2AP2O75956 126 aa11.94□□□□□ -0.5
ABR-236ENST00000577052 Q0VG73 95 aa11.94□□□□□ -0.5
ABR-236ENST00000577052 OR10J3Q5JRS4 329 aa11.94□□□□□ -0.5
ABR-236ENST00000577052 HOXA5P20719 270 aa11.93□□□□□ -0.5
ABR-236ENST00000577052 LINC00310P59036 64 aa11.93□□□□□ -0.5
ABR-236ENST00000577052 Q9UF83 564 aa11.93□□□□□ -0.5
ABR-236ENST00000577052 TRGV4A0A0C4DH28 118 aa11.92□□□□□ -0.5
ABR-236ENST00000577052 NBDYA0A0U1RRE5 68 aa11.92□□□□□ -0.5
ABR-236ENST00000577052 H7C1H1 209 aa11.92□□□□□ -0.5
ABR-236ENST00000577052 K7EQD1 137 aa11.92□□□□□ -0.5
ABR-236ENST00000577052 MAPKAPK5-AS1Q8N8E1 139 aa11.92□□□□□ -0.5
ABR-236ENST00000577052 TRBV6-5A0A0K0K1A5 114 aa11.91□□□□□ -0.5
ABR-236ENST00000577052 NDUFA6P56556 154 aa11.91□□□□□ -0.5
ABR-236ENST00000577052 COA6Q5JTJ3 125 aaKnown RBP11.91□□□□□ -0.5
ABR-236ENST00000577052 SLC25A29Q8N8R3 303 aa11.91□□□□□ -0.5
ABR-236ENST00000577052 NEXN-AS1Q8NBZ9 246 aa11.91□□□□□ -0.5
ABR-236ENST00000577052 URB1-AS1Q96HZ7 61 aa11.91□□□□□ -0.5
ABR-236ENST00000577052 MAP1LC3AQ9H492 121 aa11.91□□□□□ -0.5
ABR-236ENST00000577052 LOC389332A0A1B0GUA5 103 aa11.9□□□□□ -0.5
ABR-236ENST00000577052 PRSS47A8MTI9 375 aa11.9□□□□□ -0.5
ABR-236ENST00000577052 PPP1R17O96001 155 aa11.9□□□□□ -0.5
ABR-236ENST00000577052 ATP5G1P05496 136 aa11.9□□□□□ -0.5
ABR-236ENST00000577052 SUMO2P61956 95 aaKnown RBP11.9□□□□□ -0.5
ABR-236ENST00000577052 C15orf53Q8NAA6 179 aa11.9□□□□□ -0.5
ABR-236ENST00000577052 C20orf78Q9BR46 151 aa11.9□□□□□ -0.5
ABR-236ENST00000577052 NIT2Q9NQR4 276 aa11.9□□□□□ -0.5
ABR-236ENST00000577052 TRBV6-4A0A1B0GX49 114 aa11.89□□□□□ -0.51
ABR-236ENST00000577052 BAGE3Q86Y29 109 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms