RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	SPAG8	Q99932	426 aa	Predicted RBP	11.03	□□□□□ -0.64
PRPF8-216	ENST00000577001	DEFB131A	P59861	70 aa		11.02	□□□□□ -0.65
PRPF8-216	ENST00000577001		Q1RN00	199 aa		11.02	□□□□□ -0.65
PRPF8-216	ENST00000577001	UBE2E2	Q96LR5	201 aa		11.02	□□□□□ -0.65
PRPF8-216	ENST00000577001	ITPR2	Q14571	2701 aa		11.02	□□□□□ -0.65
PRPF8-216	ENST00000577001	IGHG2	P01859	326 aa		11.02	□□□□□ -0.65
PRPF8-216	ENST00000577001	PLN	P26678	52 aa		11.02	□□□□□ -0.65
PRPF8-216	ENST00000577001	SIVA1	O15304	175 aa		11.01	□□□□□ -0.65
PRPF8-216	ENST00000577001	FOXI2	Q6ZQN5	318 aa		11.01	□□□□□ -0.65
PRPF8-216	ENST00000577001	TMEM238	C9JI98	176 aa		11.01	□□□□□ -0.65
PRPF8-216	ENST00000577001	MRAP2	Q96G30	205 aa		11.01	□□□□□ -0.65
PRPF8-216	ENST00000577001	SETX	Q7Z333	2677 aa	Known RBP	11.01	□□□□□ -0.65
PRPF8-216	ENST00000577001		A6NDX4	124 aa		11	□□□□□ -0.65
PRPF8-216	ENST00000577001	MORN3	Q6PF18	240 aa	Predicted RBP	11	□□□□□ -0.65
PRPF8-216	ENST00000577001	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	10.99	□□□□□ -0.65
PRPF8-216	ENST00000577001	IGKV3OR2-268	A0A0C4DH90	116 aa		10.99	□□□□□ -0.65
PRPF8-216	ENST00000577001	IGKV2-29	A2NJV5	120 aa	Predicted RBP	10.99	□□□□□ -0.65
PRPF8-216	ENST00000577001	RRN3P1	Q2M238	152 aa		10.99	□□□□□ -0.65
PRPF8-216	ENST00000577001	TRBV7-3	A0A075B6L6	115 aa		10.99	□□□□□ -0.65
PRPF8-216	ENST00000577001		E9PLD3	99 aa		10.99	□□□□□ -0.65
PRPF8-216	ENST00000577001	TRPT1	Q86TN4	253 aa	Known RBP	10.99	□□□□□ -0.65
PRPF8-216	ENST00000577001	OR5A1	Q8NGJ0	315 aa		10.99	□□□□□ -0.65
PRPF8-216	ENST00000577001	APC	P25054	2843 aa		10.99	□□□□□ -0.65
PRPF8-216	ENST00000577001	LINC00315	P59091	139 aa		10.99	□□□□□ -0.65
PRPF8-216	ENST00000577001	DCANP1	Q8TF63	244 aa		10.99	□□□□□ -0.65
PRPF8-216	ENST00000577001	RBMY1A1	P0DJD3	496 aa	Known RBP	10.98	□□□□□ -0.65
PRPF8-216	ENST00000577001	RBMY1C	P0DJD4	496 aa		10.98	□□□□□ -0.65
PRPF8-216	ENST00000577001	RBMY1F	Q15415	496 aa	Known RBP	10.98	□□□□□ -0.65
PRPF8-216	ENST00000577001	CFHR3	Q02985	330 aa		10.98	□□□□□ -0.65
PRPF8-216	ENST00000577001	SAMD13	Q5VXD3	122 aa		10.98	□□□□□ -0.65
PRPF8-216	ENST00000577001	TM2D2	Q9BX73	214 aa		10.98	□□□□□ -0.65
PRPF8-216	ENST00000577001	ID1	P41134	155 aa		10.97	□□□□□ -0.65
PRPF8-216	ENST00000577001	IGLV4-69	A0A075B6H9	119 aa		10.97	□□□□□ -0.65
PRPF8-216	ENST00000577001	HOXD3	P31249	432 aa	Predicted RBP	10.97	□□□□□ -0.65
PRPF8-216	ENST00000577001	CRIP2	P52943	208 aa	Predicted RBP	10.97	□□□□□ -0.65
PRPF8-216	ENST00000577001	TCTEX1D4	Q5JR98	221 aa		10.97	□□□□□ -0.65
PRPF8-216	ENST00000577001	SPANXB1	Q9NS25	103 aa	Predicted RBP	10.97	□□□□□ -0.65
PRPF8-216	ENST00000577001	FASN	P49327	2511 aa	Known RBP	10.97	□□□□□ -0.65
PRPF8-216	ENST00000577001	LGALS3	P17931	250 aa	Known RBP	10.97	□□□□□ -0.65
PRPF8-216	ENST00000577001	XCL2	Q9UBD3	114 aa		10.97	□□□□□ -0.65
PRPF8-216	ENST00000577001	TSPAN13	O95857	204 aa		10.96	□□□□□ -0.65
PRPF8-216	ENST00000577001		Q6ZSN1	163 aa		10.96	□□□□□ -0.66
PRPF8-216	ENST00000577001	NDUFA7	O95182	113 aa		10.96	□□□□□ -0.66
PRPF8-216	ENST00000577001	HIGD1B	Q9P298	99 aa		10.96	□□□□□ -0.66
PRPF8-216	ENST00000577001	GAGE12H	A6NDE8	117 aa		10.95	□□□□□ -0.66
PRPF8-216	ENST00000577001	SNRPD3	P62318	126 aa	Known RBP	10.95	□□□□□ -0.66
PRPF8-216	ENST00000577001	USMG5	Q96IX5	58 aa		10.95	□□□□□ -0.66
PRPF8-216	ENST00000577001	PLA2G2A	P14555	144 aa		10.95	□□□□□ -0.66
PRPF8-216	ENST00000577001	PMVK	Q15126	192 aa		10.95	□□□□□ -0.66
PRPF8-216	ENST00000577001	SYT8	Q8NBV8	401 aa		10.95	□□□□□ -0.66
PRPF8-216	ENST00000577001	KIF25-AS1	Q9Y6Z4	181 aa		10.95	□□□□□ -0.66
PRPF8-216	ENST00000577001	SRSF2	Q01130	221 aa	Known RBP	10.94	□□□□□ -0.66
PRPF8-216	ENST00000577001	C19orf54	Q5BKX5	351 aa		10.94	□□□□□ -0.66
PRPF8-216	ENST00000577001		A4D1N5	150 aa		10.94	□□□□□ -0.66
PRPF8-216	ENST00000577001	VCY	O14598	125 aa		10.94	□□□□□ -0.66
PRPF8-216	ENST00000577001	SPINK8	P0C7L1	97 aa		10.94	□□□□□ -0.66
PRPF8-216	ENST00000577001	NFE4	Q86UQ8	179 aa		10.94	□□□□□ -0.66
PRPF8-216	ENST00000577001		J3QQQ9	107 aa		10.93	□□□□□ -0.66
PRPF8-216	ENST00000577001	CIDEA	O60543	219 aa		10.93	□□□□□ -0.66
PRPF8-216	ENST00000577001	TCL1B	O95988	128 aa		10.93	□□□□□ -0.66
PRPF8-216	ENST00000577001	SMCP	P49901	116 aa	Predicted RBP	10.93	□□□□□ -0.66
PRPF8-216	ENST00000577001	IGHV1OR15-1	A0A075B7D0	117 aa		10.93	□□□□□ -0.66
PRPF8-216	ENST00000577001		B4DSR2	109 aa		10.93	□□□□□ -0.66
PRPF8-216	ENST00000577001	ELANE	P08246	267 aa		10.93	□□□□□ -0.66
PRPF8-216	ENST00000577001	CD28	P10747	220 aa		10.93	□□□□□ -0.66
PRPF8-216	ENST00000577001	VCX2	Q9H322	139 aa		10.93	□□□□□ -0.66
PRPF8-216	ENST00000577001		A0A0J9YX75	114 aa		10.92	□□□□□ -0.66
PRPF8-216	ENST00000577001		A0A0J9YY99	117 aa		10.92	□□□□□ -0.66
PRPF8-216	ENST00000577001	MRPL53	Q96EL3	112 aa	Known RBP	10.92	□□□□□ -0.66
PRPF8-216	ENST00000577001	LINC01587	Q99440	93 aa		10.92	□□□□□ -0.66
PRPF8-216	ENST00000577001	IGHV4-4	A0A075B6R2	117 aa		10.92	□□□□□ -0.66
PRPF8-216	ENST00000577001	IGIP	A6NJ69	53 aa		10.92	□□□□□ -0.66
PRPF8-216	ENST00000577001	MUSTN1	Q8IVN3	82 aa		10.92	□□□□□ -0.66
PRPF8-216	ENST00000577001	CFC1B	P0CG36	223 aa		10.92	□□□□□ -0.66
PRPF8-216	ENST00000577001	CFC1	P0CG37	223 aa		10.92	□□□□□ -0.66
PRPF8-216	ENST00000577001	POLR2K	P53803	58 aa	Known RBP	10.92	□□□□□ -0.66
PRPF8-216	ENST00000577001		M0QY20	66 aa		10.91	□□□□□ -0.66
PRPF8-216	ENST00000577001	HERVK_113	P61574	105 aa		10.91	□□□□□ -0.66
PRPF8-216	ENST00000577001	SIGMAR1	Q99720	223 aa		10.91	□□□□□ -0.66
PRPF8-216	ENST00000577001	KLLN	B2CW77	178 aa		10.91	□□□□□ -0.66
PRPF8-216	ENST00000577001	NDUFS8	O00217	210 aa		10.91	□□□□□ -0.66
PRPF8-216	ENST00000577001	HELZ2	Q9BYK8	2649 aa	Known RBP	10.91	□□□□□ -0.66
PRPF8-216	ENST00000577001	IGLV1-40	P01703	118 aa		10.9	□□□□□ -0.66
PRPF8-216	ENST00000577001	TMEM61	Q8N0U2	210 aa		10.9	□□□□□ -0.66
PRPF8-216	ENST00000577001		C9JAW5	83 aa		10.9	□□□□□ -0.66
PRPF8-216	ENST00000577001	WFDC10A	Q9H1F0	79 aa		10.9	□□□□□ -0.66
PRPF8-216	ENST00000577001	LINC01546	A6NGU7	62 aa		10.9	□□□□□ -0.67
PRPF8-216	ENST00000577001	EIF4EBP3	O60516	100 aa	Predicted RBP	10.9	□□□□□ -0.67
PRPF8-216	ENST00000577001	PSMB8	P28062	276 aa		10.9	□□□□□ -0.67
PRPF8-216	ENST00000577001	UBR5	O95071	2799 aa	Predicted RBP	10.9	□□□□□ -0.67
PRPF8-216	ENST00000577001	TRAV12-1	A0A0B4J245	112 aa		10.89	□□□□□ -0.67
PRPF8-216	ENST00000577001		A0A1B0GV72	72 aa		10.89	□□□□□ -0.67
PRPF8-216	ENST00000577001	MT-ATP8	P03928	68 aa		10.89	□□□□□ -0.67
PRPF8-216	ENST00000577001	NDUFA11	Q86Y39	141 aa		10.89	□□□□□ -0.67
PRPF8-216	ENST00000577001	FHL3	Q13643	280 aa		10.88	□□□□□ -0.67
PRPF8-216	ENST00000577001	TNFRSF18	Q9Y5U5	241 aa		10.88	□□□□□ -0.67
PRPF8-216	ENST00000577001	PRORY	Q9H606	182 aa		10.88	□□□□□ -0.67
PRPF8-216	ENST00000577001	RBMY1B	A6NDE4	496 aa	Known RBP	10.87	□□□□□ -0.67
PRPF8-216	ENST00000577001	RBMY1E	A6NEQ0	496 aa	Known RBP	10.87	□□□□□ -0.67
PRPF8-216	ENST00000577001	RBMY1D	P0C7P1	496 aa	Known RBP	10.87	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms