RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 CLEC2BQ92478 149 aa10.92□□□□□ -0.66
SCARF1-209ENST00000576012 GAGE12JA6NER3 117 aa10.91□□□□□ -0.66
SCARF1-209ENST00000576012 ODF3BA8MYP8 253 aa10.91□□□□□ -0.66
SCARF1-209ENST00000576012 CCL21O00585 134 aa10.91□□□□□ -0.66
SCARF1-209ENST00000576012 GAGE7O76087 117 aa10.91□□□□□ -0.66
SCARF1-209ENST00000576012 GAGE12FP0CL80 117 aa10.91□□□□□ -0.66
SCARF1-209ENST00000576012 GAGE12GP0CL81 117 aa10.91□□□□□ -0.66
SCARF1-209ENST00000576012 GAGE12IP0CL82 117 aa10.91□□□□□ -0.66
SCARF1-209ENST00000576012 GAGE4Q13068 117 aa10.91□□□□□ -0.66
SCARF1-209ENST00000576012 LY6EQ16553 131 aa10.91□□□□□ -0.66
SCARF1-209ENST00000576012 TLN2Q9Y4G6 2542 aa10.91□□□□□ -0.66
SCARF1-209ENST00000576012 TRAV8-3A0A0A6YYJ7 113 aa10.91□□□□□ -0.66
SCARF1-209ENST00000576012 IGIPA6NJ69 53 aa10.91□□□□□ -0.66
SCARF1-209ENST00000576012 LINC01619G3V211 115 aa10.91□□□□□ -0.66
SCARF1-209ENST00000576012 IFITM1P13164 125 aa10.91□□□□□ -0.66
SCARF1-209ENST00000576012 TMEM190Q8WZ59 177 aa10.91□□□□□ -0.66
SCARF1-209ENST00000576012 IGHV4-4A0A075B6R2 117 aa10.9□□□□□ -0.66
SCARF1-209ENST00000576012 CSMD2Q7Z408 3487 aa10.9□□□□□ -0.66
SCARF1-209ENST00000576012 LINC01620Q4KN68 170 aa10.9□□□□□ -0.67
SCARF1-209ENST00000576012 C2orf82Q6UX34 121 aa10.9□□□□□ -0.67
SCARF1-209ENST00000576012 ACACBO00763 2458 aa10.9□□□□□ -0.67
SCARF1-209ENST00000576012 PTPN13Q12923 2485 aa10.9□□□□□ -0.67
SCARF1-209ENST00000576012 CHCHD5Q9BSY4 110 aa10.89□□□□□ -0.67
SCARF1-209ENST00000576012 CSDC2Q9Y534 153 aaKnown RBP10.89□□□□□ -0.67
SCARF1-209ENST00000576012 BRD3OSQ6XYD6 125 aa10.89□□□□□ -0.67
SCARF1-209ENST00000576012 KLK9Q9UKQ9 250 aa10.89□□□□□ -0.67
SCARF1-209ENST00000576012 CELSR2Q9HCU4 2923 aa10.89□□□□□ -0.67
SCARF1-209ENST00000576012 FLNCQ14315 2725 aa10.89□□□□□ -0.67
SCARF1-209ENST00000576012 RHODO00212 210 aa10.89□□□□□ -0.67
SCARF1-209ENST00000576012 TRIAP1O43715 76 aa10.88□□□□□ -0.67
SCARF1-209ENST00000576012 Q8N6K4 173 aa10.88□□□□□ -0.67
SCARF1-209ENST00000576012 VCYO14598 125 aa10.87□□□□□ -0.67
SCARF1-209ENST00000576012 WIPF1O43516 503 aa10.87□□□□□ -0.67
SCARF1-209ENST00000576012 MDFICQ9P1T7 246 aa10.87□□□□□ -0.67
SCARF1-209ENST00000576012 TMEM263Q8WUH6 116 aaKnown RBP10.87□□□□□ -0.67
SCARF1-209ENST00000576012 MEIG1Q5JSS6 88 aa10.87□□□□□ -0.67
SCARF1-209ENST00000576012 C9orf139Q6ZV77 190 aa10.87□□□□□ -0.67
SCARF1-209ENST00000576012 AMELXQ99217 191 aa10.87□□□□□ -0.67
SCARF1-209ENST00000576012 P0DMU3 169 aa10.86□□□□□ -0.67
SCARF1-209ENST00000576012 FAM231AP0DMU4 169 aa10.86□□□□□ -0.67
SCARF1-209ENST00000576012 FAM231CP0DMU5 169 aa10.86□□□□□ -0.67
SCARF1-209ENST00000576012 UBE2E1P51965 193 aa10.86□□□□□ -0.67
SCARF1-209ENST00000576012 ATXN8Q156A1 80 aa10.86□□□□□ -0.67
SCARF1-209ENST00000576012 M0R1W7 72 aa10.86□□□□□ -0.67
SCARF1-209ENST00000576012 PRM2P04554 102 aa10.86□□□□□ -0.67
SCARF1-209ENST00000576012 ODF3Q96PU9 254 aa10.86□□□□□ -0.67
SCARF1-209ENST00000576012 PRRC2AP48634 2157 aaKnown RBP10.86□□□□□ -0.67
SCARF1-209ENST00000576012 H3BMM0 161 aa10.85□□□□□ -0.67
SCARF1-209ENST00000576012 UBE2WQ96B02 151 aa10.85□□□□□ -0.67
SCARF1-209ENST00000576012 ZNF625Q96I27 306 aaPredicted RBP10.85□□□□□ -0.67
SCARF1-209ENST00000576012 LINC00315P59091 139 aa10.85□□□□□ -0.67
SCARF1-209ENST00000576012 ZNF876PQ49A33 203 aa10.85□□□□□ -0.67
SCARF1-209ENST00000576012 PAPPA-AS1Q5QFB9 102 aa10.85□□□□□ -0.67
SCARF1-209ENST00000576012 MYO9AB2RTY4 2548 aa10.85□□□□□ -0.67
SCARF1-209ENST00000576012 SBSPONQ8IVN8 264 aa10.85□□□□□ -0.67
SCARF1-209ENST00000576012 PIEZO1Q92508 2521 aa10.85□□□□□ -0.67
SCARF1-209ENST00000576012 TRAV41A0A0B4J266 112 aa10.84□□□□□ -0.67
SCARF1-209ENST00000576012 KNCNA6PVL3 124 aa10.84□□□□□ -0.67
SCARF1-209ENST00000576012 POLR2KP53803 58 aaKnown RBP10.84□□□□□ -0.67
SCARF1-209ENST00000576012 RHPN1-AS1Q9BWJ2 59 aa10.84□□□□□ -0.67
SCARF1-209ENST00000576012 ITLN2Q8WWU7 325 aaPredicted RBP10.84□□□□□ -0.67
SCARF1-209ENST00000576012 ADAMTSL4-AS1Q5T5F5 129 aa10.83□□□□□ -0.67
SCARF1-209ENST00000576012 TRBV7-1A0A0A6YYK4 115 aa10.83□□□□□ -0.68
SCARF1-209ENST00000576012 ZNF22P17026 224 aaPredicted RBP10.83□□□□□ -0.68
SCARF1-209ENST00000576012 F8WDY8 70 aa10.82□□□□□ -0.68
SCARF1-209ENST00000576012 K7ENP7 123 aa10.82□□□□□ -0.68
SCARF1-209ENST00000576012 PROK1P58294 105 aa10.82□□□□□ -0.68
SCARF1-209ENST00000576012 MINOS1Q5TGZ0 78 aa10.82□□□□□ -0.68
SCARF1-209ENST00000576012 USP9XQ93008 2570 aaPredicted RBP10.82□□□□□ -0.68
SCARF1-209ENST00000576012 A0A0J9YXY3 114 aa10.82□□□□□ -0.68
SCARF1-209ENST00000576012 OVOL1O14753 267 aa10.82□□□□□ -0.68
SCARF1-209ENST00000576012 DUX5Q96PT3 197 aa10.82□□□□□ -0.68
SCARF1-209ENST00000576012 KIF25-AS1Q9Y6Z4 181 aa10.82□□□□□ -0.68
SCARF1-209ENST00000576012 ITPR1Q14643 2758 aa10.82□□□□□ -0.68
SCARF1-209ENST00000576012 PKD1L2Q7Z442 2459 aa10.81□□□□□ -0.68
SCARF1-209ENST00000576012 TMEM223A0PJW6 202 aa10.81□□□□□ -0.68
SCARF1-209ENST00000576012 SPINK13Q1W4C9 94 aa10.81□□□□□ -0.68
SCARF1-209ENST00000576012 TMEM141Q96I45 108 aa10.81□□□□□ -0.68
SCARF1-209ENST00000576012 Q9UF83 564 aa10.81□□□□□ -0.68
SCARF1-209ENST00000576012 ZANQ9Y493 2812 aa10.81□□□□□ -0.68
SCARF1-209ENST00000576012 CENPVL3A0A0U1RRI6 287 aa10.81□□□□□ -0.68
SCARF1-209ENST00000576012 RS1O15537 224 aa10.81□□□□□ -0.68
SCARF1-209ENST00000576012 PPP1R17O96001 155 aa10.81□□□□□ -0.68
SCARF1-209ENST00000576012 IGHV3-30-3P0DP02 117 aa10.81□□□□□ -0.68
SCARF1-209ENST00000576012 CD28P10747 220 aa10.81□□□□□ -0.68
SCARF1-209ENST00000576012 LY6DQ14210 128 aa10.81□□□□□ -0.68
SCARF1-209ENST00000576012 MRPL23Q16540 153 aaKnown RBP10.8□□□□□ -0.68
SCARF1-209ENST00000576012 ABCA12Q86UK0 2595 aa10.8□□□□□ -0.68
SCARF1-209ENST00000576012 H7C423 109 aa10.8□□□□□ -0.68
SCARF1-209ENST00000576012 LEPROTO15243 131 aa10.8□□□□□ -0.68
SCARF1-209ENST00000576012 MRPL53Q96EL3 112 aaKnown RBP10.8□□□□□ -0.68
SCARF1-209ENST00000576012 TIMM21Q9BVV7 248 aa10.8□□□□□ -0.68
SCARF1-209ENST00000576012 IGHV1-69DA0A0B4J2H0 117 aa10.8□□□□□ -0.68
SCARF1-209ENST00000576012 SMIM9A6NGZ8 99 aa10.8□□□□□ -0.68
SCARF1-209ENST00000576012 EBI3Q14213 229 aa10.8□□□□□ -0.68
SCARF1-209ENST00000576012 MINOS1-NBL1R4GNA1 71 aa10.8□□□□□ -0.68
SCARF1-209ENST00000576012 U3KQE9 123 aa10.8□□□□□ -0.68
SCARF1-209ENST00000576012 WNK1Q9H4A3 2382 aa10.79□□□□□ -0.68
SCARF1-209ENST00000576012 LRRK2Q5S007 2527 aa10.79□□□□□ -0.68
SCARF1-209ENST00000576012 TIMM17AQ99595 171 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms