RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 H3BMM0 161 aa6.56□□□□□ -1.36
NCBP3-204ENST00000574911 J3QQQ9 107 aa6.56□□□□□ -1.36
NCBP3-204ENST00000574911 IGHV3-30P01768 117 aa6.56□□□□□ -1.36
NCBP3-204ENST00000574911 IGHV3-30-5P0DP03 117 aa6.56□□□□□ -1.36
NCBP3-204ENST00000574911 DEFB136Q30KP8 78 aa6.56□□□□□ -1.36
NCBP3-204ENST00000574911 GAGE13Q4V321 117 aa6.56□□□□□ -1.36
NCBP3-204ENST00000574911 Q5PR19 223 aa6.56□□□□□ -1.36
NCBP3-204ENST00000574911 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.55□□□□□ -1.361e-7■■■□□ 17
NCBP3-204ENST00000574911 IGLV4-3A0A075B6K6 122 aa6.55□□□□□ -1.36
NCBP3-204ENST00000574911 LEPROTO15243 131 aa6.55□□□□□ -1.36
NCBP3-204ENST00000574911 TSPAN13O95857 204 aa6.55□□□□□ -1.36
NCBP3-204ENST00000574911 SPAG8Q99932 426 aaPredicted RBP6.55□□□□□ -1.36
NCBP3-204ENST00000574911 MRPL16Q9NX20 251 aaKnown RBP6.55□□□□□ -1.36
NCBP3-204ENST00000574911 AGRNO00468 2067 aa6.55□□□□□ -1.36
NCBP3-204ENST00000574911 PRB1P04280 392 aa6.55□□□□□ -1.36
NCBP3-204ENST00000574911 PTH2Q96A98 100 aa6.55□□□□□ -1.36
NCBP3-204ENST00000574911 ZNF22P17026 224 aaPredicted RBP6.54□□□□□ -1.36
NCBP3-204ENST00000574911 LGALS3P17931 250 aaKnown RBP6.54□□□□□ -1.36
NCBP3-204ENST00000574911 KRTAP10-9P60411 292 aa6.54□□□□□ -1.36
NCBP3-204ENST00000574911 NDUFA11Q86Y39 141 aa6.54□□□□□ -1.36
NCBP3-204ENST00000574911 PYGO1Q9Y3Y4 419 aa6.54□□□□□ -1.36
NCBP3-204ENST00000574911 RHODO00212 210 aa6.54□□□□□ -1.36
NCBP3-204ENST00000574911 CIDEAO60543 219 aa6.54□□□□□ -1.36
NCBP3-204ENST00000574911 PROK1P58294 105 aa6.54□□□□□ -1.36
NCBP3-204ENST00000574911 PIK3CD-AS1Q5SR53 167 aa6.54□□□□□ -1.36
NCBP3-204ENST00000574911 FAM104AQ969W3 186 aa6.54□□□□□ -1.36
NCBP3-204ENST00000574911 PEMTQ9UBM1 199 aa6.54□□□□□ -1.36
NCBP3-204ENST00000574911 IGHV3-73A0A0B4J1V6 119 aa6.53□□□□□ -1.36
NCBP3-204ENST00000574911 A8MWV9 139 aa6.53□□□□□ -1.36
NCBP3-204ENST00000574911 M0R2P5 195 aa6.53□□□□□ -1.36
NCBP3-204ENST00000574911 UBE2D3P61077 147 aa6.53□□□□□ -1.36
NCBP3-204ENST00000574911 UBE2D2P62837 147 aa6.53□□□□□ -1.36
NCBP3-204ENST00000574911 DEFB113Q30KQ7 82 aa6.53□□□□□ -1.36
NCBP3-204ENST00000574911 C4orf3Q8WVX3 66 aa6.53□□□□□ -1.36
NCBP3-204ENST00000574911 DUX3Q96PT4 197 aa6.53□□□□□ -1.36
NCBP3-204ENST00000574911 VCX2Q9H322 139 aa6.53□□□□□ -1.36
NCBP3-204ENST00000574911 IGSF10Q6WRI0 2623 aa6.53□□□□□ -1.36
NCBP3-204ENST00000574911 A0A0J9YXV3 536 aa6.53□□□□□ -1.36
NCBP3-204ENST00000574911 APOMO95445 188 aa6.53□□□□□ -1.36
NCBP3-204ENST00000574911 CFC1BP0CG36 223 aa6.53□□□□□ -1.36
NCBP3-204ENST00000574911 CFC1P0CG37 223 aa6.53□□□□□ -1.36
NCBP3-204ENST00000574911 HTN1P15515 57 aa6.53□□□□□ -1.36
NCBP3-204ENST00000574911 SH2D6Q7Z4S9 175 aa6.53□□□□□ -1.36
NCBP3-204ENST00000574911 TMEM61Q8N0U2 210 aa6.53□□□□□ -1.36
NCBP3-204ENST00000574911 LRRC75A-AS1Q8N1F1 130 aa6.53□□□□□ -1.36
NCBP3-204ENST00000574911 DLX4Q92988 240 aaPredicted RBP6.53□□□□□ -1.36
NCBP3-204ENST00000574911 LINC00467Q9BRT7 94 aa6.53□□□□□ -1.36
NCBP3-204ENST00000574911 CSMD2Q7Z408 3487 aa6.53□□□□□ -1.36
NCBP3-204ENST00000574911 PRM2P04554 102 aa6.52□□□□□ -1.37
NCBP3-204ENST00000574911 ZNF415Q09FC8 603 aa6.52□□□□□ -1.37
NCBP3-204ENST00000574911 BBC3Q96PG8 261 aaPredicted RBP6.52□□□□□ -1.37
NCBP3-204ENST00000574911 MAP6D1Q9H9H5 199 aa6.52□□□□□ -1.37
NCBP3-204ENST00000574911 FBN2P35556 2912 aa6.52□□□□□ -1.37
NCBP3-204ENST00000574911 FLNCQ14315 2725 aa6.52□□□□□ -1.37
NCBP3-204ENST00000574911 CACNA1AO00555 2505 aa6.52□□□□□ -1.37
NCBP3-204ENST00000574911 CRYBA4P53673 196 aa6.52□□□□□ -1.37
NCBP3-204ENST00000574911 ETDBQ3ZM63 59 aa6.52□□□□□ -1.37
NCBP3-204ENST00000574911 Q6ZSN1 163 aa6.52□□□□□ -1.37
NCBP3-204ENST00000574911 MTURNQ8N3F0 131 aa6.52□□□□□ -1.37
NCBP3-204ENST00000574911 TNFRSF18Q9Y5U5 241 aa6.52□□□□□ -1.37
NCBP3-204ENST00000574911 USP9XQ93008 2570 aaPredicted RBP6.52□□□□□ -1.37
NCBP3-204ENST00000574911 CR1P17927 2039 aa6.52□□□□□ -1.37
NCBP3-204ENST00000574911 PIEZO1Q92508 2521 aa6.51□□□□□ -1.37
NCBP3-204ENST00000574911 CD28P10747 220 aa6.51□□□□□ -1.37
NCBP3-204ENST00000574911 CFAP126Q5VTH2 177 aa6.51□□□□□ -1.37
NCBP3-204ENST00000574911 UTP20O75691 2785 aaKnown RBP6.51□□□□□ -1.37
NCBP3-204ENST00000574911 SMCPP49901 116 aaPredicted RBP6.51□□□□□ -1.37
NCBP3-204ENST00000574911 DEFB114Q30KQ6 69 aa6.51□□□□□ -1.37
NCBP3-204ENST00000574911 C11orf72Q8NBR9 251 aa6.51□□□□□ -1.37
NCBP3-204ENST00000574911 LOC107984156A0A0G2JMH3 177 aa6.5□□□□□ -1.37
NCBP3-204ENST00000574911 J3QR89 54 aa6.5□□□□□ -1.37
NCBP3-204ENST00000574911 PSMB2P49721 201 aa6.5□□□□□ -1.37
NCBP3-204ENST00000574911 MRPS36P82909 103 aaKnown RBP6.5□□□□□ -1.37
NCBP3-204ENST00000574911 ARL17AQ8IVW1 177 aa6.5□□□□□ -1.37
NCBP3-204ENST00000574911 C10orf126Q8N4M7 172 aa6.5□□□□□ -1.37
NCBP3-204ENST00000574911 DYNLRB2Q8TF09 96 aa6.5□□□□□ -1.37
NCBP3-204ENST00000574911 Q96MF0 132 aa6.5□□□□□ -1.37
NCBP3-204ENST00000574911 CHCHD7Q9BUK0 85 aa6.5□□□□□ -1.37
NCBP3-204ENST00000574911 Q9UF83 564 aa6.5□□□□□ -1.37
NCBP3-204ENST00000574911 CRYBG3Q68DQ2 2970 aa6.5□□□□□ -1.37
NCBP3-204ENST00000574911 IGHV3-64A0A075B6Q5 118 aa6.5□□□□□ -1.37
NCBP3-204ENST00000574911 BEAN1Q3B7T3 259 aa6.5□□□□□ -1.37
NCBP3-204ENST00000574911 LYRM7Q5U5X0 104 aa6.5□□□□□ -1.37
NCBP3-204ENST00000574911 RAX2Q96IS3 184 aa6.5□□□□□ -1.37
NCBP3-204ENST00000574911 LINC01587Q99440 93 aa6.5□□□□□ -1.37
NCBP3-204ENST00000574911 SPG11Q96JI7 2443 aa6.5□□□□□ -1.37
NCBP3-204ENST00000574911 EIF4EBP3O60516 100 aaPredicted RBP6.49□□□□□ -1.37
NCBP3-204ENST00000574911 KRTAP1-3Q8IUG1 177 aa6.49□□□□□ -1.37
NCBP3-204ENST00000574911 ZNF843Q8N446 348 aa6.49□□□□□ -1.37
NCBP3-204ENST00000574911 ATP6V0E2Q8NHE4 81 aa6.49□□□□□ -1.37
NCBP3-204ENST00000574911 DNAJC30Q96LL9 226 aa6.49□□□□□ -1.37
NCBP3-204ENST00000574911 CLUHP3Q96NS8 147 aa6.49□□□□□ -1.37
NCBP3-204ENST00000574911 SPXQ9BT56 116 aa6.49□□□□□ -1.37
NCBP3-204ENST00000574911 PRO1854Q9UHT4 67 aa6.49□□□□□ -1.37
NCBP3-204ENST00000574911 TSSC4Q9Y5U2 329 aaPredicted RBP6.49□□□□□ -1.37
NCBP3-204ENST00000574911 RS1O15537 224 aa6.49□□□□□ -1.37
NCBP3-204ENST00000574911 INSP01308 110 aa6.49□□□□□ -1.37
NCBP3-204ENST00000574911 CEMP1Q6PRD7 247 aaPredicted RBP6.49□□□□□ -1.37
NCBP3-204ENST00000574911 SFTA2Q6UW10 78 aa6.49□□□□□ -1.37
NCBP3-204ENST00000574911 TMEM86BQ8N661 226 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms