RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 KIR2DL4Q99706 377 aa17.28■□□□□ 0.36
NPLOC4-217ENST00000574897 C16orf95Q9H693 158 aa17.28■□□□□ 0.36
NPLOC4-217ENST00000574897 CYSLTR1Q9Y271 337 aa17.28■□□□□ 0.36
NPLOC4-217ENST00000574897 TRBV27A0A0K0K1C4 114 aa17.27■□□□□ 0.36
NPLOC4-217ENST00000574897 P0DMU3 169 aa17.27■□□□□ 0.36
NPLOC4-217ENST00000574897 FAM231AP0DMU4 169 aa17.27■□□□□ 0.36
NPLOC4-217ENST00000574897 FAM231CP0DMU5 169 aa17.27■□□□□ 0.36
NPLOC4-217ENST00000574897 PRSS29PA6NIE9 313 aa17.26■□□□□ 0.35
NPLOC4-217ENST00000574897 GAGE1Q13065 139 aa17.26■□□□□ 0.35
NPLOC4-217ENST00000574897 LINC01587Q99440 93 aa17.26■□□□□ 0.35
NPLOC4-217ENST00000574897 XCL2Q9UBD3 114 aa17.26■□□□□ 0.35
NPLOC4-217ENST00000574897 PLNP26678 52 aa17.25■□□□□ 0.35
NPLOC4-217ENST00000574897 MAPKAPK5-AS1Q8N8E1 139 aa17.25■□□□□ 0.35
NPLOC4-217ENST00000574897 ORAOV1Q8WV07 137 aa17.25■□□□□ 0.35
NPLOC4-217ENST00000574897 TRPT1Q86TN4 253 aaKnown RBP17.24■□□□□ 0.35
NPLOC4-217ENST00000574897 TRAV8-6A0A0B4J262 113 aa17.24■□□□□ 0.35
NPLOC4-217ENST00000574897 IGIPA6NJ69 53 aa17.24■□□□□ 0.35
NPLOC4-217ENST00000574897 HILS1P60008 231 aa17.24■□□□□ 0.35
NPLOC4-217ENST00000574897 Q9UF83 564 aa17.24■□□□□ 0.35
NPLOC4-217ENST00000574897 SIVA1O15304 175 aa17.23■□□□□ 0.35
NPLOC4-217ENST00000574897 EMP1P54849 157 aa17.23■□□□□ 0.35
NPLOC4-217ENST00000574897 ZNF418Q8TF45 676 aaPredicted RBP17.23■□□□□ 0.35
NPLOC4-217ENST00000574897 OTOGQ6ZRI0 2925 aa17.23■□□□□ 0.35
NPLOC4-217ENST00000574897 C11orf72Q8NBR9 251 aa17.23■□□□□ 0.35
NPLOC4-217ENST00000574897 TRAV25A0A0B4J276 109 aa17.22■□□□□ 0.35
NPLOC4-217ENST00000574897 INSP01308 110 aa17.22■□□□□ 0.35
NPLOC4-217ENST00000574897 IGHV3OR16-12A0A075B7B8 117 aa17.22■□□□□ 0.35
NPLOC4-217ENST00000574897 M0R2P5 195 aa17.22■□□□□ 0.35
NPLOC4-217ENST00000574897 AZU1P20160 251 aa17.22■□□□□ 0.35
NPLOC4-217ENST00000574897 ZNF415Q09FC8 603 aa17.22■□□□□ 0.35
NPLOC4-217ENST00000574897 NSUN5P1Q3KNT7 163 aa17.22■□□□□ 0.35
NPLOC4-217ENST00000574897 RIPPLY3P57055 190 aa17.21■□□□□ 0.35
NPLOC4-217ENST00000574897 HSD52Q0P140 79 aa17.21■□□□□ 0.35
NPLOC4-217ENST00000574897 Q6ZSN1 163 aa17.21■□□□□ 0.35
NPLOC4-217ENST00000574897 STHQ8IWL8 128 aa17.21■□□□□ 0.35
NPLOC4-217ENST00000574897 MRPL16Q9NX20 251 aaKnown RBP17.21■□□□□ 0.35
NPLOC4-217ENST00000574897 TRBV25-1A0A075B6N4 114 aa17.21■□□□□ 0.34
NPLOC4-217ENST00000574897 ADARB2-AS1A8MUL3 147 aa17.21■□□□□ 0.34
NPLOC4-217ENST00000574897 SAP30O75446 220 aa17.21■□□□□ 0.34
NPLOC4-217ENST00000574897 OR11H12B2RN74 326 aa17.2■□□□□ 0.34
NPLOC4-217ENST00000574897 OPRPNQ99935 248 aaPredicted RBP17.2■□□□□ 0.34
NPLOC4-217ENST00000574897 WFDC10AQ9H1F0 79 aa17.2■□□□□ 0.34
NPLOC4-217ENST00000574897 K7EP13 123 aa17.2■□□□□ 0.34
NPLOC4-217ENST00000574897 UFSP1Q6NVU6 142 aa17.19■□□□□ 0.34
NPLOC4-217ENST00000574897 JMJD8Q96S16 334 aa17.19■□□□□ 0.34
NPLOC4-217ENST00000574897 CCL25O15444 150 aa17.18■□□□□ 0.34
NPLOC4-217ENST00000574897 CHAC1Q9BUX1 264 aa17.18■□□□□ 0.34
NPLOC4-217ENST00000574897 C1orf158Q8N1D5 194 aa17.18■□□□□ 0.34
NPLOC4-217ENST00000574897 IGLV4-69A0A075B6H9 119 aa17.17■□□□□ 0.34
NPLOC4-217ENST00000574897 LY6G6DO95868 133 aa17.17■□□□□ 0.34
NPLOC4-217ENST00000574897 SEC11AP67812 179 aa17.17■□□□□ 0.34
NPLOC4-217ENST00000574897 CFAP126Q5VTH2 177 aa17.17■□□□□ 0.34
NPLOC4-217ENST00000574897 C11orf86A6NJI1 115 aa17.16■□□□□ 0.34
NPLOC4-217ENST00000574897 A8MWV9 139 aa17.15■□□□□ 0.34
NPLOC4-217ENST00000574897 I3L3M4 83 aa17.15■□□□□ 0.34
NPLOC4-217ENST00000574897 KRTAP10-3P60369 221 aa17.15■□□□□ 0.34
NPLOC4-217ENST00000574897 SCGB2A2Q13296 93 aa17.15■□□□□ 0.34
NPLOC4-217ENST00000574897 PMVKQ15126 192 aa17.15■□□□□ 0.34
NPLOC4-217ENST00000574897 VAMP3Q15836 100 aa17.15■□□□□ 0.34
NPLOC4-217ENST00000574897 TIMM17AQ99595 171 aa17.15■□□□□ 0.34
NPLOC4-217ENST00000574897 CST9LQ9H4G1 147 aa17.15■□□□□ 0.34
NPLOC4-217ENST00000574897 HIGD1BQ9P298 99 aa17.15■□□□□ 0.34
NPLOC4-217ENST00000574897 FN1P02751 2386 aaKnown RBP17.15■□□□□ 0.34
NPLOC4-217ENST00000574897 CLUHP3Q96NS8 147 aa17.14■□□□□ 0.33
NPLOC4-217ENST00000574897 GCSHP23434 173 aa17.14■□□□□ 0.33
NPLOC4-217ENST00000574897 PTTG1IPP53801 180 aa17.14■□□□□ 0.33
NPLOC4-217ENST00000574897 TMEM141Q96I45 108 aa17.14■□□□□ 0.33
NPLOC4-217ENST00000574897 LINC00467Q9BRT7 94 aa17.14■□□□□ 0.33
NPLOC4-217ENST00000574897 FXYD2P54710 66 aa17.13■□□□□ 0.33
NPLOC4-217ENST00000574897 RHOHQ15669 191 aa17.13■□□□□ 0.33
NPLOC4-217ENST00000574897 NAA38Q9BRA0 125 aaKnown RBP17.13■□□□□ 0.33
NPLOC4-217ENST00000574897 UBE2V1Q13404 147 aa17.13■□□□□ 0.33
NPLOC4-217ENST00000574897 C20orf203Q8NBC4 194 aa17.13■□□□□ 0.33
NPLOC4-217ENST00000574897 OR11H2Q8NH07 326 aa17.12■□□□□ 0.33
NPLOC4-217ENST00000574897 PRADC1Q9BSG0 188 aa17.12■□□□□ 0.33
NPLOC4-217ENST00000574897 NSD1Q96L73 2696 aaPredicted RBP17.11■□□□□ 0.33
NPLOC4-217ENST00000574897 NDUFA7O95182 113 aa17.11■□□□□ 0.33
NPLOC4-217ENST00000574897 IGLV1-51P01701 117 aa17.11■□□□□ 0.33
NPLOC4-217ENST00000574897 RAB37Q96AX2 223 aa17.11■□□□□ 0.33
NPLOC4-217ENST00000574897 EDA2RQ9HAV5 297 aa17.11■□□□□ 0.33
NPLOC4-217ENST00000574897 C2CD3Q4AC94 2353 aa17.1■□□□□ 0.33
NPLOC4-217ENST00000574897 AMMECR1LQ6DCA0 310 aa17.1■□□□□ 0.33
NPLOC4-217ENST00000574897 ZNRF2Q8NHG8 242 aa17.1■□□□□ 0.33
NPLOC4-217ENST00000574897 A6NDN8 102 aa17.1■□□□□ 0.33
NPLOC4-217ENST00000574897 LINC01549A6NIU2 74 aa17.09■□□□□ 0.33
NPLOC4-217ENST00000574897 E9PLD3 99 aa17.09■□□□□ 0.33
NPLOC4-217ENST00000574897 BEAN1Q3B7T3 259 aa17.09■□□□□ 0.33
NPLOC4-217ENST00000574897 SPXQ9BT56 116 aa17.09■□□□□ 0.33
NPLOC4-217ENST00000574897 TNFRSF18Q9Y5U5 241 aa17.09■□□□□ 0.33
NPLOC4-217ENST00000574897 GIG44P09565 113 aaPredicted RBP17.09■□□□□ 0.33
NPLOC4-217ENST00000574897 VWFP04275 2813 aa17.09■□□□□ 0.33
NPLOC4-217ENST00000574897 PIK3CD-AS1Q5SR53 167 aa17.08■□□□□ 0.33
NPLOC4-217ENST00000574897 PTH2Q96A98 100 aa17.08■□□□□ 0.33
NPLOC4-217ENST00000574897 RPL35AP18077 110 aaKnown RBP17.08■□□□□ 0.32
NPLOC4-217ENST00000574897 C19orf73Q9NVV2 129 aa17.08■□□□□ 0.32
NPLOC4-217ENST00000574897 IGHV3-38A0A0C4DH36 116 aa17.07■□□□□ 0.32
NPLOC4-217ENST00000574897 MYMXA0A1B0GTQ4 84 aa17.07■□□□□ 0.32
NPLOC4-217ENST00000574897 CEMP1Q6PRD7 247 aaPredicted RBP17.07■□□□□ 0.32
NPLOC4-217ENST00000574897 TRGV1A0A0A0MS02 117 aa17.06■□□□□ 0.32
NPLOC4-217ENST00000574897 RS1O15537 224 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms